iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000983

Ensembl Protein ID

EMT23788

UniProt Accession

M8BPS4; M8BPS4_AEGTA

Genbank Protein ID

EMT23788.1

Protein Name

Chromodomain-helicase-DNA-binding 3-like protein

Genbank Nucleotide ID

KD519202

Gene Name

F775_16903

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_16903	EMT23788	EMT23788

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.50e-09	36.4	812	854

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
            +C +C egge    ++ C++C + fH+aC++l+     p+ + w+Cp+Cr
   Q: 812  SICSICNEGGE----ILLCDNCPSSFHHACVGLE---ATPEGS-WYCPSCR 854
           58*********....9******************...889997.******7 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MPRGAAKRRR EPSPVAAAGE RKLLPGEHVE ERKRKIGSEA AISVSHAPNE FTLSIGHGQP 60
MVISFDPGLC GSWHQAVVIE ILDNFRSVRY TDFVDDNGSG SPLVEQVEVS DAIDGKSSAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCGGG GGGCCGCCAA GCGGAGGCGC GAGCCGTCCC CTGTCGCCGC CGCGGGGGAG 60
AGGAAGCTTC TTCCGGGCGA GCACGTCGAG GTCAGCGCCG TCGAAATCCG CACCGCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0238--DNA-binding
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR008395--Agenet-like_dom
IPR032308--Jas
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF05641--Agenet
PF16135--Jas
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_16903

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002730	Amborella trichopoda	46.65	1.00e-120	427.00
IUUC-Aly-006442	Arabidopsis lyrata	44.73	3.00e-106	379.00
IUUC-Ago-007848	Ashbya gossypii	37.84	5.00e-10	58.50
IUUC-Bci-013740	Botrytis cinerea	24.62	3.00e-08	53.50
IUUC-Cin-025596	Ciona intestinalis	28.46	8.00e-12	64.70
IUUC-Fso-038253	Fusarium solani	46.51	2.00e-08	53.50
IUUC-Gma-042754	Glycine max	34.46	4.00e-118	419.00
IUUC-Hvu-047053	Hordeum vulgare	84.94	0.00e+00	1694.00
IUUC-Lpe-051483	Leersia perrieri	43.56	3.00e-97	348.00
IUUC-Lma-053053	Leptosphaeria maculans	37.50	4.00e-07	50.10
IUUC-Meu-056050	Macropus eugenii	26.87	5.00e-12	67.40
IUUC-Mtr-058466	Medicago truncatula	34.55	4.00e-112	398.00
IUUC-Mac-065186	Musa acuminata	53.50	1.00e-131	463.00
IUUC-Oba-075185	Oryza barthii	46.02	3.00e-106	378.00
IUUC-Ogl-077108	Oryza glaberrima	46.02	5.00e-106	378.00
IUUC-Ogu-078963	Oryza glumaepatula	45.57	1.00e-105	376.00
IUUC-Oin-080086	Oryza indica	37.67	3.00e-71	262.00
IUUC-Olo-080566	Oryza longistaminata	46.34	3.00e-105	375.00
IUUC-Ome-081749	Oryza meridionalis	47.17	9.00e-111	393.00
IUUC-Oru-085037	Oryza rufipogon	46.00	1.00e-105	377.00
IUUC-Osa-085819	Oryza sativa	28.31	6.00e-44	172.00
IUUC-Pop-099041	Populus trichocarpa	36.04	5.00e-104	371.00
IUUC-Ppe-101593	Prunus persica	47.78	2.00e-119	423.00
IUUC-Pte-104185	Pyrenophora teres	38.60	1.00e-06	49.30
IUUC-Pyt-104775	Pyrenophora triticirepentis	35.38	3.00e-06	47.40
IUUC-Smo-109527	Selaginella moellendorffii	43.33	5.00e-98	350.00
IUUC-Sit-109995	Setaria italica	57.50	0.00e+00	1446.00
IUUC-Sly-111358	Solanum lycopersicum	45.42	3.00e-113	402.00
IUUC-Stu-112309	Solanum tuberosum	43.83	6.00e-114	404.00
IUUC-Sbi-114687	Sorghum bicolor	57.73	0.00e+00	1123.00
IUUC-Tca-121402	Theobroma cacao	36.36	2.00e-98	352.00
IUUC-Tae-125337	Triticum aestivum	94.49	0.00e+00	2643.00
IUUC-Tur-126057	Triticum urartu	59.02	1.00e-108	385.00
IUUC-Vvi-130916	Vitis vinifera	49.53	1.00e-113	404.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence