iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112117

Ensembl Protein ID

PGSC0003DMT400026178

UniProt Accession

M1AMT0; M1AMT0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400010089	PGSC0003DMT400026178	PGSC0003DMT400026178

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-06	29.7	25	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
           +f C I +el +dP v+ +G+ y   ++ +wl+   +  +cPv+++ ++ee+lvP 
   Q: 25   DFECNICFELAQDPIVTLCGHLYCWPCLYRWLRLHSQchECPVCKALIQEEKLVPL 80
           699*****************************54444458**************96 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MQDSTTRAFE SSSFSSGDGN NDAGDFECNI CFELAQDPIV TLCGHLYCWP CLYRWLRLHS 60
QCHECPVCKA LIQEEKLVPL YGRGRTSTDP RSKPIPGLEI PNRPAGQRPE TAPQPEPNHF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAAATTAG AGATGAATTT AGGTAACAAC TCTGGGAGAC AGGGTGAAAA GCCCTAGATT 60
CTTTGAGTCA ATACTTGTTC AATACTAATA ATTGAAGGCT CAATTACCTC CTTTTAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102582225

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001155	Aegilops tauschii	50.23	1.00e-51	195.00
IUUC-Atr-002444	Amborella trichopoda	57.97	3.00e-58	216.00
IUUC-Aly-006065	Arabidopsis lyrata	58.20	8.00e-56	208.00
IUUC-Ath-007267	Arabidopsis thaliana	57.14	6.00e-55	206.00
IUUC-Ame-011316	Astyanax mexicanus	49.21	1.00e-25	107.00
IUUC-Bdi-014183	Brachypodium distachyon	64.19	2.00e-50	190.00
IUUC-Bol-016132	Brassica oleracea	57.53	8.00e-65	238.00
IUUC-Bra-017631	Brassica rapa	57.01	7.00e-64	235.00
IUUC-Csa-023595	Chlorocebus sabaeus	50.00	2.00e-25	107.00
IUUC-Dme-031966	Drosophila melanogaster	41.06	3.00e-25	107.00
IUUC-Eca-033642	Equus caballus	49.59	9.00e-26	108.00
IUUC-Gma-043248	Glycine max	61.76	6.00e-71	259.00
IUUC-Hsa-046046	Homo sapiens	50.00	2.00e-25	107.00
IUUC-Hvu-047043	Hordeum vulgare	51.92	5.00e-49	186.00
IUUC-Lpe-050836	Leersia perrieri	65.99	3.00e-56	212.00
IUUC-Loc-052118	Lepisosteus oculatus	53.62	4.00e-21	93.20
IUUC-Mcc-054833	Macaca mulatta	50.00	2.00e-25	107.00
IUUC-Mtr-058130	Medicago truncatula	58.54	8.00e-58	215.00
IUUC-Mac-065390	Musa acuminata	64.17	7.00e-62	228.00
IUUC-Nle-069705	Nomascus leucogenys	50.00	2.00e-25	107.00
IUUC-Oba-075461	Oryza barthii	50.22	3.00e-51	194.00
IUUC-Ogl-076945	Oryza glaberrima	55.92	7.00e-57	212.00
IUUC-Ogu-078463	Oryza glumaepatula	59.63	5.00e-49	186.00
IUUC-Oin-079606	Oryza indica	54.98	1.00e-55	208.00
IUUC-Olo-080378	Oryza longistaminata	55.92	7.00e-57	212.00
IUUC-Ome-081459	Oryza meridionalis	55.92	2.00e-56	211.00
IUUC-Oni-082738	Oryza nivara	55.92	4.00e-57	213.00
IUUC-Opu-083407	Oryza punctata	55.71	3.00e-57	213.00
IUUC-Oru-084757	Oryza rufipogon	59.63	5.00e-49	186.00
IUUC-Osa-086126	Oryza sativa	55.92	7.00e-57	212.00
IUUC-Ola-086507	Oryzias latipes	38.42	2.00e-27	114.00
IUUC-Pan-092843	Papio anubis	50.00	2.00e-25	107.00
IUUC-Ppa-095474	Physcomitrella patens	61.33	8.00e-52	195.00
IUUC-Pfo-096818	Poecilia formosa	36.41	3.00e-27	113.00
IUUC-Pab-098244	Pongo abelii	50.00	2.00e-25	107.00
IUUC-Pop-099017	Populus trichocarpa	60.00	8.00e-65	238.00
IUUC-Ppe-102011	Prunus persica	61.95	6.00e-72	262.00
IUUC-Pva-102249	Pteropus vampyrus	50.00	3.00e-26	110.00
IUUC-Smo-109663	Selaginella moellendorffii	53.17	7.00e-36	141.00
IUUC-Sit-109934	Setaria italica	54.07	9.00e-55	205.00
IUUC-Sly-111255	Solanum lycopersicum	97.57	4.00e-105	372.00
IUUC-Sbi-114116	Sorghum bicolor	68.92	5.00e-55	206.00
IUUC-Tca-121830	Theobroma cacao	68.81	6.00e-75	272.00
IUUC-Tae-124257	Triticum aestivum	64.43	1.00e-49	188.00
IUUC-Tur-126443	Triticum urartu	64.43	1.00e-49	188.00
IUUC-Vvi-131725	Vitis vinifera	57.21	1.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence