iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017890

Ensembl Protein ID

Bra031850.1-P

UniProt Accession

M4ESS0; M4ESS0_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra031850	Bra031850.1	Bra031850.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.10e-16	59.4	171	271

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavslla 71
           ++vkvs++g+++++++dl++++++ +L  a+++ +t                          l+++++ l+YeD+dGD++ l++D++++++++   
   Q: 171  LFVKVSMDGAPYLRKVDLRSYTNYMELSLALEKmFTtftlgqcgangaagkdklcetklkdLLNGKDYVLTYEDKDGDWM-LVGDVPWEMFID--- 262
           58*******************************844688*********************99999***************.************... PP
   S: 72   skksllrlliqk 83
               +++l i+k
   Q: 263  ---VCKKLKIMK 271
           ...688888876 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MVSILGNLLK KCYWRKSCRV HHQLASREHN YLGLSDCSSS SVGSSTLSGL DDKAAISLKA 60
TELTLGLPAR ETDEKPFFPL VPSKDEVSLK KRGFSDAMDK SKSSVYTEKN WMFPEGVAAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCTA TTTTAGGAAA CCTTTTAAAG AAATGTTACT GGAGAAAGAG CTGCAGAGTT 60
CATCACCAGC TAGCGTCTCG GGAGCATAAC TACCTGGGCC TCTCTGACTG TTCCTCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005481	Arabidopsis lyrata	73.46	3.00e-116	410.00
IUUC-Ath-007607	Arabidopsis thaliana	73.46	1.00e-116	412.00
IUUC-Bol-015861	Brassica oleracea	86.71	4.00e-126	443.00
IUUC-Cel-018552	Caenorhabditis elegans	56.25	3.80e-01	27.30
IUUC-Gma-043506	Glycine max	58.33	1.00e-84	305.00
IUUC-Mtr-058323	Medicago truncatula	54.78	2.00e-80	291.00
IUUC-Mac-064563	Musa acuminata	52.60	6.00e-69	253.00
IUUC-Ome-081266	Oryza meridionalis	56.21	1.00e-48	186.00
IUUC-Ola-086575	Oryzias latipes	29.58	4.20e-01	30.40
IUUC-Pop-099102	Populus trichocarpa	50.15	8.00e-77	280.00
IUUC-Ppe-101672	Prunus persica	52.11	1.00e-84	306.00
IUUC-Smo-109586	Selaginella moellendorffii	48.95	2.00e-41	162.00
IUUC-Stu-112219	Solanum tuberosum	52.17	5.00e-70	257.00
IUUC-Tca-121767	Theobroma cacao	51.98	9.00e-82	296.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence