iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064560

Ensembl Protein ID

GSMUA_Achr3P06000_001

UniProt Accession

M0SC68; M0SC68_MUSAM

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr3G06000_001	GSMUA_Achr3T06000_001	GSMUA_Achr3P06000_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-15	58.0	36	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedl..vPnltlrrliqawcee 71
            eflCpIs  lM dPv++p sG+t++rs+++ + +   +  P  + +l+++ l  +Pn +l++ i +wc++
   Q: 36   VEFLCPISRSLMADPVIVPpSGHTFERSCVQACADLAFS-PPGLSLELSPSPLvlIPNVALKSAILSWCQS 105
           69*******************************999998.999999996666555**************97 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MGSRKPFWRF SNDHRSCTSA SSTSPVSSIT AAEMAVEFLC PISRSLMADP VIVPPSGHTF 60
ERSCVQACAD LAFSPPGLSL ELSPSPLVLI PNVALKSAIL SWCQSIGVPP PQPMPPDAAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAAGCC GCAAGCCCTT TTGGAGGTTC TCCAACGACC ACCGCTCGTG TACCTCCGCC 60
TCGAGCACCT CGCCTGTGTC CTCCATAACG GCGGCGGAGA TGGCCGTGGA GTTCCTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	44.17	1.00e-58	220.00
IUUC-Ath-006703	Arabidopsis thaliana	38.29	1.00e-71	263.00
IUUC-Bdi-014649	Brachypodium distachyon	53.92	2.00e-114	405.00
IUUC-Bol-015923	Brassica oleracea	44.41	4.00e-54	205.00
IUUC-Bra-016715	Brassica rapa	45.45	3.00e-50	192.00
IUUC-Gma-043729	Glycine max	47.08	1.00e-61	230.00
IUUC-Lpe-050893	Leersia perrieri	54.00	4.00e-101	361.00
IUUC-Mtr-057660	Medicago truncatula	46.29	4.00e-50	191.00
IUUC-Mmr-061778	Microcebus murinus	29.50	3.00e-09	55.10
IUUC-Ogl-077033	Oryza glaberrima	52.53	2.00e-84	305.00
IUUC-Ogu-078087	Oryza glumaepatula	58.33	3.00e-71	261.00
IUUC-Oin-079818	Oryza indica	58.82	5.00e-66	243.00
IUUC-Ome-081313	Oryza meridionalis	52.16	4.00e-85	308.00
IUUC-Oni-082747	Oryza nivara	53.16	1.00e-85	309.00
IUUC-Opu-084021	Oryza punctata	52.63	6.00e-94	337.00
IUUC-Oru-084445	Oryza rufipogon	53.16	1.00e-84	307.00
IUUC-Osa-085410	Oryza sativa	52.95	1.00e-84	306.00
IUUC-Pop-099467	Populus trichocarpa	45.55	4.00e-57	215.00
IUUC-Ppe-101245	Prunus persica	44.30	3.00e-61	228.00
IUUC-Smo-109005	Selaginella moellendorffii	38.43	2.00e-35	142.00
IUUC-Sit-109782	Setaria italica	52.66	5.00e-97	347.00
IUUC-Sly-111131	Solanum lycopersicum	38.85	8.00e-78	283.00
IUUC-Sbi-113814	Sorghum bicolor	55.26	2.00e-95	342.00
IUUC-Tca-121304	Theobroma cacao	38.04	4.00e-70	258.00
IUUC-Tae-125536	Triticum aestivum	54.55	4.00e-115	407.00
IUUC-Vvi-131041	Vitis vinifera	41.87	3.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence