iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016970

Ensembl Protein ID

Bra026728.1-P

UniProt Accession

M4ED68; M4ED68_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026728	Bra026728.1	Bra026728.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-24	86.8	144	184
ULD/UDP/UBQ/UBQ_PIM	2.40e-22	79.7	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           e++++q++eMG   +d+e++ +aLraa+nn+e+Av+yL++g
   Q: 144  EQMVQQIMEMGggsWDKETVARALRAAYNNPERAVDYLYSG 184
           99************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkltvktlkg++fe++v + dt+ ++K++i+++++   +p+ qq LI++Gk+LkD+ttL e+++ ++ +++++++ksk
   Q: 1    MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSkdnYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSK 78
           99*******************************99999*************************************997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKLTVKTLKG SHFEIRVLPT DTIMAVKKNI EDSQSKDNYP CGQQLLIHNG KVLKDETTLV 60
ENKVTEEGFL VVMLSKSKTA SSAGPSSAQP TSTTTSSAMP AAASTTHSIP VPASVSTLAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCA CCGTCAAGAC TCTCAAGGGT AGCCATTTTG AAATCAGGGT TCTGCCCACC 60
GACACGGTCA GTCCTTTGTC TCCTTCGTTC AGATCTACTA CGTGTAATTT TGTATGCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000088	Aegilops tauschii	55.10	1.00e-87	317.00
IUUC-Aml-001515	Ailuropoda melanoleuca	34.81	3.00e-43	169.00
IUUC-Atr-002756	Amborella trichopoda	62.60	3.00e-121	427.00
IUUC-Aca-004704	Anolis carolinensis	34.65	9.00e-42	163.00
IUUC-Aly-005694	Arabidopsis lyrata	86.30	8.00e-165	572.00
IUUC-Ath-007157	Arabidopsis thaliana	83.97	6.00e-161	559.00
IUUC-Acl-008212	Aspergillus clavatus	34.24	6.00e-37	147.00
IUUC-Afl-008605	Aspergillus flavus	33.93	4.00e-36	145.00
IUUC-Afu-008877	Aspergillus fumigatus	34.34	2.00e-38	152.00
IUUC-Ani-009460	Aspergillus nidulans	35.66	6.00e-36	144.00
IUUC-Aor-010032	Aspergillus oryzae	33.84	2.00e-37	149.00
IUUC-Ate-010458	Aspergillus terreus	38.07	6.00e-42	164.00
IUUC-Ame-011342	Astyanax mexicanus	35.36	3.00e-37	149.00
IUUC-Bta-012377	Bos taurus	34.90	1.00e-46	179.00
IUUC-Bci-013933	Botrytis cinerea	36.83	4.00e-37	148.00
IUUC-Bdi-014355	Brachypodium distachyon	63.78	6.00e-109	387.00
IUUC-Bol-015272	Brassica oleracea	92.84	1.00e-180	625.00
IUUC-Cel-018364	Caenorhabditis elegans	27.58	2.00e-19	89.40
IUUC-Cfa-020683	Canis familiaris	38.79	5.00e-30	125.00
IUUC-Cpo-021850	Cavia porcellus	36.27	2.00e-50	192.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.70	4.00e-26	112.00
IUUC-Csa-023714	Chlorocebus sabaeus	33.98	1.00e-44	173.00
IUUC-Cin-025741	Ciona intestinalis	26.40	5.00e-29	121.00
IUUC-Cme-027260	Cyanidioschyzon merolae	30.29	1.00e-30	126.00
IUUC-Dre-028369	Danio rerio	33.42	2.00e-46	179.00
IUUC-Dor-030358	Dipodomys ordii	40.51	1.00e-33	136.00
IUUC-Dme-032027	Drosophila melanogaster	29.98	8.00e-42	164.00
IUUC-Eca-034243	Equus caballus	38.79	2.00e-31	129.00
IUUC-Fca-036051	Felis catus	35.68	8.00e-49	187.00
IUUC-Fal-037148	Ficedula albicollis	41.53	2.00e-32	132.00
IUUC-Gmo-038528	Gadus morhua	36.47	5.00e-48	184.00
IUUC-Gga-040133	Gallus gallus	35.61	7.00e-31	127.00
IUUC-Gac-042298	Gasterosteus aculeatus	34.28	7.00e-44	170.00
IUUC-Gma-044245	Glycine max	69.02	3.00e-135	474.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	36.88	2.00e-52	199.00
IUUC-Kpa-049314	Komagataella pastoris	30.38	2.00e-34	139.00
IUUC-Lch-050563	Latimeria chalumnae	36.60	1.00e-41	163.00
IUUC-Lpe-051168	Leersia perrieri	62.09	4.00e-110	390.00
IUUC-Laf-054589	Loxodonta africana	33.67	3.00e-46	178.00
IUUC-Mcc-055860	Macaca mulatta	34.77	2.00e-47	182.00
IUUC-Meu-056459	Macropus eugenii	42.37	7.00e-37	147.00
IUUC-Mor-057287	Magnaporthe oryzae	33.67	8.00e-20	91.30
IUUC-Mtr-058239	Medicago truncatula	63.49	8.00e-127	446.00
IUUC-Mla-058961	Melampsora laricipopulina	43.17	3.00e-23	102.00
IUUC-Mvi-060220	Microbotryum violaceum	49.21	3.00e-24	106.00
IUUC-Mdo-062742	Monodelphis domestica	34.13	1.00e-52	200.00
IUUC-Mmu-063929	Mus musculus	36.88	5.00e-50	191.00
IUUC-Mac-064468	Musa acuminata	61.18	1.00e-115	409.00
IUUC-Mpu-066684	Mustela putorius furo	36.62	5.00e-48	184.00
IUUC-Mlu-067787	Myotis lucifugus	34.88	9.00e-48	183.00
IUUC-Nfi-068390	Neosartorya fischeri	34.76	5.00e-33	134.00
IUUC-Ont-072484	Oreochromis niloticus	33.65	4.00e-49	188.00
IUUC-Oan-073572	Ornithorhynchus anatinus	34.52	3.00e-46	178.00
IUUC-Oba-074972	Oryza barthii	62.47	4.00e-112	397.00
IUUC-Obr-076909	Oryza brachyantha	64.86	1.00e-116	412.00
IUUC-Ogl-077067	Oryza glaberrima	64.59	4.00e-118	417.00
IUUC-Oin-079203	Oryza indica	63.96	5.00e-117	414.00
IUUC-Opu-083963	Oryza punctata	59.95	5.00e-108	383.00
IUUC-Osa-085951	Oryza sativa	64.23	5.00e-117	414.00
IUUC-Ola-086540	Oryzias latipes	35.63	4.00e-31	128.00
IUUC-Oar-090387	Ovis aries	34.81	9.00e-45	173.00
IUUC-Pan-092140	Papio anubis	34.77	2.00e-47	182.00
IUUC-Ppa-095964	Physcomitrella patens	50.26	3.00e-89	321.00
IUUC-Pfo-096607	Poecilia formosa	37.22	1.00e-46	179.00
IUUC-Pab-097738	Pongo abelii	35.09	6.00e-43	167.00
IUUC-Pop-099726	Populus trichocarpa	64.23	8.00e-122	429.00
IUUC-Pca-100348	Procavia capensis	34.28	1.00e-45	176.00
IUUC-Ppe-101522	Prunus persica	70.56	5.00e-133	466.00
IUUC-Pva-102412	Pteropus vampyrus	35.53	2.00e-46	179.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	31.31	2.00e-25	109.00
IUUC-Rno-105569	Rattus norvegicus	34.55	4.00e-46	178.00
IUUC-Sce-106214	Saccharomyces cerevisiae	32.85	2.00e-13	69.70
IUUC-Sha-106918	Sarcophilus harrisii	33.60	2.00e-42	166.00
IUUC-Spo-108298	Schizosaccharomyces pombe	36.36	2.00e-44	172.00
IUUC-Smo-109129	Selaginella moellendorffii	53.25	4.00e-93	334.00
IUUC-Sit-109813	Setaria italica	58.70	1.00e-104	372.00
IUUC-Sly-111349	Solanum lycopersicum	67.56	4.00e-125	440.00
IUUC-Stu-112306	Solanum tuberosum	66.05	5.00e-119	420.00
IUUC-Sbi-114459	Sorghum bicolor	62.33	2.00e-113	401.00
IUUC-Ssc-115460	Sus scrofa	35.48	1.00e-46	180.00
IUUC-Tgu-116918	Taeniopygia guttata	34.88	3.00e-47	182.00
IUUC-Tni-120493	Tetraodon nigroviridis	36.49	7.00e-47	180.00
IUUC-Tca-121594	Theobroma cacao	66.41	2.00e-127	448.00
IUUC-Tre-121911	Trichoderma reesei	33.51	1.00e-32	133.00
IUUC-Tvi-122617	Trichoderma virens	36.97	2.00e-39	155.00
IUUC-Tae-123231	Triticum aestivum	65.58	2.00e-114	405.00
IUUC-Tur-126144	Triticum urartu	54.84	3.00e-101	361.00
IUUC-Ttr-128464	Tursiops truncatus	38.79	3.00e-31	129.00
IUUC-Xtr-132679	Xenopus tropicalis	29.43	3.00e-24	105.00
IUUC-Xma-133503	Xiphophorus maculatus	32.84	6.00e-47	181.00
IUUC-Yli-134615	Yarrowia lipolytica	31.23	4.00e-37	148.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence