iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130928

Ensembl Protein ID

VIT_06s0004g03170.t01

UniProt Accession

F6GTZ1; F6GTZ1_VITVI

Genbank Protein ID

CCB43655.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594951

Gene Name

ATGTF2H2; VIT_06s0004g03170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0004g03170	VIT_06s0004g03170.t01	VIT_06s0004g03170.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	41.67	2.00e-80	294.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNDMEHRKTN DGEGRRLDGE EEEEEEDEDE GNGRGLDAWE RAYADERSWE SLQEDESGLL 60
RPIDNKTIYH AQYRRRIRSL YSSTTTARIQ KGLIRYLYIV VDLSRAASEM DFKPSRMAVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGTGAAGCC TCGGCCTAAA CCCTACGCAT TCATCCATTC CATTCTAGGG TTTTCACTTT 60
TCATCTACAC CAGGTATAAT CTTCTCTCTT CTCTATATTT CCCTTCGCTT TTTAACTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

vvi:100253554

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	74.62	4.00e-121	427.00
IUUC-Aml-002041	Ailuropoda melanoleuca	44.16	2.00e-83	301.00
IUUC-Atr-003056	Amborella trichopoda	75.71	1.00e-145	508.00
IUUC-Apl-003464	Anas platyrhynchos	43.84	1.00e-75	275.00
IUUC-Aca-004745	Anolis carolinensis	44.19	1.00e-82	299.00
IUUC-Aly-005559	Arabidopsis lyrata	78.68	3.00e-176	610.00
IUUC-Ath-007556	Arabidopsis thaliana	78.68	1.00e-176	611.00
IUUC-Ago-007851	Ashbya gossypii	41.16	5.00e-82	297.00
IUUC-Acl-008100	Aspergillus clavatus	39.47	2.00e-82	298.00
IUUC-Afl-008649	Aspergillus flavus	39.71	3.00e-12	61.60
IUUC-Afu-009066	Aspergillus fumigatus	38.98	1.00e-83	302.00
IUUC-Ani-009372	Aspergillus nidulans	38.38	2.00e-79	288.00
IUUC-Ang-009726	Aspergillus niger	38.14	5.00e-85	307.00
IUUC-Aor-010135	Aspergillus oryzae	38.74	5.00e-81	294.00
IUUC-Ate-010399	Aspergillus terreus	33.14	5.00e-22	96.70
IUUC-Ame-011618	Astyanax mexicanus	44.81	2.00e-93	335.00
IUUC-Bgr-012154	Blumeria graminis	37.89	4.00e-73	267.00
IUUC-Bta-012353	Bos taurus	44.16	4.00e-87	313.00
IUUC-Bci-013932	Botrytis cinerea	38.27	1.00e-80	292.00
IUUC-Bdi-014391	Brachypodium distachyon	74.76	4.00e-167	580.00
IUUC-Bol-015128	Brassica oleracea	78.00	7.00e-179	619.00
IUUC-Bra-017932	Brassica rapa	78.00	4.00e-179	619.00
IUUC-Cel-018649	Caenorhabditis elegans	39.02	1.00e-67	249.00
IUUC-Cja-018776	Callithrix jacchus	45.18	4.00e-85	307.00
IUUC-Cfa-020584	Canis familiaris	44.92	6.00e-85	306.00
IUUC-Cpo-021300	Cavia porcellus	44.16	7.00e-84	303.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	50.64	8.00e-97	346.00
IUUC-Csa-024092	Chlorocebus sabaeus	44.67	3.00e-84	304.00
IUUC-Cho-024919	Choloepus hoffmanni	43.06	1.00e-39	155.00
IUUC-Cin-025386	Ciona intestinalis	41.73	4.00e-87	313.00
IUUC-Csv-026295	Ciona savignyi	42.68	2.00e-85	308.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	37.94	5.00e-73	267.00
IUUC-Cne-026956	Cryptococcus neoformans	38.12	2.00e-79	289.00
IUUC-Cme-027150	Cyanidioschyzon merolae	33.11	7.00e-54	204.00
IUUC-Dre-027962	Danio rerio	44.16	9.00e-94	335.00
IUUC-Dno-029979	Dasypus novemcinctus	45.95	9.00e-74	269.00
IUUC-Dse-031405	Dothistroma septosporum	39.29	2.00e-78	285.00
IUUC-Dme-031710	Drosophila melanogaster	40.80	1.00e-85	309.00
IUUC-Ete-032631	Echinops telfairi	42.39	4.00e-78	284.00
IUUC-Eca-034054	Equus caballus	45.18	2.00e-85	308.00
IUUC-Fca-035724	Felis catus	42.13	1.00e-79	288.00
IUUC-Fal-036987	Ficedula albicollis	45.18	4.00e-93	333.00
IUUC-Fox-037692	Fusarium oxysporum	39.91	6.00e-86	310.00
IUUC-Fso-038442	Fusarium solani	42.96	3.00e-86	311.00
IUUC-Gmo-039273	Gadus morhua	44.16	2.00e-93	334.00
IUUC-Ggr-040009	Gaeumannomyces graminis	41.95	3.00e-65	241.00
IUUC-Gga-041089	Gallus gallus	43.65	2.00e-91	328.00
IUUC-Gac-041978	Gasterosteus aculeatus	43.15	9.00e-86	309.00
IUUC-Gma-043371	Glycine max	78.00	0.00e+00	648.00
IUUC-Hsa-046001	Homo sapiens	44.67	1.00e-83	302.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	44.92	4.00e-91	327.00
IUUC-Kpa-049235	Komagataella pastoris	37.25	1.00e-77	282.00
IUUC-Lch-049926	Latimeria chalumnae	44.42	2.00e-88	318.00
IUUC-Lpe-051352	Leersia perrieri	77.92	1.00e-163	568.00
IUUC-Loc-051987	Lepisosteus oculatus	43.15	4.00e-91	327.00
IUUC-Lma-053171	Leptosphaeria maculans	32.75	3.00e-66	245.00
IUUC-Laf-054372	Loxodonta africana	44.16	6.00e-88	316.00
IUUC-Mcc-055108	Macaca mulatta	44.67	5.00e-84	303.00
IUUC-Mor-056990	Magnaporthe oryzae	37.58	2.00e-78	285.00
IUUC-Mtr-058401	Medicago truncatula	79.40	0.00e+00	654.00
IUUC-Mla-059186	Melampsora laricipopulina	40.10	9.00e-86	309.00
IUUC-Mvi-060262	Microbotryum violaceum	40.29	3.00e-87	314.00
IUUC-Mmr-061688	Microcebus murinus	40.93	8.00e-72	263.00
IUUC-Mdo-062154	Monodelphis domestica	45.69	2.00e-89	321.00
IUUC-Mmu-064232	Mus musculus	43.80	3.00e-83	301.00
IUUC-Mac-065091	Musa acuminata	77.39	2.00e-172	597.00
IUUC-Mpu-066747	Mustela putorius furo	40.61	4.00e-69	254.00
IUUC-Mlu-067799	Myotis lucifugus	41.84	3.00e-72	264.00
IUUC-Nfi-068371	Neosartorya fischeri	37.50	5.00e-14	69.30
IUUC-Ncr-068704	Neurospora crassa	38.88	4.00e-80	290.00
IUUC-Nle-069054	Nomascus leucogenys	44.67	7.00e-84	303.00
IUUC-Ont-071624	Oreochromis niloticus	45.18	2.00e-92	331.00
IUUC-Oan-072898	Ornithorhynchus anatinus	44.42	1.00e-88	319.00
IUUC-Ocu-074289	Oryctolagus cuniculus	43.04	4.00e-66	243.00
IUUC-Oba-075985	Oryza barthii	76.40	8.00e-161	558.00
IUUC-Obr-076887	Oryza brachyantha	75.06	3.00e-165	573.00
IUUC-Ogl-077823	Oryza glaberrima	76.40	8.00e-161	558.00
IUUC-Ogu-078412	Oryza glumaepatula	79.88	1.00e-144	505.00
IUUC-Oin-079569	Oryza indica	76.69	8.00e-121	426.00
IUUC-Olo-080249	Oryza longistaminata	77.55	9.00e-121	426.00
IUUC-Ome-081240	Oryza meridionalis	79.57	2.00e-143	501.00
IUUC-Oni-082152	Oryza nivara	79.88	1.00e-143	501.00
IUUC-Opu-084011	Oryza punctata	77.18	6.00e-161	559.00
IUUC-Oru-084719	Oryza rufipogon	75.49	3.00e-148	517.00
IUUC-Osa-085286	Oryza sativa	76.14	5.00e-161	560.00
IUUC-Ola-086525	Oryzias latipes	42.23	5.00e-78	283.00
IUUC-Olu-087876	Ostreococcus lucimarinus	46.15	1.00e-87	315.00
IUUC-Oga-088125	Otolemur garnettii	43.40	2.00e-85	308.00
IUUC-Oar-089701	Ovis aries	44.16	8.00e-87	313.00
IUUC-Ptr-091218	Pan troglodytes	44.92	3.00e-84	304.00
IUUC-Pan-091755	Papio anubis	44.67	5.00e-84	303.00
IUUC-Psi-094061	Pelodiscus sinensis	45.43	1.00e-89	322.00
IUUC-Pma-094430	Petromyzon marinus	45.63	3.00e-62	230.00
IUUC-Pno-094900	Phaeosphaeria nodorum	30.41	3.00e-39	155.00
IUUC-Ppa-095895	Physcomitrella patens	63.38	3.00e-154	536.00
IUUC-Pfo-096297	Poecilia formosa	45.63	1.00e-61	228.00
IUUC-Pab-097717	Pongo abelii	44.67	5.00e-84	303.00
IUUC-Pop-098938	Populus trichocarpa	83.64	0.00e+00	641.00
IUUC-Pca-100389	Procavia capensis	41.04	2.00e-68	251.00
IUUC-Ppe-102045	Prunus persica	83.49	0.00e+00	655.00
IUUC-Pva-102357	Pteropus vampyrus	50.24	2.00e-41	160.00
IUUC-Pgr-103399	Puccinia graminis	40.90	3.00e-86	311.00
IUUC-Ptt-103872	Puccinia triticina	41.13	9.00e-87	313.00
IUUC-Pte-104092	Pyrenophora teres	38.94	4.00e-63	234.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	39.56	7.00e-64	237.00
IUUC-Rno-105515	Rattus norvegicus	43.80	1.00e-86	312.00
IUUC-Sce-106434	Saccharomyces cerevisiae	41.92	8.00e-84	303.00
IUUC-Sha-106808	Sarcophilus harrisii	44.67	1.00e-87	315.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	41.77	5.00e-80	290.00
IUUC-Spo-108044	Schizosaccharomyces pombe	42.39	5.00e-89	320.00
IUUC-Smo-109581	Selaginella moellendorffii	57.76	1.00e-138	485.00
IUUC-Sit-110704	Setaria italica	77.49	5.00e-166	576.00
IUUC-Sly-110990	Solanum lycopersicum	80.76	4.00e-147	513.00
IUUC-Stu-112542	Solanum tuberosum	78.83	7.00e-98	348.00
IUUC-Sar-113766	Sorex araneus	44.14	2.00e-71	261.00
IUUC-Sbi-114016	Sorghum bicolor	78.06	5.00e-166	576.00
IUUC-Sre-115099	Sporisorium reilianum	35.92	3.00e-79	288.00
IUUC-Ssc-115277	Sus scrofa	44.67	5.00e-82	296.00
IUUC-Tgu-117343	Taeniopygia guttata	44.42	5.00e-92	330.00
IUUC-Tru-118397	Takifugu rubripes	44.16	7.00e-88	316.00
IUUC-Tni-120272	Tetraodon nigroviridis	44.44	2.00e-87	315.00
IUUC-Tca-121514	Theobroma cacao	85.93	0.00e+00	689.00
IUUC-Tre-121990	Trichoderma reesei	40.67	5.00e-80	290.00
IUUC-Tvi-122504	Trichoderma virens	42.35	1.00e-77	282.00
IUUC-Tae-123153	Triticum aestivum	75.30	3.00e-164	570.00
IUUC-Tur-126693	Triticum urartu	78.28	1.00e-124	438.00
IUUC-Tme-127011	Tuber melanosporum	41.55	3.00e-83	301.00
IUUC-Tbe-127939	Tupaia belangeri	44.67	9.00e-84	302.00
IUUC-Ttr-128889	Tursiops truncatus	38.58	2.00e-70	258.00
IUUC-Uma-129450	Ustilago maydis	36.28	6.00e-80	290.00
IUUC-Vda-129919	Verticillium dahliae	39.41	8.00e-72	263.00
IUUC-Xtr-131891	Xenopus tropicalis	39.85	1.00e-77	282.00
IUUC-Xma-133260	Xiphophorus maculatus	44.84	6.00e-61	226.00
IUUC-Yli-134578	Yarrowia lipolytica	41.13	3.00e-78	284.00
IUUC-Zma-135427	Zea mays	79.03	8.00e-168	582.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence