iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058343

Ensembl Protein ID

KEH32863

UniProt Accession

I3T146; I3T146_MEDTR

Genbank Protein ID

AFK46238.1; KEH32863.1

Protein Name

COP9 signalosome complex subunit 6a

Genbank Nucleotide ID

BT146444; CM001219

Gene Name

MTR_3g009270

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g009270	KEH32863	KEH32863

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	40.51	6.00e-60	228.00	IUUC-Dre-028843

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASSSSSGLT FKLHPLVIVN ISDHYTRVKS QMNPTLAPHN NATNNGGDGV VSSLPPPRVF 60
GCVIGVQKGR TVEIFNSFEL LYDPSTHSLD RPFLEKKQEL YKKVFPHFYI LGWYSTGSDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAGACA AAAAATACAC ACATTGTTAT TCGCTCCCCC TCTCCTTCAG TGATATACAA 60
CGCTACAATT CTCTTCCTCT TTCTGAAACC CTAATTTCTG ATTCAATTTC AATCGTTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000555--JAMM/MPN+_dom
IPR033859--MPN_CSN6
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0008180--C:COP9 signalosome
GO:0000338--P:protein deneddylation

KEGG

mtr:MTR_3g009270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000900	Aegilops tauschii	70.15	6.00e-127	446.00
IUUC-Aml-001678	Ailuropoda melanoleuca	40.32	9.00e-59	219.00
IUUC-Atr-002442	Amborella trichopoda	77.78	3.00e-113	400.00
IUUC-Aca-004366	Anolis carolinensis	33.48	6.00e-31	126.00
IUUC-Aly-005748	Arabidopsis lyrata	81.56	9.00e-148	515.00
IUUC-Ath-006830	Arabidopsis thaliana	81.25	1.00e-146	511.00
IUUC-Acl-008087	Aspergillus clavatus	25.81	4.00e-18	84.70
IUUC-Afl-008629	Aspergillus flavus	24.09	2.00e-10	59.70
IUUC-Afu-008973	Aspergillus fumigatus	27.47	1.00e-21	96.70
IUUC-Ani-009239	Aspergillus nidulans	29.49	3.00e-15	75.50
IUUC-Ang-009845	Aspergillus niger	27.17	8.00e-21	94.00
IUUC-Aor-010137	Aspergillus oryzae	24.93	5.00e-14	71.60
IUUC-Ate-010588	Aspergillus terreus	28.82	4.00e-14	71.60
IUUC-Ame-011532	Astyanax mexicanus	40.23	3.00e-18	82.00
IUUC-Bgr-012126	Blumeria graminis	27.03	2.00e-10	59.30
IUUC-Bta-012891	Bos taurus	40.32	9.00e-59	219.00
IUUC-Bci-013650	Botrytis cinerea	26.61	1.00e-19	90.10
IUUC-Bdi-014189	Brachypodium distachyon	76.59	3.00e-128	450.00
IUUC-Bol-015194	Brassica oleracea	77.12	7.00e-141	492.00
IUUC-Bra-017180	Brassica rapa	80.19	9.00e-146	508.00
IUUC-Cel-018511	Caenorhabditis elegans	25.94	6.00e-23	101.00
IUUC-Cja-019862	Callithrix jacchus	40.32	6.00e-59	220.00
IUUC-Cfa-020552	Canis familiaris	40.32	1.00e-58	219.00
IUUC-Cpo-022433	Cavia porcellus	40.32	7.00e-59	220.00
IUUC-Cre-022699	Chlamydomonas reinhardtii	42.50	9.00e-62	229.00
IUUC-Csa-023484	Chlorocebus sabaeus	40.32	5.00e-59	220.00
IUUC-Cho-024874	Choloepus hoffmanni	38.58	1.00e-38	152.00
IUUC-Cin-025747	Ciona intestinalis	38.91	1.00e-54	206.00
IUUC-Csv-025914	Ciona savignyi	36.13	6.00e-52	196.00
IUUC-Cgl-026665	Colletotrichum gloeosporioides	27.25	1.00e-18	87.00
IUUC-Cne-026818	Cryptococcus neoformans	34.08	5.00e-45	174.00
IUUC-Dre-028843	Danio rerio	40.51	2.00e-66	245.00
IUUC-Dno-029674	Dasypus novemcinctus	40.32	7.00e-59	219.00
IUUC-Dme-032196	Drosophila melanogaster	37.94	2.00e-58	218.00
IUUC-Ete-032593	Echinops telfairi	31.60	3.00e-18	84.30
IUUC-Eca-033933	Equus caballus	40.32	4.00e-59	220.00
IUUC-Fca-035946	Felis catus	40.32	1.00e-58	219.00
IUUC-Fso-038175	Fusarium solani	24.57	2.00e-15	76.30
IUUC-Gmo-038747	Gadus morhua	40.19	2.00e-60	225.00
IUUC-Gac-042199	Gasterosteus aculeatus	39.87	2.00e-59	221.00
IUUC-Gma-043702	Glycine max	92.24	7.00e-161	558.00
IUUC-Ggo-044978	Gorilla gorilla	40.00	3.00e-58	218.00
IUUC-Hsa-045797	Homo sapiens	40.00	2.00e-58	218.00
IUUC-Hvu-047511	Hordeum vulgare	74.92	8.00e-133	466.00
IUUC-Itr-048615	Ictidomys tridecemlineatus	40.32	4.00e-59	220.00
IUUC-Lch-049546	Latimeria chalumnae	39.19	4.00e-52	197.00
IUUC-Lpe-051207	Leersia perrieri	75.96	7.00e-133	465.00
IUUC-Loc-052106	Lepisosteus oculatus	40.65	1.00e-60	225.00
IUUC-Lma-053122	Leptosphaeria maculans	25.58	2.00e-17	83.20
IUUC-Laf-054454	Loxodonta africana	40.32	9.00e-59	219.00
IUUC-Mcc-054679	Macaca mulatta	40.32	1.00e-58	219.00
IUUC-Meu-056427	Macropus eugenii	39.35	4.00e-56	210.00
IUUC-Mor-057093	Magnaporthe oryzae	21.98	6.00e-11	61.20
IUUC-Mla-059002	Melampsora laricipopulina	36.09	1.00e-37	149.00
IUUC-Mvi-060487	Microbotryum violaceum	35.29	6.00e-53	200.00
IUUC-Mmr-060577	Microcebus murinus	40.32	8.00e-59	219.00
IUUC-Mdo-061918	Monodelphis domestica	40.32	9.00e-59	219.00
IUUC-Mmu-063355	Mus musculus	40.32	1.00e-58	219.00
IUUC-Mac-064465	Musa acuminata	79.00	2.00e-143	500.00
IUUC-Mpu-066813	Mustela putorius furo	40.32	9.00e-59	219.00
IUUC-Mlu-067500	Myotis lucifugus	40.32	7.00e-59	220.00
IUUC-Nfi-068452	Neosartorya fischeri	28.27	2.00e-22	99.80
IUUC-Nle-070166	Nomascus leucogenys	40.32	9.00e-59	219.00
IUUC-Opr-071028	Ochotona princeps	40.32	7.00e-59	219.00
IUUC-Ont-072575	Oreochromis niloticus	40.84	4.00e-61	227.00
IUUC-Ocu-074744	Oryctolagus cuniculus	40.32	6.00e-59	220.00
IUUC-Oba-075665	Oryza barthii	75.56	4.00e-131	460.00
IUUC-Obr-076094	Oryza brachyantha	79.84	3.00e-115	407.00
IUUC-Ogl-077223	Oryza glaberrima	75.56	4.00e-131	460.00
IUUC-Ogu-077975	Oryza glumaepatula	75.56	4.00e-131	460.00
IUUC-Oin-079690	Oryza indica	74.28	1.00e-126	444.00
IUUC-Ome-081114	Oryza meridionalis	75.88	6.00e-130	456.00
IUUC-Oni-082275	Oryza nivara	75.24	4.00e-129	453.00
IUUC-Opu-083281	Oryza punctata	75.56	5.00e-130	456.00
IUUC-Oru-084767	Oryza rufipogon	75.56	1.00e-129	455.00
IUUC-Osa-085506	Oryza sativa	75.56	1.00e-129	455.00
IUUC-Ola-086468	Oryzias latipes	40.51	7.00e-61	226.00
IUUC-Oga-088732	Otolemur garnettii	40.32	1.00e-58	219.00
IUUC-Oar-089714	Ovis aries	40.32	2.00e-58	218.00
IUUC-Ptr-091383	Pan troglodytes	40.00	2.00e-58	218.00
IUUC-Pan-091752	Papio anubis	40.32	5.00e-59	220.00
IUUC-Psi-094080	Pelodiscus sinensis	39.35	6.00e-62	230.00
IUUC-Ppa-095312	Physcomitrella patens	73.02	1.00e-134	471.00
IUUC-Pfo-096180	Poecilia formosa	40.51	2.00e-61	228.00
IUUC-Pab-098521	Pongo abelii	40.32	7.00e-59	219.00
IUUC-Pop-099014	Populus trichocarpa	85.85	9.00e-154	535.00
IUUC-Pca-100331	Procavia capensis	42.00	7.00e-56	209.00
IUUC-Ppe-101223	Prunus persica	81.42	8.00e-143	498.00
IUUC-Pva-103061	Pteropus vampyrus	40.32	7.00e-59	219.00
IUUC-Pgr-103302	Puccinia graminis	33.12	9.00e-38	150.00
IUUC-Ptt-103773	Puccinia triticina	33.12	1.00e-40	159.00
IUUC-Pte-104297	Pyrenophora teres	29.60	7.00e-14	70.90
IUUC-Rno-105606	Rattus norvegicus	40.32	1.00e-58	219.00
IUUC-Sha-106621	Sarcophilus harrisii	40.32	9.00e-59	219.00
IUUC-Ssl-108446	Sclerotinia sclerotiorum	27.79	2.00e-19	89.40
IUUC-Smo-108791	Selaginella moellendorffii	73.42	2.00e-128	451.00
IUUC-Sit-110800	Setaria italica	75.64	3.00e-131	460.00
IUUC-Sly-111003	Solanum lycopersicum	82.08	7.00e-146	509.00
IUUC-Stu-112083	Solanum tuberosum	81.76	2.00e-145	507.00
IUUC-Sar-113677	Sorex araneus	40.00	1.00e-03	36.20
IUUC-Sbi-113936	Sorghum bicolor	75.64	2.00e-130	457.00
IUUC-Sre-114955	Sporisorium reilianum	34.34	5.00e-47	181.00
IUUC-Tru-118518	Takifugu rubripes	40.84	4.00e-61	227.00
IUUC-Tsy-119285	Tarsius syrichta	40.00	2.00e-03	35.00
IUUC-Tni-120511	Tetraodon nigroviridis	40.84	4.00e-61	227.00
IUUC-Tca-121233	Theobroma cacao	86.60	4.00e-159	553.00
IUUC-Tae-123297	Triticum aestivum	76.19	2.00e-133	467.00
IUUC-Tur-126485	Triticum urartu	59.68	7.00e-93	332.00
IUUC-Tme-127071	Tuber melanosporum	30.45	3.00e-30	125.00
IUUC-Tbe-127457	Tupaia belangeri	38.39	2.00e-51	195.00
IUUC-Ttr-128708	Tursiops truncatus	39.61	7.00e-55	206.00
IUUC-Uma-129646	Ustilago maydis	33.98	5.00e-47	181.00
IUUC-Vpa-130606	Vicugna pacos	37.25	1.00e-24	105.00
IUUC-Vvi-131045	Vitis vinifera	86.96	8.00e-156	541.00
IUUC-Xtr-132674	Xenopus tropicalis	39.68	3.00e-64	237.00
IUUC-Xma-133413	Xiphophorus maculatus	40.51	3.00e-61	227.00
IUUC-Yli-134661	Yarrowia lipolytica	25.32	2.00e-19	89.00
IUUC-Zma-135166	Zea mays	75.00	6.00e-129	452.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence