iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014649

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000880

Gene Name

LOC100825276; BRADI_1g44740

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G44740	BRADI1G44740.1	BRADI1G44740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-16	59.2	36	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawcee 71
           p+eflCpIs+ lM dPv++p G+t++r++I+ + a      Pv  +++     +  l+Pn +lr+ i +wc++
   Q: 36   PAEFLCPISGRLMADPVIVPPGQTFERACIQACAALAFY-PPVVAAEVlpssPPLVLIPNVALRSAILNWCDR 107
           99********************************99998.55555554254344567**************86 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGSGRLRWRP FTAFASSSPP SSASSSPSSS FTVDQPAEFL CPISGRLMAD PVIVPPGQTF 60
ERACIQACAA LAFYPPVVAA EVLPSSPPLV LIPNVALRSA ILNWCDRLML PHPSPLPLDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCAGCG GCCGGCTGCG GTGGAGGCCA TTCACGGCCT TCGCTTCCTC CTCGCCGCCT 60
TCCTCCGCGT CGTCGTCACC GTCCTCTTCG TTCACGGTGG ACCAGCCAGC GGAGTTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100825276

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	41.64	7.00e-52	197.00
IUUC-Aly-005518	Arabidopsis lyrata	36.23	9.00e-68	250.00
IUUC-Ath-006703	Arabidopsis thaliana	35.24	5.00e-74	271.00
IUUC-Bol-015923	Brassica oleracea	39.88	8.00e-50	190.00
IUUC-Bra-016715	Brassica rapa	37.71	7.00e-46	177.00
IUUC-Gma-043475	Glycine max	41.10	8.00e-51	194.00
IUUC-Lpe-050893	Leersia perrieri	72.21	2.00e-157	548.00
IUUC-Mtr-057660	Medicago truncatula	41.58	3.00e-45	175.00
IUUC-Mac-064560	Musa acuminata	54.81	9.00e-101	359.00
IUUC-Obr-076058	Oryza brachyantha	43.32	2.00e-38	152.00
IUUC-Ogl-077033	Oryza glaberrima	70.29	7.00e-134	469.00
IUUC-Ogu-078087	Oryza glumaepatula	73.33	2.00e-105	375.00
IUUC-Oin-079818	Oryza indica	78.42	5.00e-94	336.00
IUUC-Ome-081313	Oryza meridionalis	71.48	1.00e-135	475.00
IUUC-Oni-082747	Oryza nivara	70.49	2.00e-134	471.00
IUUC-Opu-084021	Oryza punctata	70.46	1.00e-153	535.00
IUUC-Oru-084445	Oryza rufipogon	70.79	6.00e-133	467.00
IUUC-Osa-085410	Oryza sativa	70.87	4.00e-135	474.00
IUUC-Ppa-095595	Physcomitrella patens	38.83	7.00e-31	128.00
IUUC-Pop-099183	Populus trichocarpa	42.86	4.00e-46	178.00
IUUC-Ppe-101810	Prunus persica	36.38	8.00e-78	283.00
IUUC-Ptt-103922	Puccinia triticina	36.47	3.00e-09	55.10
IUUC-Smo-109005	Selaginella moellendorffii	33.56	7.00e-44	171.00
IUUC-Sit-109782	Setaria italica	74.29	1.00e-162	565.00
IUUC-Sly-111131	Solanum lycopersicum	38.35	1.00e-78	286.00
IUUC-Stu-112864	Solanum tuberosum	39.14	1.00e-75	276.00
IUUC-Sbi-113814	Sorghum bicolor	71.69	2.00e-147	514.00
IUUC-Tca-121304	Theobroma cacao	40.26	4.00e-56	211.00
IUUC-Tae-123306	Triticum aestivum	77.35	0.00e+00	684.00
IUUC-Vvi-131041	Vitis vinifera	37.74	1.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence