iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043729

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000839

Gene Name

LOC100815075; GLYMA_06G185400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G19730	GLYMA06G19730.1	GLYMA06G19730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-16	61.0	20	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+ef CpIs+ lM+dPvv++sG+t++r +++ + + + +    ++++ + ++l+Pnl+++ +i +wc+  +
   Q: 20   PPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKDLNFSPKLDDGTRPDFSTLIPNLAIKTTILHWCDNAR 91
           79********************************999999888899999999****************9865 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGGNGKHRWK FSFHRSSTHP PKEFTCPISG SLMSDPVVVA SGQTFERLAV QLCKDLNFSP 60
KLDDGTRPDF STLIPNLAIK TTILHWCDNA RTQHPRPPDY ASLQRLVLEQ KENDRVRVSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATTGCTCT GGTTAAACAC TTGATTAGGC AGTGACTTTT CAGAGTTCTG GTAGACAAAA 60
TAATTACTAA CTTTAAAAAA AGTAACAAAA AATCATAAAT CATAAATCAT AAATCATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100815075

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	46.93	2.00e-79	290.00
IUUC-Lpe-050893	Leersia perrieri	35.73	1.00e-53	204.00
IUUC-Mtr-057660	Medicago truncatula	73.82	0.00e+00	654.00
IUUC-Mac-064560	Musa acuminata	45.02	1.00e-51	197.00
IUUC-Ogl-077033	Oryza glaberrima	40.67	7.00e-34	138.00
IUUC-Ogu-078087	Oryza glumaepatula	41.00	2.00e-34	139.00
IUUC-Oin-079818	Oryza indica	38.94	6.00e-32	131.00
IUUC-Olo-080764	Oryza longistaminata	40.17	1.00e-32	133.00
IUUC-Ome-081313	Oryza meridionalis	41.00	1.00e-34	140.00
IUUC-Oni-082747	Oryza nivara	41.33	6.00e-35	142.00
IUUC-Oru-084445	Oryza rufipogon	41.33	1.00e-34	142.00
IUUC-Osa-085410	Oryza sativa	41.00	9.00e-35	141.00
IUUC-Ppa-095595	Physcomitrella patens	45.61	1.00e-49	191.00
IUUC-Ppe-101245	Prunus persica	63.72	1.00e-171	595.00
IUUC-Smo-109005	Selaginella moellendorffii	39.46	1.00e-41	164.00
IUUC-Sit-109782	Setaria italica	34.93	4.00e-52	198.00
IUUC-Sly-111131	Solanum lycopersicum	55.38	1.00e-135	476.00
IUUC-Tae-123306	Triticum aestivum	37.86	8.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence