iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121122

Ensembl Protein ID

EOY05879

UniProt Accession

A0A061EUB8; A0A061EUB8_THECC

Genbank Protein ID

EOY05879.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM001882

Gene Name

TCM_020770

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_020770	EOY05879	EOY05879

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.80e-21	77.0	96	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           + vkvs++g+++++++dl++++++++Ll+a++  ++          ++k+s++a++YeD+dGD++ l++D+++d++v+      s++rl+i+k
   Q: 96   IYVKVSMDGAPYLRKIDLKVYTGYAELLQALENmFKftigeysereGYKGSDYAPTYEDKDGDWM-LVGDVPWDMFVT------SCKRLRIMK 181
           78*******************************7336699999**9*******************.************......********8 PP

Organism

Theobroma cacao

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEGSVAYEND LNLKATELRL GLPGTDEREE QSVSNVRNKK RPLQDADEEF GANGKSDAQN 60
ETAPPAKAQI VGWPPIRSYR KNNFQPKKSE SDGPGIYVKV SMDGAPYLRK IDLKVYTGYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCACAAACT CCAAACATTT TCGTTTCTCT CAAACTTTTT GCGTCGTCAA AGGAACTACA 60
AGAACTTTTC TGAACTCAGA CCTTAGACAG CATCAGGTCG CATTCATCTC TACATTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	48.10	9.00e-43	165.00
IUUC-Atr-002618	Amborella trichopoda	59.80	3.00e-62	229.00
IUUC-Aly-006269	Arabidopsis lyrata	68.75	9.00e-73	265.00
IUUC-Ath-007238	Arabidopsis thaliana	69.27	8.00e-72	261.00
IUUC-Bdi-014020	Brachypodium distachyon	52.00	2.00e-40	157.00
IUUC-Bol-015312	Brassica oleracea	66.15	2.00e-72	263.00
IUUC-Bra-018063	Brassica rapa	65.64	9.00e-72	261.00
IUUC-Gma-043277	Glycine max	74.23	9.00e-81	291.00
IUUC-Lpe-051475	Leersia perrieri	46.73	5.00e-41	159.00
IUUC-Mcc-055347	Macaca mulatta	34.38	6.70e-01	26.20
IUUC-Mtr-058760	Medicago truncatula	70.53	6.00e-72	262.00
IUUC-Ont-072261	Oreochromis niloticus	30.19	8.60e-01	26.90
IUUC-Obr-076144	Oryza brachyantha	48.84	2.00e-42	164.00
IUUC-Ogl-077720	Oryza glaberrima	46.67	1.00e-41	161.00
IUUC-Opu-083449	Oryza punctata	45.65	2.00e-37	148.00
IUUC-Pop-100018	Populus trichocarpa	77.60	1.00e-83	301.00
IUUC-Ppe-101322	Prunus persica	73.85	1.00e-78	284.00
IUUC-Ptt-103794	Puccinia triticina	45.45	2.00e-01	30.40
IUUC-Sit-109841	Setaria italica	55.12	6.00e-50	189.00
IUUC-Sbi-114105	Sorghum bicolor	48.98	6.00e-43	166.00
IUUC-Tae-124584	Triticum aestivum	48.04	3.00e-43	167.00
IUUC-Vda-129817	Verticillium dahliae	27.45	6.40e-01	26.90

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence