iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.40e-15	55.0	115	149
ULD/UDP/UBQ/UBQ_PIM	3.90e-16	58.8	1	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 7    leqlveMGFdreealqaLraannnleaAveyLldg 41
           +  l++MG+ +ee++ aLra++n++e+A+eyL++g
   Q: 115  VSDLMSMGYGEEEVRSALRASFNHPERAIEYLING 149
           5689****************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg..vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           mkl ++ l++++++le++e++ v +lK+k+       +p+e+++LIy+G+i++D+ +Lse+ i ++++++l++kk+
   Q: 1    MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEvaMPAENLQLIYSGRIMEDAMPLSEYRIAEDKIIVLMGKKK 76
           89****************************987775599**********************************986 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MKLSIRMLDQ RTITLEMNES QEVRALKQKL GNLPEVAMPA ENLQLIYSGR IMEDAMPLSE 60
YRIAEDKIIV LMGKKKVDKS SPEEKVAPTP PLAAGPNVLR TEDVVPSLAP NDQWVSDLMS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCACATA ACTATCACAA ATTCTCGCAG CCAAATTAAG TTTAACAAAA CAAAAACGAT 60
GAAGCTGTCT ATACGCATGC TGGACCAACG CACCATCACT TTGGAGATGA ACGAATCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

dme:Dmel_CG10694

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Kpa-049314	Komagataella pastoris	25.07	9.00e-27	113.00
IUUC-Mla-058961	Melampsora laricipopulina	31.65	7.00e-16	77.40
IUUC-Pca-100348	Procavia capensis	28.22	1.00e-26	113.00
IUUC-Smo-109518	Selaginella moellendorffii	25.61	1.00e-17	83.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence