iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002827

Ensembl Protein ID

ERN12587

UniProt Accession

W1PRC9; W1PRC9_AMBTC

Genbank Protein ID

ERN12587.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392614

Gene Name

AMTR_s00025p00218280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00025p00218280	ERN12587	ERN12587

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	24.43	8.50e-01	30.00	IUUC-Sce-106201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MYLLKFLVNL IFIVSISFRN VLYSVSSLDK SADLTDYILK VKGLVANGFF DETLKLFQKL 60
HCSSVIGNDF ILPSILKACS ALQALQLGRQ IHCQVIKMGH EFDTITQNSL LTMYAKCSDV 120

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Nucleotide Sequence
(Fasta)

ATGTATTTAT TAAAGTTTTT GGTAAATTTA ATTTTTATTG TATCTATCAG TTTCAGGAAC 60
GTCCTCTACT CAGTCTCGTC CCTAGACAAA AGTGCAGACC TTACTGACTA TATTCTAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal

Interpro

IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom

PROSITE

PS51375--PPR

Pfam

PF01535--PPR
PF13041--PPR_2

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006321	Arabidopsis lyrata	33.46	3.00e-44	172.00
IUUC-Ath-006990	Arabidopsis thaliana	34.08	2.00e-63	236.00
IUUC-Bdi-014037	Brachypodium distachyon	31.00	4.00e-37	148.00
IUUC-Bol-016246	Brassica oleracea	31.53	4.00e-65	242.00
IUUC-Fox-038033	Fusarium oxysporum	33.90	2.10e+00	27.30
IUUC-Lpe-050946	Leersia perrieri	34.32	2.00e-71	262.00
IUUC-Mtr-058695	Medicago truncatula	31.53	8.00e-67	247.00
IUUC-Oba-075207	Oryza barthii	36.46	1.00e-31	130.00
IUUC-Ome-081873	Oryza meridionalis	42.19	6.00e-49	187.00
IUUC-Pop-100074	Populus trichocarpa	25.94	2.00e-11	62.00
IUUC-Ppe-101554	Prunus persica	30.04	1.00e-61	230.00
IUUC-Sce-106201	Saccharomyces cerevisiae	24.43	6.00e-03	35.00
IUUC-Smo-109647	Selaginella moellendorffii	28.68	6.00e-46	177.00
IUUC-Ssc-116311	Sus scrofa	30.77	1.40e+00	28.10
IUUC-Tca-121040	Theobroma cacao	29.23	3.00e-51	196.00
IUUC-Tur-126385	Triticum urartu	34.32	2.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence