iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121623

Ensembl Protein ID

EOY21922

UniProt Accession

A0A061FYG2; A0A061FYG2_THECC

Genbank Protein ID

EOY21922.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_014097

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_014097	EOY21922	EOY21922
TCM_014097	EOY21923	EOY21923

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	32.3	163	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+d+   ++  ++lp C+H+fh+ C+ kw        ++ +CP+Cr
   Q: 163  CTICLQDIkvgET-ARSLPkCQHTFHLACVDKW------LIRRGSCPVCR 205
           ********87444.999999*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MFLDAVDTVP RFIAGAISGA LTGLFAFAGA FTGAVMGALA GKASDSGILR GAGLGAIAGA 60
ILSVEVLEAS RAYWCLEQSG SRGSSSMADF IEELLRGRLV EEGLTPAMLN AYNWQLSLAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCCCTCCAA AGAGTCACCC AAATATCTAG GCGCTTTTCT TTTTCTCACC CATCAAAGCA 60
AATCCACCCA AACCTTCTCT CTCTCTCTCT CTCTCTTGCT GTGCAACAAT CTTTTGTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0010200--P:response to chitin

KEGG

tcc:TCM_014097

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000628	Aegilops tauschii	60.00	1.00e-43	168.00
IUUC-Aly-006321	Arabidopsis lyrata	68.14	5.00e-62	231.00
IUUC-Ath-007375	Arabidopsis thaliana	67.65	1.00e-61	228.00
IUUC-Bdi-014618	Brachypodium distachyon	58.45	3.00e-52	197.00
IUUC-Gma-043588	Glycine max	66.67	1.00e-57	214.00
IUUC-Hvu-047415	Hordeum vulgare	51.61	7.00e-35	138.00
IUUC-Lpe-051393	Leersia perrieri	60.40	5.00e-47	179.00
IUUC-Mtr-058669	Medicago truncatula	65.20	1.00e-57	214.00
IUUC-Oba-075137	Oryza barthii	55.84	1.00e-42	165.00
IUUC-Obr-076442	Oryza brachyantha	60.50	2.00e-45	175.00
IUUC-Ogl-077830	Oryza glaberrima	61.50	9.00e-48	182.00
IUUC-Ogu-078610	Oryza glumaepatula	61.22	1.00e-45	175.00
IUUC-Oin-079594	Oryza indica	61.50	9.00e-48	182.00
IUUC-Olo-080783	Oryza longistaminata	49.28	8.00e-42	162.00
IUUC-Ome-081475	Oryza meridionalis	56.85	4.00e-44	170.00
IUUC-Oni-082244	Oryza nivara	61.22	1.00e-45	174.00
IUUC-Opu-083541	Oryza punctata	48.67	2.00e-38	151.00
IUUC-Oru-085125	Oryza rufipogon	61.22	1.00e-45	174.00
IUUC-Osa-086024	Oryza sativa	61.50	9.00e-48	182.00
IUUC-Smo-109575	Selaginella moellendorffii	54.55	1.00e-48	185.00
IUUC-Sit-109877	Setaria italica	58.91	1.00e-42	165.00
IUUC-Sbi-114059	Sorghum bicolor	55.67	2.00e-49	187.00
IUUC-Tae-124714	Triticum aestivum	58.74	7.00e-47	179.00
IUUC-Tur-126124	Triticum urartu	59.52	8.00e-43	166.00
IUUC-Vvi-131189	Vitis vinifera	75.50	1.00e-67	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence