iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015816

Ensembl Protein ID

Bo3g023280.1

UniProt Accession

A0A0D3B3U9; A0A0D3B3U9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g023280	Bo3g023280.1	Bo3g023280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-25	88.2	222	256

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           gHt  vt  +f + +++v+Gs Dg++k+WD+  g 
   Q: 222  GHTKTVTYARFmDQHTIVTGSTDGSLKLWDIANGQ 256
           8**********85589**************87765 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MISSSSSPTT MDRDNNIPRF DWDLSFSAVV SSPSIGTDAI GAIEFDPSGE ILATGGIARK 60
IRIYRLNSLL GTSRDDDDDD HVESCICTPA KLSSLKWRPD LSGRVIGSGD YDGVVTEYDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATATCCT CCTCTTCATC TCCCACAACC ATGGACAGAG ACAACAACAT TCCTAGATTC 60
GACTGGGATC TCTCCTTCTC CGCCGTCGTG TCCTCCCCTT CCATTGGAAC CGACGCTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043496--P:regulation of protein homodimerization activity
GO:0010218--P:response to far red light
GO:0010114--P:response to red light
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	47.01	6.00e-82	297.00
IUUC-Aly-005955	Arabidopsis lyrata	82.99	3.00e-147	514.00
IUUC-Ath-006872	Arabidopsis thaliana	83.19	2.00e-148	518.00
IUUC-Bdi-014616	Brachypodium distachyon	45.09	1.00e-62	233.00
IUUC-Bra-016672	Brassica rapa	95.35	0.00e+00	654.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	38.93	4.00e-45	174.00
IUUC-Ogl-077687	Oryza glaberrima	45.33	1.00e-66	246.00
IUUC-Oin-079632	Oryza indica	44.79	2.00e-65	242.00
IUUC-Ome-081923	Oryza meridionalis	44.23	2.00e-63	235.00
IUUC-Oni-082448	Oryza nivara	44.92	2.00e-65	243.00
IUUC-Opu-083787	Oryza punctata	45.96	1.00e-79	290.00
IUUC-Oru-085278	Oryza rufipogon	44.23	2.00e-63	235.00
IUUC-Ppa-095960	Physcomitrella patens	36.89	1.00e-58	220.00
IUUC-Smo-109171	Selaginella moellendorffii	38.73	6.00e-63	234.00
IUUC-Sly-111536	Solanum lycopersicum	54.55	8.00e-110	389.00
IUUC-Tae-123036	Triticum aestivum	48.27	5.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence