iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099510

Ensembl Protein ID

POPTR_0012s13290.1

UniProt Accession

B9I4A1; B9I4A1_POPTR

Genbank Protein ID

EEE97039.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_662347; POPTR_0012s13290g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s13290	POPTR_0012s13290.1	POPTR_0012s13290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-20	72.1	172	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtll.vsGsdDgtikvWDlrt 32
           +v+++++   d+ l +sGsdDgt+++WD+r+
   Q: 172  RVWSVDYshWDPVLgASGSDDGTMQMWDTRC 202
           588887765358899*************876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKNLSTKFHR HSHHHTQESE NHEKEAIEEE QEQQEEKARC EWDFSLTTIV SSGNNNISST 60
PAISDALGVI EFDQTNSIIA TGGIARKIRI YNFKSLFAHE NTSQNAHEIT CLDHARACDY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTGTATCT TGCATGGGAA ATGAAAAACC TCTCCACTAA ATTCCATCGG CATAGTCACC 60
ACCACACACA AGAATCTGAA AACCACGAAA AAGAAGCCAT AGAGGAAGAA CAAGAACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0012s13290g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	45.34	6.00e-89	320.00
IUUC-Aly-005431	Arabidopsis lyrata	64.13	2.00e-120	424.00
IUUC-Ath-006939	Arabidopsis thaliana	64.13	1.00e-116	412.00
IUUC-Bdi-014616	Brachypodium distachyon	46.04	7.00e-66	243.00
IUUC-Bol-016424	Brassica oleracea	62.20	8.00e-105	372.00
IUUC-Bra-016672	Brassica rapa	57.79	2.00e-109	388.00
IUUC-Ogl-077687	Oryza glaberrima	42.08	1.00e-60	226.00
IUUC-Oin-079632	Oryza indica	41.85	9.00e-60	223.00
IUUC-Ome-081923	Oryza meridionalis	41.30	2.00e-57	216.00
IUUC-Oni-082448	Oryza nivara	41.85	6.00e-60	224.00
IUUC-Opu-083787	Oryza punctata	40.34	1.00e-72	266.00
IUUC-Oru-085278	Oryza rufipogon	41.30	2.00e-57	216.00
IUUC-Ppa-095874	Physcomitrella patens	36.89	3.00e-64	239.00
IUUC-Ppe-102088	Prunus persica	61.68	2.00e-133	468.00
IUUC-Smo-109171	Selaginella moellendorffii	35.03	3.00e-57	215.00
IUUC-Sly-111536	Solanum lycopersicum	64.02	5.00e-131	459.00
IUUC-Stu-112915	Solanum tuberosum	62.64	3.00e-133	467.00
IUUC-Tca-120952	Theobroma cacao	65.06	7.00e-147	513.00
IUUC-Tae-123013	Triticum aestivum	44.81	3.00e-68	251.00
IUUC-Vvi-131711	Vitis vinifera	63.97	6.00e-136	477.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence