iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099567

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_851870; POPTR_0002s16670g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s16670	POPTR_0002s16670.1	POPTR_0002s16670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.80e-06	27.8	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++kd +  l+    C H fh  Cl +w       + + +CP+Cr
   Q: 101  CSICLCEYKD-LEMLRmmpeCRHYFHSLCLDAW------LKLNGSCPVCR 143
           ********88.66666666**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSPATVTTST SPPSSNYLTN LGLGYSIAIA LGFLVLVSTI LLASYICCRA TRNRSHDEEQ 60
ERDLEGAAVG LDQAVINSYP KFQFSRDGGF CERTDNLNST CSICLCEYKD LEMLRMMPEC 120

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Nucleotide Sequence
(Fasta)

CCCAAAGCCC ATGATATGAT TCTCCTACTT ACAAGCAAAT TAAATGCCCC TCTCTGTTTC 60
CAAACCCTGT ATTAAATGCA GCAGCTGGAA AATCCACCCA CCTTCCCCCC AAAAAAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s16670g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042700	Glycine max	50.55	6.00e-22	96.30
IUUC-Ppa-095719	Physcomitrella patens	46.15	7.00e-31	125.00
IUUC-Smo-109669	Selaginella moellendorffii	46.36	2.00e-36	144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence