iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-073804

Ensembl Protein ID

ENSOCUP00000022303.1

UniProt Accession

G1TYY5; G1TYY5_RABIT

Genbank Protein ID

ENSOCUP00000022303

Protein Name

LIM and SH3 domain protein 1

Genbank Nucleotide ID

AAGW02039658

Gene Name

LASP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000021796.2	ENSOCUT00000025292.1	ENSOCUP00000022303.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	1.30e-14	53.9	208	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 5    kvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
           + ++ ydy+a+++de +++ Gd++  +  ++ d gW++g+ e +g  G++P+n+ve +
   Q: 208  RYRAVYDYSAADEDEVSFQDGDTIVNV--QQIDDGWMYGTVERTGDTGMLPANYVEAI 263
           56899*******************999..99************************975 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MNPNCARCGK IVYPTEKVNC LDKFWHKACF HCETCKMTLN MKNYKGYEKK PYCNAHYPKQ 60
SFTMVADTPE NLRLKQQSEL QSQVRYKEEF EKNKGRGFSV VADTPELQRI KKTQDQISNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGGAGCCAT GAACCCCAAC TGCGCCCGGT GCGGCAAGAT CGTGTACCCT ACGGAGAAGG 60
TGAACTGTCT GGATAAGGTG AGCCCGGGTC CGCGAGCTGG GCTGCGGGGT CGGGGGCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000900--Nebulin_repeat
IPR001452--SH3_domain
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS51216--NEBULIN
PS50002--SH3

Pfam

PF00412--LIM
PF00880--Nebulin
PF14604--SH3_9

PRINTS

PR00452--SH3DOMAIN

SMART

SM00132--LIM
SM00227--NEBU
SM00326--SH3

Gene Ontology

GO:0005737--C:cytoplasm
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000663	Aegilops tauschii	29.63	4.00e-04	39.30
IUUC-Aml-001609	Ailuropoda melanoleuca	89.02	9.00e-108	382.00
IUUC-Atr-002465	Amborella trichopoda	26.67	4.30e-02	32.70
IUUC-Apl-003494	Anas platyrhynchos	72.69	4.00e-98	350.00
IUUC-Aca-004462	Anolis carolinensis	84.21	4.00e-119	420.00
IUUC-Ame-011113	Astyanax mexicanus	63.50	1.00e-77	282.00
IUUC-Bta-012469	Bos taurus	91.29	3.00e-125	440.00
IUUC-Cel-018413	Caenorhabditis elegans	52.80	2.00e-36	145.00
IUUC-Cja-019344	Callithrix jacchus	74.36	2.00e-58	218.00
IUUC-Cfa-020384	Canis familiaris	88.97	9.00e-113	399.00
IUUC-Cpo-022244	Cavia porcellus	83.20	6.00e-108	382.00
IUUC-Csa-023039	Chlorocebus sabaeus	88.26	1.00e-113	402.00
IUUC-Cin-025236	Ciona intestinalis	37.87	2.00e-37	149.00
IUUC-Csv-026002	Ciona savignyi	44.70	1.00e-49	189.00
IUUC-Dre-028335	Danio rerio	66.16	1.00e-86	311.00
IUUC-Dno-029377	Dasypus novemcinctus	90.31	2.00e-95	341.00
IUUC-Dor-031101	Dipodomys ordii	97.92	6.00e-46	177.00
IUUC-Dme-031598	Drosophila melanogaster	56.25	7.00e-41	162.00
IUUC-Eca-033966	Equus caballus	90.91	8.00e-110	389.00
IUUC-Fca-035699	Felis catus	88.59	1.00e-119	421.00
IUUC-Gmo-038981	Gadus morhua	44.87	2.00e-56	212.00
IUUC-Gga-040316	Gallus gallus	83.27	7.00e-120	422.00
IUUC-Gac-042632	Gasterosteus aculeatus	60.46	1.00e-78	285.00
IUUC-Gma-042981	Glycine max	28.33	1.00e-03	38.10
IUUC-Ggo-044835	Gorilla gorilla	86.74	4.00e-109	387.00
IUUC-Hsa-046825	Homo sapiens	92.80	7.00e-115	406.00
IUUC-Hvu-047787	Hordeum vulgare	27.94	5.00e-04	39.30
IUUC-Itr-048498	Ictidomys tridecemlineatus	90.91	1.00e-111	395.00
IUUC-Lpe-050758	Leersia perrieri	35.48	9.40e-02	32.00
IUUC-Loc-052082	Lepisosteus oculatus	65.54	1.00e-87	315.00
IUUC-Laf-053578	Loxodonta africana	91.67	2.00e-114	404.00
IUUC-Mcc-055650	Macaca mulatta	92.42	8.00e-115	405.00
IUUC-Meu-056479	Macropus eugenii	87.65	9.00e-111	392.00
IUUC-Mga-059763	Meleagris gallopavo	82.79	1.00e-107	381.00
IUUC-Mmr-061164	Microcebus murinus	90.49	5.00e-114	403.00
IUUC-Mdo-061979	Monodelphis domestica	88.81	4.00e-126	443.00
IUUC-Mmu-063302	Mus musculus	92.80	4.00e-130	456.00
IUUC-Mac-065516	Musa acuminata	30.56	2.00e-03	35.00
IUUC-Mpu-066114	Mustela putorius furo	87.88	2.00e-116	411.00
IUUC-Mlu-068217	Myotis lucifugus	92.80	7.00e-120	422.00
IUUC-Nle-069636	Nomascus leucogenys	75.85	4.00e-87	313.00
IUUC-Opr-070892	Ochotona princeps	90.15	1.00e-123	435.00
IUUC-Ont-072280	Oreochromis niloticus	65.15	2.00e-84	304.00
IUUC-Oan-073220	Ornithorhynchus anatinus	90.67	8.00e-32	128.00
IUUC-Oba-075638	Oryza barthii	27.78	2.00e-03	37.40
IUUC-Obr-076045	Oryza brachyantha	27.94	1.00e-03	38.10
IUUC-Ogl-077659	Oryza glaberrima	29.17	2.00e-03	37.40
IUUC-Ogu-078055	Oryza glumaepatula	28.12	4.80e-02	32.70
IUUC-Oin-079541	Oryza indica	27.94	2.00e-03	37.00
IUUC-Oni-082309	Oryza nivara	28.12	3.80e-02	33.10
IUUC-Opu-083412	Oryza punctata	27.54	1.00e-03	38.50
IUUC-Oru-085213	Oryza rufipogon	28.12	3.80e-02	33.10
IUUC-Osa-085312	Oryza sativa	29.17	2.00e-03	37.40
IUUC-Ola-086514	Oryzias latipes	62.64	4.00e-93	333.00
IUUC-Oga-088707	Otolemur garnettii	88.59	4.00e-118	416.00
IUUC-Oar-089771	Ovis aries	91.67	7.00e-127	446.00
IUUC-Ptr-091237	Pan troglodytes	92.80	7.00e-115	406.00
IUUC-Pan-092656	Papio anubis	92.42	8.00e-115	405.00
IUUC-Pma-094377	Petromyzon marinus	55.04	6.00e-65	240.00
IUUC-Pfo-097079	Poecilia formosa	55.85	1.00e-82	298.00
IUUC-Pab-097833	Pongo abelii	86.74	3.00e-109	387.00
IUUC-Pop-099698	Populus trichocarpa	31.25	2.00e-04	40.40
IUUC-Pca-100691	Procavia capensis	94.70	2.00e-115	408.00
IUUC-Pva-102270	Pteropus vampyrus	85.55	7.00e-113	399.00
IUUC-Rno-105362	Rattus norvegicus	93.56	2.00e-130	458.00
IUUC-Sce-106228	Saccharomyces cerevisiae	40.00	8.00e-07	48.90
IUUC-Sha-107134	Sarcophilus harrisii	85.38	4.00e-111	394.00
IUUC-Smo-108841	Selaginella moellendorffii	28.33	5.00e-03	35.40
IUUC-Sit-110147	Setaria italica	26.67	7.30e-02	32.00
IUUC-Sly-111106	Solanum lycopersicum	28.33	6.00e-03	35.80
IUUC-Stu-112570	Solanum tuberosum	28.33	6.00e-03	35.80
IUUC-Sre-115023	Sporisorium reilianum	55.77	4.00e-11	63.20
IUUC-Tru-118693	Takifugu rubripes	54.72	4.00e-74	270.00
IUUC-Tni-120393	Tetraodon nigroviridis	59.47	8.00e-76	276.00
IUUC-Tca-121863	Theobroma cacao	26.67	1.40e-02	34.70
IUUC-Tae-125394	Triticum aestivum	27.94	4.00e-04	39.70
IUUC-Tur-126326	Triticum urartu	28.99	5.00e-04	39.30
IUUC-Ttr-128639	Tursiops truncatus	89.77	2.00e-120	424.00
IUUC-Uma-129649	Ustilago maydis	53.85	6.00e-11	62.80
IUUC-Vpa-130114	Vicugna pacos	90.06	4.00e-61	226.00
IUUC-Vvi-131569	Vitis vinifera	24.56	3.60e-02	33.10
IUUC-Xtr-131827	Xenopus tropicalis	76.05	4.00e-112	397.00
IUUC-Xma-134054	Xiphophorus maculatus	62.12	4.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence