iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131708

Ensembl Protein ID

VIT_18s0001g08090.t01

UniProt Accession

F6GZL3; F6GZL3_VITVI

Genbank Protein ID

CCB45692.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

FN595227

Gene Name

VIT_18s0001g08090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g08090	VIT_18s0001g08090.t01	VIT_18s0001g08090.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.30e-16	59.8	262	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedl 63
           ++vkvs++g+++++++dl+ +  +++L +a+++ +                           l +se+ l+YeD+dGD++ l++D+++
   Q: 262  LFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKmFScftigqygshgapgremlsesklkdLLHGSEYVLTYEDKDGDWM-LVGDVPW 348
           58*******************************72256799*******************99999***************.******* PP
   S: 64   dkavsllaskksllrlliqk 83
           +++++       ++rl+i+k
   Q: 349  QMFIE------TCKRLRIMK 362
           *****......9******97 PP

Organism

Vitis vinifera

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MENLGLLGAQ TGYKGIGVLF NVMSPPLLGV GEEEGQSNVT ILASSASMES VCQISSGLKE 60
RNYMGLSECS SVDSSAISTD SDGNKSSLNL KATELRLGLP GSLSPGREPE LCLLSSTKLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAATT TAGGACTTCT GGGTGCCCAA ACCGGTGAGT TACAGAGTAC TTTAAATCCA 60
CATTGCTGTG AGAAGGTTTG GAGTTATAAA TTTTTTTGCT CTTAGTGTGG TTGTCTGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002534	Amborella trichopoda	60.10	3.00e-107	380.00
IUUC-Aly-005481	Arabidopsis lyrata	61.59	6.00e-102	362.00
IUUC-Ath-007607	Arabidopsis thaliana	61.59	9.00e-102	362.00
IUUC-Bol-015732	Brassica oleracea	56.43	8.00e-96	342.00
IUUC-Bra-017890	Brassica rapa	49.85	3.00e-70	257.00
IUUC-Dme-031916	Drosophila melanogaster	35.14	3.70e-01	28.50
IUUC-Gma-043352	Glycine max	70.95	8.00e-128	449.00
IUUC-Mtr-058323	Medicago truncatula	69.12	5.00e-119	419.00
IUUC-Mla-059044	Melampsora laricipopulina	50.00	9.30e-01	28.90
IUUC-Mac-064563	Musa acuminata	50.96	3.00e-75	273.00
IUUC-Ome-081266	Oryza meridionalis	56.94	3.00e-46	177.00
IUUC-Opu-083799	Oryza punctata	63.12	1.00e-44	172.00
IUUC-Pop-099102	Populus trichocarpa	78.65	2.00e-142	497.00
IUUC-Ppe-101376	Prunus persica	72.49	2.00e-140	491.00
IUUC-Smo-109586	Selaginella moellendorffii	33.80	3.00e-40	158.00
IUUC-Sly-111221	Solanum lycopersicum	47.81	7.00e-65	239.00
IUUC-Stu-112219	Solanum tuberosum	73.35	2.00e-134	470.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence