iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075532

Ensembl Protein ID

OBART09G08720.1

UniProt Accession

A0A0D3H6C8; A0A0D3H6C8_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART09G08720	OBART09G08720.1	OBART09G08720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-32	112.6	207	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ef+C+I + lM dPv+lpsG+ty+r++++ + +      P  + +  ++ ++Pn +l++ i  wc+++
   Q: 207  PPPEFVCSILGALMADPVILPSGQTYERACLQACAELAFL--PPGMGSA-SDAVIPNAALKAAIGTWCARS 274
           69********************************777765..5555444.7999**************986 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MGAGRPRRWK LPFHRSAPSS PSSPPDPEPH SPARSAVVVV AEEEAPPAEF VCSILGALMA 60
DPVILPSGQT YERACLQACA ELAFLPPGMG SASDAVIPNA ALKAAIGTWC ARSGRVVPAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGCGG GCCGCCCTCG CCGCTGGAAG CTGCCGTTCC ACCGCAGCGC GCCGTCGTCT 60
CCCTCCTCCC CGCCGGACCC CGAGCCCCAC TCGCCTGCGC GTTCGGCGGT TGTTGTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	47.21	1.00e-47	183.00
IUUC-Aly-005887	Arabidopsis lyrata	39.86	1.00e-43	170.00
IUUC-Ath-007165	Arabidopsis thaliana	39.53	6.00e-44	171.00
IUUC-Bdi-014040	Brachypodium distachyon	72.55	7.00e-147	513.00
IUUC-Bol-015508	Brassica oleracea	44.33	3.00e-44	172.00
IUUC-Bra-017927	Brassica rapa	43.82	1.00e-44	174.00
IUUC-Hvu-047842	Hordeum vulgare	60.85	4.00e-44	172.00
IUUC-Lpe-050705	Leersia perrieri	83.77	0.00e+00	630.00
IUUC-Mtr-057660	Medicago truncatula	43.97	7.00e-37	147.00
IUUC-Mac-064827	Musa acuminata	49.61	4.00e-84	304.00
IUUC-Ogl-076997	Oryza glaberrima	98.99	0.00e+00	711.00
IUUC-Ogu-078801	Oryza glumaepatula	94.58	0.00e+00	708.00
IUUC-Oin-080208	Oryza indica	94.58	0.00e+00	711.00
IUUC-Olo-080764	Oryza longistaminata	64.91	1.00e-60	226.00
IUUC-Ome-081170	Oryza meridionalis	96.38	0.00e+00	676.00
IUUC-Oni-082195	Oryza nivara	94.79	0.00e+00	675.00
IUUC-Opu-083643	Oryza punctata	90.96	0.00e+00	638.00
IUUC-Oru-084355	Oryza rufipogon	94.78	0.00e+00	711.00
IUUC-Osa-086173	Oryza sativa	94.78	0.00e+00	711.00
IUUC-Pop-099183	Populus trichocarpa	41.67	7.00e-38	151.00
IUUC-Ppe-101245	Prunus persica	44.16	2.00e-47	182.00
IUUC-Smo-109005	Selaginella moellendorffii	36.43	9.00e-34	137.00
IUUC-Sit-110079	Setaria italica	74.17	8.00e-148	516.00
IUUC-Sly-111131	Solanum lycopersicum	38.59	4.00e-63	234.00
IUUC-Stu-112864	Solanum tuberosum	39.57	7.00e-63	234.00
IUUC-Sbi-114055	Sorghum bicolor	78.03	5.00e-100	357.00
IUUC-Tca-121304	Theobroma cacao	41.02	2.00e-45	176.00
IUUC-Tae-123319	Triticum aestivum	80.43	8.00e-172	596.00
IUUC-Vvi-131041	Vitis vinifera	45.61	1.00e-37	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence