iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028195

UUCD1 version

UUC-DaR-00747

Ensembl Protein ID

ENSDARP00000123656.1

UniProt Accession

F1QJQ0; F1QN06; F1QJQ0_DANRE

Genbank Protein ID

ENSDARP00000102093

Protein Name

LON peptidase N-terminal domain and ring finger 1,-like

Genbank Nucleotide ID

CR786572

Gene Name

lonrf1l

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000078567.4	ENSDART00000144516.2	ENSDARP00000123656.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.00e-11	43.0	452	510
E3 activity/RING/RING	3.90e-07	31.4	457	495

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlr 62
           p +f C++ + l+ +Pv++p+G+t+  +++e++l+++ + cP+++++l+e      +t+ 
   Q: 452  PNDFECSLCMRLFYQPVTTPCGHTFCTNCLERCLDHNPQ-CPLCKESLKEYLAFRKYTVT 510
           789***********************************9.********987666555555 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f+++Cl++          + +CPlC+
   Q: 457  CSLCMRLFYQ-PVTTPCGHTFCTNCLERC------LDHNPQCPLCK 495
           ****999977.***************999......9*********7 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSLRRLDQDY ALEERGRFFI PSETEGDWDV DEHVDHRQLV LLKAEALASE NRLKEAVDMF 60
AMALRYGPVR PEQLSSLVGC VLRNFKKKSE ESPARSEPNW TQDCELDCPG CHCFIAEPVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAACCGTA AGAATGCTTT GACATTTTTA TCATTTATTA TATTTTGCCA GTTCAGTGGG 60
CGTCGCTCGC AAACATGTCG TTGCGGAGAC TAGACCAAGA CTACGCTTTG GAGGAGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0005622--C:intracellular
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

dre:100317496

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	56.81	2.00e-172	598.00
IUUC-Atr-002972	Amborella trichopoda	40.27	3.00e-46	179.00
IUUC-Apl-003309	Anas platyrhynchos	65.54	9.00e-149	520.00
IUUC-Aca-004288	Anolis carolinensis	48.97	0.00e+00	631.00
IUUC-Aly-005476	Arabidopsis lyrata	33.71	7.00e-39	155.00
IUUC-Ath-006654	Arabidopsis thaliana	33.71	3.00e-39	156.00
IUUC-Acl-008224	Aspergillus clavatus	30.06	4.00e-39	156.00
IUUC-Afu-008802	Aspergillus fumigatus	29.11	5.00e-38	152.00
IUUC-Ani-009473	Aspergillus nidulans	32.89	9.00e-41	161.00
IUUC-Ate-010489	Aspergillus terreus	32.12	9.00e-39	155.00
IUUC-Ame-010716	Astyanax mexicanus	64.77	0.00e+00	949.00
IUUC-Bta-012903	Bos taurus	53.08	2.00e-171	595.00
IUUC-Bdi-014333	Brachypodium distachyon	41.92	2.00e-42	167.00
IUUC-Bol-016442	Brassica oleracea	31.88	6.00e-41	162.00
IUUC-Bra-016716	Brassica rapa	34.18	2.00e-36	147.00
IUUC-Cja-019312	Callithrix jacchus	48.89	5.00e-180	624.00
IUUC-Cfa-020159	Canis familiaris	54.41	9.00e-178	617.00
IUUC-Cpo-022528	Cavia porcellus	56.80	7.00e-165	573.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	29.73	5.00e-11	61.60
IUUC-Csa-023361	Chlorocebus sabaeus	50.08	2.00e-168	586.00
IUUC-Cho-024549	Choloepus hoffmanni	48.63	1.00e-133	470.00
IUUC-Cin-025668	Ciona intestinalis	45.32	7.00e-84	305.00
IUUC-Dno-029284	Dasypus novemcinctus	56.36	6.00e-174	603.00
IUUC-Dor-031123	Dipodomys ordii	54.04	2.00e-132	466.00
IUUC-Dse-031331	Dothistroma septosporum	31.83	3.00e-38	153.00
IUUC-Ete-032455	Echinops telfairi	67.02	7.00e-148	516.00
IUUC-Eca-033248	Equus caballus	67.02	1.00e-145	509.00
IUUC-Eeu-034441	Erinaceus europaeus	63.77	1.00e-151	529.00
IUUC-Fca-035551	Felis catus	55.82	5.00e-171	594.00
IUUC-Fal-036731	Ficedula albicollis	58.83	3.00e-178	618.00
IUUC-Gmo-039315	Gadus morhua	56.75	0.00e+00	800.00
IUUC-Gga-040888	Gallus gallus	65.79	2.00e-159	555.00
IUUC-Gac-042121	Gasterosteus aculeatus	60.10	0.00e+00	865.00
IUUC-Gma-042919	Glycine max	33.79	2.00e-39	157.00
IUUC-Ggo-044985	Gorilla gorilla	53.99	2.00e-170	592.00
IUUC-Hsa-046592	Homo sapiens	49.77	6.00e-173	601.00
IUUC-Hvu-047145	Hordeum vulgare	42.62	1.00e-26	114.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	54.50	5.00e-176	610.00
IUUC-Lch-050404	Latimeria chalumnae	52.05	0.00e+00	687.00
IUUC-Laf-053431	Loxodonta africana	57.07	5.00e-175	607.00
IUUC-Mcc-055751	Macaca mulatta	49.48	3.00e-165	575.00
IUUC-Mvi-060228	Microbotryum violaceum	32.18	4.00e-51	196.00
IUUC-Mmr-061283	Microcebus murinus	50.07	4.00e-174	605.00
IUUC-Mmu-063169	Mus musculus	52.43	4.00e-176	612.00
IUUC-Mac-065566	Musa acuminata	40.09	1.00e-44	174.00
IUUC-Mpu-066537	Mustela putorius furo	50.34	2.00e-174	606.00
IUUC-Mlu-067497	Myotis lucifugus	56.00	1.00e-172	600.00
IUUC-Nfi-068337	Neosartorya fischeri	30.06	6.00e-40	159.00
IUUC-Nle-068971	Nomascus leucogenys	55.37	2.00e-169	588.00
IUUC-Opr-070791	Ochotona princeps	58.87	9.00e-163	566.00
IUUC-Ont-071548	Oreochromis niloticus	62.34	0.00e+00	899.00
IUUC-Oan-072747	Ornithorhynchus anatinus	64.21	2.00e-148	518.00
IUUC-Ocu-074928	Oryctolagus cuniculus	65.23	5.00e-152	530.00
IUUC-Oba-075239	Oryza barthii	41.55	3.00e-44	172.00
IUUC-Obr-076158	Oryza brachyantha	41.58	4.00e-43	169.00
IUUC-Ogu-078154	Oryza glumaepatula	42.03	2.00e-44	174.00
IUUC-Oin-079067	Oryza indica	41.55	3.00e-44	173.00
IUUC-Olo-080663	Oryza longistaminata	41.55	5.00e-44	172.00
IUUC-Oni-082119	Oryza nivara	41.55	3.00e-44	172.00
IUUC-Opu-083266	Oryza punctata	42.48	7.00e-33	135.00
IUUC-Oru-085190	Oryza rufipogon	41.55	5.00e-44	172.00
IUUC-Ola-086977	Oryzias latipes	59.16	0.00e+00	831.00
IUUC-Oga-088719	Otolemur garnettii	49.58	6.00e-177	614.00
IUUC-Oar-089577	Ovis aries	55.27	1.00e-170	593.00
IUUC-Ptr-090711	Pan troglodytes	49.77	5.00e-173	601.00
IUUC-Pan-092587	Papio anubis	50.08	3.00e-169	589.00
IUUC-Psi-093128	Pelodiscus sinensis	54.44	3.00e-172	598.00
IUUC-Pfo-096474	Poecilia formosa	62.94	0.00e+00	876.00
IUUC-Pab-097800	Pongo abelii	49.47	8.00e-172	597.00
IUUC-Ppe-101621	Prunus persica	37.39	6.00e-37	148.00
IUUC-Pgr-103289	Puccinia graminis	27.06	8.00e-28	118.00
IUUC-Pte-104214	Pyrenophora teres	30.15	3.00e-37	150.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	30.15	3.00e-37	149.00
IUUC-Rno-105718	Rattus norvegicus	56.47	2.00e-169	589.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	30.51	4.00e-29	122.00
IUUC-Spo-108344	Schizosaccharomyces pombe	31.46	2.00e-23	103.00
IUUC-Sit-110495	Setaria italica	39.46	1.00e-43	171.00
IUUC-Sly-111396	Solanum lycopersicum	31.38	5.00e-39	155.00
IUUC-Sar-113220	Sorex araneus	67.30	2.00e-145	508.00
IUUC-Sbi-114779	Sorghum bicolor	40.12	8.00e-31	128.00
IUUC-Ssc-115733	Sus scrofa	50.14	3.00e-176	612.00
IUUC-Tgu-117431	Taeniopygia guttata	52.35	5.00e-176	611.00
IUUC-Tru-118274	Takifugu rubripes	58.31	0.00e+00	822.00
IUUC-Tsy-119043	Tarsius syrichta	54.83	9.00e-169	587.00
IUUC-Tni-120766	Tetraodon nigroviridis	56.29	0.00e+00	715.00
IUUC-Tca-121632	Theobroma cacao	34.92	1.00e-45	177.00
IUUC-Tur-126297	Triticum urartu	43.56	4.00e-35	143.00
IUUC-Tme-127112	Tuber melanosporum	35.74	2.00e-43	170.00
IUUC-Tbe-127284	Tupaia belangeri	65.48	2.00e-149	521.00
IUUC-Vpa-130408	Vicugna pacos	50.99	4.00e-145	508.00
IUUC-Vvi-130910	Vitis vinifera	33.33	3.00e-40	159.00
IUUC-Xtr-132417	Xenopus tropicalis	50.51	0.00e+00	636.00
IUUC-Xma-134099	Xiphophorus maculatus	63.22	0.00e+00	882.00
IUUC-Zma-135914	Zea mays	42.62	5.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence