iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099826

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_806221; POPTR_0012s03370g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s03370	POPTR_0012s03370.1	POPTR_0012s03370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.2	201	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+++f   ++ +  pC+H++h+dC+  w         + +CP+Cr
   Q: 201  CAVCKDSFelGEEAKQIPCKHIYHKDCITPW------LELHNSCPVCR 242
           ********8845599****************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSTGGVGVP QLYFCYQCDR TVTITPSPTS DLSCPNCQEG FLEECESPNP SSNPVDSGLG 60
PAILLDEFAS IFGGMAPTPR SSNNSTTTNS SSASPLFQDP DGFNPFAFLQ NYLQTMRAGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGCTTA CTCACAAAAA TTCAAAAATC AGAAAATCCC ATTTTAATCC TTCAATAAAA 60
ATAGTCATGT CTTCCACCGG CGGCGTCGGC GTCCCGCAAC TCTACTTCTG TTACCAGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0012s03370g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025452	Ciona intestinalis	39.67	2.00e-19	87.00
IUUC-Dse-031376	Dothistroma septosporum	40.91	7.00e-17	81.60
IUUC-Gma-044213	Glycine max	60.08	2.00e-76	278.00
IUUC-Mtr-057717	Medicago truncatula	64.91	1.00e-62	232.00
IUUC-Mla-058832	Melampsora laricipopulina	48.61	1.00e-18	85.10
IUUC-Ncr-068908	Neurospora crassa	37.14	2.00e-19	89.70
IUUC-Obr-076643	Oryza brachyantha	61.73	4.00e-57	214.00
IUUC-Ppa-095683	Physcomitrella patens	57.59	1.00e-54	206.00
IUUC-Spo-108354	Schizosaccharomyces pombe	32.56	4.00e-18	85.90
IUUC-Smo-109651	Selaginella moellendorffii	69.79	1.00e-40	157.00
IUUC-Sly-111477	Solanum lycopersicum	59.42	8.00e-85	306.00
IUUC-Stu-112212	Solanum tuberosum	59.42	4.00e-84	304.00
IUUC-Tre-122013	Trichoderma reesei	41.12	4.00e-20	92.40
IUUC-Tme-127143	Tuber melanosporum	40.95	2.00e-21	95.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence