iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000004494.2	ENSCJAT00000008636.2	ENSCJAP00000008169.2
ENSCJAG00000004494.2	ENSCJAT00000008626.1	ENSCJAP00000008160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-20	73.6	178	217
ULD/UDP/UBQ/UBQ_PIM	1.10e-23	83.9	19	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 178  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 217
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f+++++++  v+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 19   VTITLKTLQQQTFKIRMEPKVEVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTK 96
           68*************************************************************************987 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

VACCVRIPGP PRSGPAMAVT ITLKTLQQQT FKIRMEPKVE VKVLKEKIEA EKGRDAFPVA 60
GQKLIYAGKI LSDDVPIRDY RIDEKNFVVV MVTKTKAGQG TSAPPEASPT AAPESSTSFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCGTGCGG CGCGGCTGGG CGCTAAAATG GCGGCGGCGT GAGTTGCATG TTGTGTGAGG 60
ATCCCGGGGC CGCCGCGTTT GCTCGGGCCC CGCCATGGCC GTCACCATCA CGCTCAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.11	3.00e-32	132.00
IUUC-Aml-001515	Ailuropoda melanoleuca	90.79	5.00e-152	530.00
IUUC-Atr-003116	Amborella trichopoda	41.15	1.00e-30	127.00
IUUC-Aca-004704	Anolis carolinensis	78.82	2.00e-111	395.00
IUUC-Aly-006159	Arabidopsis lyrata	35.81	7.00e-49	187.00
IUUC-Ani-009460	Aspergillus nidulans	38.80	4.00e-29	122.00
IUUC-Bgr-012056	Blumeria graminis	35.15	8.00e-21	94.40
IUUC-Bta-012377	Bos taurus	94.77	5.00e-146	510.00
IUUC-Bci-013933	Botrytis cinerea	36.82	8.00e-20	91.30
IUUC-Cel-018364	Caenorhabditis elegans	30.89	2.00e-24	106.00
IUUC-Cfa-020577	Canis familiaris	95.87	6.00e-153	533.00
IUUC-Cpo-021850	Cavia porcellus	91.32	3.00e-171	593.00
IUUC-Csa-023183	Chlorocebus sabaeus	98.35	2.00e-154	538.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	33.50	5.00e-21	95.10
IUUC-Cme-027260	Cyanidioschyzon merolae	26.54	7.00e-23	101.00
IUUC-Dno-030017	Dasypus novemcinctus	91.81	2.00e-129	455.00
IUUC-Dor-030358	Dipodomys ordii	83.52	7.00e-124	436.00
IUUC-Dme-032027	Drosophila melanogaster	38.63	2.00e-61	229.00
IUUC-Eca-033599	Equus caballus	92.92	4.00e-138	484.00
IUUC-Fca-036051	Felis catus	95.04	2.00e-150	525.00
IUUC-Gmo-038528	Gadus morhua	58.36	1.00e-86	313.00
IUUC-Gga-040133	Gallus gallus	86.51	6.00e-75	274.00
IUUC-Gac-042298	Gasterosteus aculeatus	60.62	4.00e-84	304.00
IUUC-Ggo-045084	Gorilla gorilla	98.42	4.00e-164	570.00
IUUC-Hsa-046614	Homo sapiens	98.62	4.00e-155	540.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	96.05	0.00e+00	628.00
IUUC-Lch-050563	Latimeria chalumnae	62.06	3.00e-102	365.00
IUUC-Loc-051758	Lepisosteus oculatus	62.23	8.00e-87	313.00
IUUC-Laf-054589	Loxodonta africana	95.59	1.00e-144	505.00
IUUC-Mcc-055860	Macaca mulatta	98.35	2.00e-154	538.00
IUUC-Meu-056459	Macropus eugenii	93.49	2.00e-104	372.00
IUUC-Mtr-058239	Medicago truncatula	34.02	2.00e-46	179.00
IUUC-Mmr-060819	Microcebus murinus	95.87	5.00e-164	570.00
IUUC-Mdo-062742	Monodelphis domestica	84.68	3.00e-143	501.00
IUUC-Mmu-063929	Mus musculus	93.39	2.00e-160	558.00
IUUC-Mac-065180	Musa acuminata	33.33	6.00e-42	164.00
IUUC-Mpu-066684	Mustela putorius furo	95.87	3.00e-155	541.00
IUUC-Mlu-067787	Myotis lucifugus	93.66	2.00e-148	518.00
IUUC-Nle-069846	Nomascus leucogenys	86.92	2.00e-133	468.00
IUUC-Ont-072271	Oreochromis niloticus	56.20	2.00e-87	316.00
IUUC-Oan-073572	Ornithorhynchus anatinus	79.34	3.00e-129	454.00
IUUC-Ocu-074968	Oryctolagus cuniculus	94.82	1.00e-103	370.00
IUUC-Oba-075392	Oryza barthii	38.71	7.00e-32	131.00
IUUC-Obr-076660	Oryza brachyantha	34.26	3.00e-44	172.00
IUUC-Ogu-078883	Oryza glumaepatula	38.71	6.00e-32	131.00
IUUC-Oin-079817	Oryza indica	38.71	7.00e-32	131.00
IUUC-Olo-080929	Oryza longistaminata	38.71	5.00e-32	131.00
IUUC-Ome-081866	Oryza meridionalis	38.71	5.00e-32	131.00
IUUC-Oni-083092	Oryza nivara	38.71	7.00e-32	131.00
IUUC-Opu-083756	Oryza punctata	39.44	1.00e-33	137.00
IUUC-Oru-084816	Oryza rufipogon	38.71	7.00e-32	131.00
IUUC-Osa-086112	Oryza sativa	38.71	7.00e-32	131.00
IUUC-Oga-089075	Otolemur garnettii	95.26	1.00e-155	542.00
IUUC-Oar-090387	Ovis aries	93.95	3.00e-151	527.00
IUUC-Ptr-090912	Pan troglodytes	95.87	1.00e-146	512.00
IUUC-Pan-092140	Papio anubis	97.89	1.00e-162	565.00
IUUC-Psi-093347	Pelodiscus sinensis	66.56	3.00e-68	251.00
IUUC-Pno-095064	Phaeosphaeria nodorum	35.32	2.00e-16	80.50
IUUC-Pfo-096607	Poecilia formosa	63.71	2.00e-94	338.00
IUUC-Pab-097738	Pongo abelii	96.14	6.00e-152	530.00
IUUC-Pop-099642	Populus trichocarpa	34.72	3.00e-47	182.00
IUUC-Pca-100348	Procavia capensis	92.86	2.00e-143	501.00
IUUC-Ppe-101522	Prunus persica	35.68	2.00e-48	186.00
IUUC-Pva-102412	Pteropus vampyrus	95.87	1.00e-153	535.00
IUUC-Pgr-103618	Puccinia graminis	37.31	5.00e-25	108.00
IUUC-Rno-105569	Rattus norvegicus	93.66	3.00e-148	518.00
IUUC-Sha-106918	Sarcophilus harrisii	85.47	7.00e-129	453.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	35.37	9.00e-42	164.00
IUUC-Smo-109518	Selaginella moellendorffii	37.60	2.00e-31	129.00
IUUC-Sit-109813	Setaria italica	35.16	7.00e-45	174.00
IUUC-Sbi-113871	Sorghum bicolor	38.52	1.00e-31	130.00
IUUC-Ssc-115460	Sus scrofa	95.00	8.00e-162	562.00
IUUC-Tru-117920	Takifugu rubripes	67.12	9.00e-69	253.00
IUUC-Tsy-119385	Tarsius syrichta	80.15	7.00e-70	256.00
IUUC-Tni-120493	Tetraodon nigroviridis	59.89	4.00e-93	334.00
IUUC-Tca-121594	Theobroma cacao	35.79	6.00e-49	187.00
IUUC-Tre-121911	Trichoderma reesei	33.58	6.00e-28	118.00
IUUC-Tur-126610	Triticum urartu	38.11	9.00e-33	135.00
IUUC-Tme-127092	Tuber melanosporum	35.10	1.00e-23	103.00
IUUC-Tbe-127603	Tupaia belangeri	84.67	3.00e-55	208.00
IUUC-Ttr-129232	Tursiops truncatus	85.67	2.00e-142	498.00
IUUC-Vda-129946	Verticillium dahliae	33.33	3.00e-20	92.80
IUUC-Xma-133647	Xiphophorus maculatus	63.04	5.00e-92	331.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence