iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040466

Ensembl Protein ID

ENSGALP00000021168.5

UniProt Accession

F1NN75; F1NN75_CHICK

Genbank Protein ID

ENSGALP00000021168

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04000024

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000012986.5	ENSGALT00000021199.5	ENSGALP00000021168.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.20e-18	67.3	294	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vCl+Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 294  VCLFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 341
           8*********88.6*******************.*******7.******75 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MAGGGGSRYA AEFLPPPECP VFEPSWEEFA DPFAFIGRIR GLAEKTGICK IRPPKDWQPP 60
FACEVQSFRF TPRIQRLNEL EAMTRVKLDF LDQLAKFWEL QGSNLKIPVV ERKILDLYGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGGG GCGGCGGGTC GCGCTACGCG GCCGAGTTCC TGCCCCCGCC CGAGTGCCCC 60
GTCTTCGAGC CCAGCTGGGA GGAGTTCGCC GACCCCTTCG CCTTCATCGG CCGCATCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	90.91	0.00e+00	2805.00
IUUC-Atr-002595	Amborella trichopoda	30.93	2.00e-123	437.00
IUUC-Apl-004141	Anas platyrhynchos	97.82	0.00e+00	2995.00
IUUC-Aca-004952	Anolis carolinensis	91.61	0.00e+00	2900.00
IUUC-Afl-008625	Aspergillus flavus	29.95	1.00e-114	408.00
IUUC-Afu-008796	Aspergillus fumigatus	29.49	2.00e-117	417.00
IUUC-Aor-010155	Aspergillus oryzae	29.95	1.00e-114	408.00
IUUC-Ate-010453	Aspergillus terreus	29.89	7.00e-114	405.00
IUUC-Ame-011323	Astyanax mexicanus	78.86	0.00e+00	1958.00
IUUC-Bta-012902	Bos taurus	89.99	0.00e+00	2836.00
IUUC-Cja-018988	Callithrix jacchus	90.08	0.00e+00	2659.00
IUUC-Cfa-020212	Canis familiaris	89.98	0.00e+00	2766.00
IUUC-Cpo-022221	Cavia porcellus	91.22	0.00e+00	2001.00
IUUC-Csa-023575	Chlorocebus sabaeus	91.99	0.00e+00	2753.00
IUUC-Cho-024280	Choloepus hoffmanni	86.46	0.00e+00	2588.00
IUUC-Cin-025321	Ciona intestinalis	49.15	0.00e+00	1088.00
IUUC-Csv-026185	Ciona savignyi	47.29	0.00e+00	1169.00
IUUC-Dre-027909	Danio rerio	76.16	0.00e+00	1671.00
IUUC-Dno-029473	Dasypus novemcinctus	91.63	0.00e+00	2607.00
IUUC-Dor-030281	Dipodomys ordii	90.04	0.00e+00	1197.00
IUUC-Dse-031479	Dothistroma septosporum	31.02	9.00e-106	379.00
IUUC-Dme-032021	Drosophila melanogaster	45.96	0.00e+00	1115.00
IUUC-Eca-034265	Equus caballus	89.82	0.00e+00	2825.00
IUUC-Eeu-034692	Erinaceus europaeus	58.30	0.00e+00	1119.00
IUUC-Fca-035476	Felis catus	89.80	0.00e+00	2798.00
IUUC-Fal-037078	Ficedula albicollis	96.74	0.00e+00	2647.00
IUUC-Gmo-039140	Gadus morhua	53.77	0.00e+00	1350.00
IUUC-Gac-042566	Gasterosteus aculeatus	72.97	0.00e+00	2173.00
IUUC-Ggo-044524	Gorilla gorilla	84.87	0.00e+00	2389.00
IUUC-Hsa-045821	Homo sapiens	91.15	0.00e+00	2834.00
IUUC-Kpa-049245	Komagataella pastoris	22.02	5.00e-37	150.00
IUUC-Lch-050630	Latimeria chalumnae	75.38	0.00e+00	2153.00
IUUC-Lpe-051537	Leersia perrieri	30.98	1.00e-88	322.00
IUUC-Loc-051963	Lepisosteus oculatus	75.81	0.00e+00	2094.00
IUUC-Laf-053918	Loxodonta africana	84.51	0.00e+00	2442.00
IUUC-Mcc-055672	Macaca mulatta	90.73	0.00e+00	2853.00
IUUC-Meu-056643	Macropus eugenii	55.66	0.00e+00	1348.00
IUUC-Mor-057198	Magnaporthe oryzae	30.03	3.00e-117	417.00
IUUC-Mtr-058113	Medicago truncatula	31.24	1.00e-93	338.00
IUUC-Mga-059192	Meleagris gallopavo	89.73	0.00e+00	2638.00
IUUC-Mmr-060968	Microcebus murinus	90.20	0.00e+00	2837.00
IUUC-Mdo-062945	Monodelphis domestica	92.18	0.00e+00	2747.00
IUUC-Mmu-063614	Mus musculus	89.98	0.00e+00	2818.00
IUUC-Mpu-066349	Mustela putorius furo	90.90	0.00e+00	2711.00
IUUC-Mlu-067363	Myotis lucifugus	90.33	0.00e+00	2867.00
IUUC-Nle-070142	Nomascus leucogenys	91.15	0.00e+00	2848.00
IUUC-Opr-071002	Ochotona princeps	85.33	0.00e+00	1351.00
IUUC-Ont-072471	Oreochromis niloticus	78.53	0.00e+00	1916.00
IUUC-Oan-072797	Ornithorhynchus anatinus	78.12	0.00e+00	2019.00
IUUC-Ocu-074164	Oryctolagus cuniculus	89.93	0.00e+00	2883.00
IUUC-Obr-076296	Oryza brachyantha	35.01	2.00e-95	345.00
IUUC-Ola-087076	Oryzias latipes	74.78	0.00e+00	2112.00
IUUC-Oga-088350	Otolemur garnettii	88.98	0.00e+00	2750.00
IUUC-Oar-090045	Ovis aries	90.15	0.00e+00	2834.00
IUUC-Ptr-091199	Pan troglodytes	90.56	0.00e+00	2821.00
IUUC-Pan-092094	Papio anubis	86.42	0.00e+00	2776.00
IUUC-Psi-093550	Pelodiscus sinensis	93.12	0.00e+00	2845.00
IUUC-Pma-094137	Petromyzon marinus	53.29	0.00e+00	1308.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.35	1.00e-117	418.00
IUUC-Pfo-097266	Poecilia formosa	75.10	0.00e+00	2140.00
IUUC-Pab-098576	Pongo abelii	91.27	0.00e+00	2834.00
IUUC-Pca-100123	Procavia capensis	89.28	0.00e+00	1594.00
IUUC-Pva-103109	Pteropus vampyrus	85.46	0.00e+00	2653.00
IUUC-Pte-104195	Pyrenophora teres	29.34	7.00e-122	432.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	29.76	7.00e-124	439.00
IUUC-Rno-105664	Rattus norvegicus	90.21	0.00e+00	2816.00
IUUC-Sha-107506	Sarcophilus harrisii	90.75	0.00e+00	2506.00
IUUC-Sja-107734	Schizosaccharomyces japonicus	21.05	2.00e-34	141.00
IUUC-Spo-108283	Schizosaccharomyces pombe	22.58	3.00e-54	207.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	1.00e-10	62.00
IUUC-Sit-110534	Setaria italica	30.36	8.00e-117	415.00
IUUC-Sar-113052	Sorex araneus	89.86	0.00e+00	2802.00
IUUC-Sre-115161	Sporisorium reilianum	28.99	2.00e-123	437.00
IUUC-Ssc-116354	Sus scrofa	57.00	0.00e+00	1427.00
IUUC-Tgu-116613	Taeniopygia guttata	96.35	0.00e+00	2986.00
IUUC-Tru-118604	Takifugu rubripes	75.07	0.00e+00	2169.00
IUUC-Tni-120779	Tetraodon nigroviridis	75.05	0.00e+00	2154.00
IUUC-Tre-122213	Trichoderma reesei	29.63	6.00e-114	405.00
IUUC-Tvi-122263	Trichoderma virens	29.23	6.00e-110	392.00
IUUC-Tme-127087	Tuber melanosporum	34.11	7.00e-120	426.00
IUUC-Tbe-127627	Tupaia belangeri	95.96	0.00e+00	793.00
IUUC-Ttr-129242	Tursiops truncatus	88.69	0.00e+00	2734.00
IUUC-Uma-129590	Ustilago maydis	29.14	4.00e-131	463.00
IUUC-Vpa-130429	Vicugna pacos	85.18	0.00e+00	1399.00
IUUC-Xtr-131762	Xenopus tropicalis	76.19	0.00e+00	2155.00
IUUC-Xma-133693	Xiphophorus maculatus	75.27	0.00e+00	2160.00
IUUC-Zma-135829	Zea mays	28.99	1.00e-114	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence