iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1560__AT3G14400.1	fgenesh2_kg.3__1560__AT3G14400.1	fgenesh2_kg.3__1560__AT3G14400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.00e-77	260.3	25	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenp..kepkgellkslqklfeelwkskkkavsprellk 75
           Gl+NlgNtCY+NSvLQcL+++p+l++++l+ k++++++   +   +++ +++   +++ ++l + + +  +p+++ +
   Q: 25   GLRNLGNTCYLNSVLQCLTFTPPLANFCLThKHSSHCDSYVDgeRKRDCPFCIVEKRIARSL-SVDLTTDAPNKISS 100
           9****************************976666666655432556668888889999999.8888999******* PP
   S: 76   alkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlks 152
           +lk +ae+f+  +q+Da+Efl++++d+ +++     + +k +             + +++  ++++++++F+g l+s
   Q: 101  CLKIFAEHFKLGRQEDAHEFLRYVIDACHNTS---LRLKKLRI------------KGNEPFNGNTVVKEIFGGALQS 162
           ******************************99...22333333............3455778899************ PP
   S: 153  qikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPev 229
           q+kcl+c+ +s++ ++ +d+sl++  ++     s+++++++f++ e l+g+nky+ce+c+k+++a+k++++ + P++
   Q: 163  QVKCLSCGAESNKADEIMDISLEILHSS-----SVKESMQKFFQSEILDGNNKYKCETCEKLVTARKQMSILQAPNI 234
           **************************99.....9******************************************* PP
   S: 230  LilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgk 305
           L+++LkRf     + +  ki+k ++f + L ls+f+++ +++   + +Y+L++++vHsG s++sGHY+ayvk++ g+
   Q: 235  LVIQLKRF----GGIFGGKIDKAISFGEILVLSNFMSKASKDP--QPEYKLFGIIVHSGfSPESGHYYAYVKDSLGR 305
           ********....568899********************77666..9******************************* PP
   S: 306  WllfdDskVtevkeeevleetgstaYvlfYkr 337
           W++++Ds V+ ++ +evl+   ++aY+lf+ r
   Q: 306  WYCCNDSFVSLSTLQEVLS---EKAYILFFSR 334
           *******************...*******987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGFKLQMSWM PSLLSQKRRN GPPLGLRNLG NTCYLNSVLQ CLTFTPPLAN FCLTHKHSSH 60
CDSYVDGERK RDCPFCIVEK RIARSLSVDL TTDAPNKISS CLKIFAEHFK LGRQEDAHEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGCGAAGG GATTGTGGGG TTTGTTGCTG GGCGGGTCTC TTCCCTCGGC AGTTACCTTC 60
ATCGAATTCG ATCTTCTTCT TCCTTCTTTC CTCAACTCCT CAAAAATCGT TAAAAATCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_478859

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001017	Aegilops tauschii	55.81	6.00e-94	337.00
IUUC-Atr-002832	Amborella trichopoda	52.94	2.00e-131	461.00
IUUC-Ath-006707	Arabidopsis thaliana	94.86	0.00e+00	1289.00
IUUC-Bdi-014044	Brachypodium distachyon	42.01	7.00e-113	400.00
IUUC-Bol-016356	Brassica oleracea	75.66	0.00e+00	982.00
IUUC-Bra-018096	Brassica rapa	75.73	0.00e+00	971.00
IUUC-Gma-043410	Glycine max	51.98	4.00e-178	617.00
IUUC-Hvu-047673	Hordeum vulgare	60.58	3.00e-72	265.00
IUUC-Lpe-050888	Leersia perrieri	55.36	2.00e-106	379.00
IUUC-Mtr-058396	Medicago truncatula	52.27	2.00e-178	618.00
IUUC-Mac-065596	Musa acuminata	61.48	2.00e-116	412.00
IUUC-Oba-075223	Oryza barthii	58.05	5.00e-109	387.00
IUUC-Obr-076589	Oryza brachyantha	39.38	2.00e-101	362.00
IUUC-Ogl-077769	Oryza glaberrima	58.05	5.00e-109	387.00
IUUC-Ogu-078416	Oryza glumaepatula	56.27	6.00e-94	337.00
IUUC-Oin-079451	Oryza indica	58.36	4.00e-110	391.00
IUUC-Olo-080569	Oryza longistaminata	58.36	3.00e-110	391.00
IUUC-Ome-081320	Oryza meridionalis	39.68	4.00e-96	344.00
IUUC-Oni-082823	Oryza nivara	56.27	6.00e-94	337.00
IUUC-Opu-083432	Oryza punctata	51.89	1.00e-89	323.00
IUUC-Oru-084652	Oryza rufipogon	50.34	2.00e-80	292.00
IUUC-Osa-085846	Oryza sativa	57.83	2.00e-110	392.00
IUUC-Ppa-095241	Physcomitrella patens	55.46	6.00e-114	404.00
IUUC-Pop-098875	Populus trichocarpa	54.77	0.00e+00	655.00
IUUC-Ppe-101980	Prunus persica	50.15	7.00e-171	593.00
IUUC-Spo-108119	Schizosaccharomyces pombe	40.83	2.00e-64	239.00
IUUC-Smo-108780	Selaginella moellendorffii	57.42	2.00e-106	378.00
IUUC-Sit-109696	Setaria italica	60.00	4.00e-110	391.00
IUUC-Sly-111085	Solanum lycopersicum	48.79	2.00e-159	555.00
IUUC-Stu-111972	Solanum tuberosum	48.26	2.00e-150	525.00
IUUC-Sbi-114319	Sorghum bicolor	40.17	5.00e-113	401.00
IUUC-Tca-121693	Theobroma cacao	60.25	1.00e-161	562.00
IUUC-Tae-125372	Triticum aestivum	56.81	4.00e-110	391.00
IUUC-Tur-126469	Triticum urartu	47.16	3.00e-94	338.00
IUUC-Ttr-128764	Tursiops truncatus	35.71	5.00e-58	219.00
IUUC-Vvi-131135	Vitis vinifera	52.62	0.00e+00	636.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence