iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111896

Ensembl Protein ID

Solyc07g006820.2.1

UniProt Accession

K4CBF3; K4CBF3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g006820.2	Solyc07g006820.2.1	Solyc07g006820.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.10e-11	43.7	628	702

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgip.peqqrLiykGkiLeddktLadyglkdgstihllekks 74
           +++++ksl g+  +l+v   +t++ LK k +kkl +  +e +++iy Gk+Leddk+L++ +++++s++hl++++ 
   Q: 628  MKIILKSLGGKGSKLHVAAEETISSLKSKASKKLDFKlSEPVKIIYCGKELEDDKSLSAQNVPPNSVLHLVRTRI 702
           78999******88**********************************************************9875 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MFGNVDYSGD LDVDYLDEDA KEHLAALADK LGPSLTEIDL SVKSPQESAD AAEQDYDEKA 60
EDAVDYEDID EQYEGPEVQT VTEEDLLLPK RDYFSTEISL TTLENRDSVF DDENYDEDDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTGGAA ATGTTGACTA CTCTGGTGAT CTCGATGTTG ACTACCTTGA CGAGGTGATT 60
TGCTCCTTTC TCCCCATGTA ATTTGACTGT CATACAATAT GCTGTGAGCC CCAAATTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR009067--TAF_II_230-bd
IPR022591--TFIID_sub1_DUF3591
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50053--UBIQUITIN_2

Pfam

PF00439--Bromodomain
PF12157--DUF3591
PF09247--TBP-binding
PF00240--ubiquitin

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00213--UBQ

Gene Ontology

GO:0005669--C:transcription factor TFIID complex
GO:0004402--F:histone acetyltransferase activity
GO:0001129--F:RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0043565--F:sequence-specific DNA binding
GO:0017025--F:TBP-class protein binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003084	Amborella trichopoda	61.82	0.00e+00	1281.00
IUUC-Aly-005900	Arabidopsis lyrata	50.03	0.00e+00	1495.00
IUUC-Ath-006976	Arabidopsis thaliana	51.25	0.00e+00	1505.00
IUUC-Bol-015982	Brassica oleracea	53.02	0.00e+00	1295.00
IUUC-Bra-017875	Brassica rapa	54.12	0.00e+00	1300.00
IUUC-Cel-018283	Caenorhabditis elegans	41.77	1.00e-09	59.30
IUUC-Cin-025450	Ciona intestinalis	38.46	2.00e-13	69.70
IUUC-Gma-043047	Glycine max	58.09	0.00e+00	1734.00
IUUC-Hvu-047343	Hordeum vulgare	47.69	0.00e+00	673.00
IUUC-Mpo-057370	Magnaporthe poae	31.07	3.00e-10	60.50
IUUC-Mac-064798	Musa acuminata	53.21	0.00e+00	1568.00
IUUC-Oan-073582	Ornithorhynchus anatinus	34.65	3.00e-09	57.40
IUUC-Oba-075663	Oryza barthii	54.01	0.00e+00	1176.00
IUUC-Obr-076214	Oryza brachyantha	56.69	0.00e+00	1209.00
IUUC-Ogl-077575	Oryza glaberrima	54.14	0.00e+00	1180.00
IUUC-Ogu-079017	Oryza glumaepatula	54.22	0.00e+00	1164.00
IUUC-Oin-079864	Oryza indica	55.17	0.00e+00	1170.00
IUUC-Olo-080777	Oryza longistaminata	54.38	0.00e+00	1168.00
IUUC-Ome-081474	Oryza meridionalis	55.09	0.00e+00	1171.00
IUUC-Oni-082068	Oryza nivara	55.44	0.00e+00	1177.00
IUUC-Opu-083274	Oryza punctata	56.94	0.00e+00	1079.00
IUUC-Oru-085067	Oryza rufipogon	55.01	0.00e+00	1166.00
IUUC-Ppa-095489	Physcomitrella patens	53.30	0.00e+00	941.00
IUUC-Pop-099371	Populus trichocarpa	57.14	0.00e+00	1740.00
IUUC-Ppe-101917	Prunus persica	58.54	0.00e+00	1465.00
IUUC-Rno-105098	Rattus norvegicus	31.50	2.00e-09	58.20
IUUC-Smo-109033	Selaginella moellendorffii	49.70	0.00e+00	855.00
IUUC-Sit-110106	Setaria italica	50.84	0.00e+00	1071.00
IUUC-Tca-121471	Theobroma cacao	59.00	0.00e+00	1547.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence