iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078087

Ensembl Protein ID

OGLUM06G09340.1

UniProt Accession

A0A0E0A7B2; A0A0E0A7B2_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM06G09340	OGLUM06G09340.1	OGLUM06G09340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-12	48.6	31	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwla 37
           +p+eflCpIs++lM dPvv+p G+t++r++I+ + a
   Q: 31   PPAEFLCPISGTLMADPVVVPPGQTFERACIQACAA 66
           79******************************9965 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MATAWPRWRP SSQPMPSSPS SSPSSSFTAD PPAEFLCPIS GTLMADPVVV PPGQTFERAC 60
IQACAALAFS PPAVAADLSS LPPSASSPLV LVPNAPPPPP PASSVRTRSY YSDDLVQQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACCG CCTGGCCACG GTGGCGGCCG TCCTCGCAGC CGATGCCGTC CTCGCCGTCG 60
TCGTCGCCGT CGTCGTCGTT CACGGCGGAC CCGCCGGCGG AGTTCCTCTG CCCGATCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	41.39	1.00e-55	210.00
IUUC-Aly-006242	Arabidopsis lyrata	41.53	9.00e-56	210.00
IUUC-Ath-007483	Arabidopsis thaliana	41.53	1.00e-55	210.00
IUUC-Ago-007854	Ashbya gossypii	34.90	2.00e-16	79.70
IUUC-Bdi-014649	Brachypodium distachyon	65.48	7.00e-149	520.00
IUUC-Bol-015508	Brassica oleracea	43.35	2.00e-57	216.00
IUUC-Bra-017927	Brassica rapa	43.69	6.00e-58	218.00
IUUC-Gma-043729	Glycine max	43.71	2.00e-54	206.00
IUUC-Lpe-050893	Leersia perrieri	71.17	3.00e-157	547.00
IUUC-Mtr-057660	Medicago truncatula	42.96	1.00e-43	170.00
IUUC-Mac-064560	Musa acuminata	58.02	3.00e-82	298.00
IUUC-Ogl-077033	Oryza glaberrima	99.18	7.00e-147	513.00
IUUC-Oin-079818	Oryza indica	99.36	4.00e-116	410.00
IUUC-Ome-081313	Oryza meridionalis	98.91	4.00e-147	513.00
IUUC-Oni-082747	Oryza nivara	98.91	2.00e-147	515.00
IUUC-Opu-084021	Oryza punctata	94.34	1.00e-159	555.00
IUUC-Oru-084445	Oryza rufipogon	98.91	2.00e-145	509.00
IUUC-Osa-085410	Oryza sativa	99.18	8.00e-148	516.00
IUUC-Pop-099467	Populus trichocarpa	39.64	2.00e-52	199.00
IUUC-Ppe-101245	Prunus persica	40.23	3.00e-56	212.00
IUUC-Ptt-103922	Puccinia triticina	35.29	1.00e-08	53.10
IUUC-Smo-109005	Selaginella moellendorffii	37.04	4.00e-35	142.00
IUUC-Sit-109782	Setaria italica	79.58	2.00e-144	505.00
IUUC-Sbi-113814	Sorghum bicolor	80.50	9.00e-126	442.00
IUUC-Tca-121304	Theobroma cacao	42.44	2.00e-51	196.00
IUUC-Tae-123306	Triticum aestivum	66.87	4.00e-149	520.00
IUUC-Vvi-131041	Vitis vinifera	41.57	2.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence