iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074143

Ensembl Protein ID

ENSOCUP00000000644.2

UniProt Accession

G1SDZ2; G1SDZ2_RABIT

Genbank Protein ID

ENSOCUP00000000644

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02068959

Gene Name

ERCC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000000741.3	ENSOCUT00000000743.3	ENSOCUP00000000644.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	75.98	0.00e+00	2054.00	IUUC-Hsa-046895
UBD/Alpha-Helix/UBA	75.98	0.00e+00	2054.00	IUUC-Hsa-046895

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MSNEGVPHSH ETQGLDCLPS ECIQSDAEMA IQEEDTEGME VEGEALLPPR VPGDGPSTSA 60
GDGMSTAARR GPALLHIDRH QIQAVEPSAQ ALELQGLGVD VYDQAVLEQG VLQQVDSAIH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGTCCATA GAGGATGTCA AATGAAGGAG TCCCCCACTC ACATGAAACT CAGGGTTTGG 60
ACTGTTTACC AAGTGAGTGC ATCCAGAGCG ATGCAGAAAT GGCCATCCAA GAGGAAGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005829--C:cytosol
GO:0005794--C:Golgi apparatus
GO:0005730--C:nucleolus
GO:0008023--C:transcription elongation factor complex
GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0003677--F:DNA binding
GO:0008094--F:DNA-dependent ATPase activity
GO:0030296--F:protein tyrosine kinase activator activity
GO:0007256--P:activation of JNKK activity
GO:0007257--P:activation of JUN kinase activity
GO:0006284--P:base-excision repair
GO:0008630--P:intrinsic apoptotic signaling pathway in response to DNA damage
GO:0035264--P:multicellular organism growth
GO:0045494--P:photoreceptor cell maintenance
GO:0032786--P:positive regulation of DNA-templated transcription, elongation
GO:0006290--P:pyrimidine dimer repair
GO:0010332--P:response to gamma radiation
GO:0000303--P:response to superoxide
GO:0009636--P:response to toxic substance
GO:0010224--P:response to UV-B
GO:0010165--P:response to X-ray
GO:0006362--P:transcription elongation from RNA polymerase I promoter
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000518	Aegilops tauschii	53.18	0.00e+00	630.00
IUUC-Aml-002021	Ailuropoda melanoleuca	74.01	0.00e+00	2045.00
IUUC-Atr-002868	Amborella trichopoda	51.83	5.00e-177	615.00
IUUC-Apl-003989	Anas platyrhynchos	64.44	0.00e+00	1683.00
IUUC-Aca-004609	Anolis carolinensis	64.67	0.00e+00	1307.00
IUUC-Aly-005912	Arabidopsis lyrata	52.34	1.00e-179	623.00
IUUC-Ath-006812	Arabidopsis thaliana	51.99	7.00e-179	621.00
IUUC-Ago-007719	Ashbya gossypii	52.27	4.00e-175	608.00
IUUC-Acl-008050	Aspergillus clavatus	53.52	8.00e-173	601.00
IUUC-Afl-008677	Aspergillus flavus	53.64	3.00e-163	569.00
IUUC-Afu-008975	Aspergillus fumigatus	53.35	4.00e-173	602.00
IUUC-Ani-009464	Aspergillus nidulans	53.08	9.00e-173	601.00
IUUC-Ang-009516	Aspergillus niger	53.09	1.00e-160	560.00
IUUC-Aor-010057	Aspergillus oryzae	53.45	2.00e-165	576.00
IUUC-Ate-010307	Aspergillus terreus	54.00	1.00e-162	567.00
IUUC-Ame-011055	Astyanax mexicanus	85.03	0.00e+00	1012.00
IUUC-Bgr-012211	Blumeria graminis	48.50	7.00e-161	561.00
IUUC-Bta-012761	Bos taurus	70.69	0.00e+00	1880.00
IUUC-Bci-013603	Botrytis cinerea	53.60	3.00e-175	608.00
IUUC-Bdi-014031	Brachypodium distachyon	53.09	0.00e+00	627.00
IUUC-Bol-015096	Brassica oleracea	52.84	0.00e+00	630.00
IUUC-Bra-017583	Brassica rapa	52.90	5.00e-180	625.00
IUUC-Cel-018275	Caenorhabditis elegans	37.45	4.00e-102	366.00
IUUC-Cja-019733	Callithrix jacchus	80.66	0.00e+00	1651.00
IUUC-Cfa-020631	Canis familiaris	71.37	0.00e+00	2014.00
IUUC-Cpo-022218	Cavia porcellus	73.95	0.00e+00	1455.00
IUUC-Cre-022710	Chlamydomonas reinhardtii	49.56	7.00e-148	519.00
IUUC-Csa-023723	Chlorocebus sabaeus	80.86	0.00e+00	1650.00
IUUC-Cho-024312	Choloepus hoffmanni	69.18	0.00e+00	878.00
IUUC-Cin-025376	Ciona intestinalis	66.85	0.00e+00	767.00
IUUC-Cgl-026654	Colletotrichum gloeosporioides	50.81	3.00e-157	549.00
IUUC-Cme-027109	Cyanidioschyzon merolae	51.43	1.00e-151	530.00
IUUC-Dre-028672	Danio rerio	62.70	0.00e+00	1190.00
IUUC-Dno-028893	Dasypus novemcinctus	73.53	0.00e+00	1920.00
IUUC-Dor-031114	Dipodomys ordii	65.36	0.00e+00	1678.00
IUUC-Dse-031225	Dothistroma septosporum	52.90	8.00e-177	614.00
IUUC-Ete-032713	Echinops telfairi	67.52	0.00e+00	885.00
IUUC-Eca-034071	Equus caballus	74.97	0.00e+00	2033.00
IUUC-Eeu-034781	Erinaceus europaeus	74.93	0.00e+00	1562.00
IUUC-Fca-036561	Felis catus	72.80	0.00e+00	2060.00
IUUC-Fal-037343	Ficedula albicollis	60.14	0.00e+00	1572.00
IUUC-Fox-037667	Fusarium oxysporum	51.64	2.00e-152	533.00
IUUC-Fso-038331	Fusarium solani	51.50	3.00e-155	543.00
IUUC-Gmo-039132	Gadus morhua	80.96	0.00e+00	956.00
IUUC-Gga-040376	Gallus gallus	73.97	0.00e+00	1402.00
IUUC-Gac-042326	Gasterosteus aculeatus	79.50	0.00e+00	957.00
IUUC-Gma-043401	Glycine max	50.87	3.00e-176	612.00
IUUC-Ggo-044844	Gorilla gorilla	80.76	0.00e+00	1647.00
IUUC-Hsa-046895	Homo sapiens	81.06	0.00e+00	1652.00
IUUC-Itr-048071	Ictidomys tridecemlineatus	73.88	0.00e+00	2036.00
IUUC-Kpa-049261	Komagataella pastoris	48.62	0.00e+00	628.00
IUUC-Lch-049934	Latimeria chalumnae	57.58	0.00e+00	1305.00
IUUC-Lpe-051249	Leersia perrieri	48.82	3.00e-144	506.00
IUUC-Loc-052591	Lepisosteus oculatus	60.40	0.00e+00	1481.00
IUUC-Lma-053210	Leptosphaeria maculans	51.09	1.00e-163	570.00
IUUC-Laf-054403	Loxodonta africana	74.39	0.00e+00	1966.00
IUUC-Mcc-054876	Macaca mulatta	80.76	0.00e+00	1644.00
IUUC-Meu-056545	Macropus eugenii	56.50	6.00e-110	392.00
IUUC-Mor-057145	Magnaporthe oryzae	50.35	1.00e-166	580.00
IUUC-Mpo-057493	Magnaporthe poae	51.06	7.00e-164	571.00
IUUC-Mtr-057734	Medicago truncatula	50.17	5.00e-175	608.00
IUUC-Mga-059402	Meleagris gallopavo	73.79	0.00e+00	1410.00
IUUC-Mmr-061791	Microcebus murinus	75.15	0.00e+00	2110.00
IUUC-Mdo-062148	Monodelphis domestica	66.31	0.00e+00	1755.00
IUUC-Mmu-063238	Mus musculus	72.25	0.00e+00	1965.00
IUUC-Mac-064440	Musa acuminata	50.62	3.00e-168	586.00
IUUC-Mpu-066112	Mustela putorius furo	74.15	0.00e+00	2061.00
IUUC-Mlu-067057	Myotis lucifugus	71.94	0.00e+00	2004.00
IUUC-Nfi-068617	Neosartorya fischeri	53.70	7.00e-173	601.00
IUUC-Ncr-068920	Neurospora crassa	51.41	3.00e-168	585.00
IUUC-Nle-069992	Nomascus leucogenys	80.66	0.00e+00	1645.00
IUUC-Opr-070929	Ochotona princeps	77.78	0.00e+00	1819.00
IUUC-Ont-071740	Oreochromis niloticus	83.36	0.00e+00	1011.00
IUUC-Oan-073380	Ornithorhynchus anatinus	67.57	0.00e+00	831.00
IUUC-Oba-075626	Oryza barthii	52.59	1.00e-176	613.00
IUUC-Obr-076240	Oryza brachyantha	52.15	1.00e-180	627.00
IUUC-Ogl-077187	Oryza glaberrima	52.59	1.00e-176	614.00
IUUC-Ogu-078629	Oryza glumaepatula	49.61	5.00e-140	492.00
IUUC-Oin-079268	Oryza indica	52.76	6.00e-177	615.00
IUUC-Olo-080567	Oryza longistaminata	49.02	3.00e-140	492.00
IUUC-Oni-082122	Oryza nivara	52.76	6.00e-177	614.00
IUUC-Opu-083477	Oryza punctata	52.24	0.00e+00	628.00
IUUC-Oru-084783	Oryza rufipogon	52.76	5.00e-177	615.00
IUUC-Osa-086206	Oryza sativa	52.76	3.00e-175	608.00
IUUC-Oga-088414	Otolemur garnettii	73.55	0.00e+00	2051.00
IUUC-Oar-089697	Ovis aries	74.95	0.00e+00	2057.00
IUUC-Ptr-090856	Pan troglodytes	81.26	0.00e+00	1660.00
IUUC-Pan-092521	Papio anubis	81.06	0.00e+00	1654.00
IUUC-Psi-093037	Pelodiscus sinensis	64.64	0.00e+00	1496.00
IUUC-Pma-094456	Petromyzon marinus	60.69	0.00e+00	798.00
IUUC-Pno-094861	Phaeosphaeria nodorum	50.70	9.00e-165	574.00
IUUC-Ppa-095711	Physcomitrella patens	50.26	1.00e-176	614.00
IUUC-Pfo-096223	Poecilia formosa	82.59	0.00e+00	1026.00
IUUC-Pab-098595	Pongo abelii	80.76	0.00e+00	1637.00
IUUC-Pop-099531	Populus trichocarpa	50.85	7.00e-178	618.00
IUUC-Pca-100770	Procavia capensis	72.05	0.00e+00	722.00
IUUC-Ppe-101528	Prunus persica	48.09	1.00e-176	613.00
IUUC-Pva-102247	Pteropus vampyrus	71.55	0.00e+00	1107.00
IUUC-Pte-104217	Pyrenophora teres	52.18	4.00e-166	578.00
IUUC-Pyt-104797	Pyrenophora triticirepentis	51.40	1.00e-167	584.00
IUUC-Rno-105742	Rattus norvegicus	72.43	0.00e+00	1952.00
IUUC-Sce-106234	Saccharomyces cerevisiae	52.46	2.00e-174	606.00
IUUC-Sha-106622	Sarcophilus harrisii	63.56	0.00e+00	1682.00
IUUC-Sja-107874	Schizosaccharomyces japonicus	54.15	0.00e+00	628.00
IUUC-Spo-108021	Schizosaccharomyces pombe	54.97	0.00e+00	632.00
IUUC-Ssl-108500	Sclerotinia sclerotiorum	53.95	3.00e-174	605.00
IUUC-Smo-109132	Selaginella moellendorffii	51.07	8.00e-171	594.00
IUUC-Sit-110066	Setaria italica	52.83	1.00e-180	627.00
IUUC-Sly-111833	Solanum lycopersicum	52.99	0.00e+00	632.00
IUUC-Stu-112189	Solanum tuberosum	52.82	0.00e+00	629.00
IUUC-Sar-113511	Sorex araneus	70.81	0.00e+00	1125.00
IUUC-Sbi-114606	Sorghum bicolor	52.83	0.00e+00	627.00
IUUC-Ssc-116374	Sus scrofa	74.97	0.00e+00	2100.00
IUUC-Tgu-117153	Taeniopygia guttata	56.66	0.00e+00	1471.00
IUUC-Tru-118178	Takifugu rubripes	61.57	0.00e+00	1229.00
IUUC-Tsy-119524	Tarsius syrichta	73.83	0.00e+00	2106.00
IUUC-Tni-120546	Tetraodon nigroviridis	60.33	0.00e+00	1131.00
IUUC-Tca-121065	Theobroma cacao	51.11	3.00e-177	615.00
IUUC-Tre-121868	Trichoderma reesei	51.08	2.00e-156	546.00
IUUC-Tvi-122455	Trichoderma virens	51.89	7.00e-154	538.00
IUUC-Tae-123249	Triticum aestivum	53.18	0.00e+00	630.00
IUUC-Tur-126107	Triticum urartu	53.18	0.00e+00	632.00
IUUC-Tbe-127967	Tupaia belangeri	73.42	0.00e+00	990.00
IUUC-Ttr-128768	Tursiops truncatus	74.73	0.00e+00	2113.00
IUUC-Vda-129884	Verticillium dahliae	51.70	4.00e-168	585.00
IUUC-Vpa-130521	Vicugna pacos	94.80	3.00e-161	563.00
IUUC-Vvi-130838	Vitis vinifera	51.29	2.00e-176	613.00
IUUC-Xtr-132056	Xenopus tropicalis	51.89	0.00e+00	1147.00
IUUC-Xma-133113	Xiphophorus maculatus	82.42	0.00e+00	1025.00
IUUC-Yli-134344	Yarrowia lipolytica	53.08	7.00e-179	621.00
IUUC-Zma-134837	Zea mays	52.29	2.00e-177	616.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence