iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135312

Ensembl Protein ID

Zm00001d041418_T001

UniProt Accession

B4FD48; B4FD48_MAIZE

Genbank Protein ID

ACF80041.1; AIB05114.1; ONM32958.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

BT035036; KJ727623; CM007649

Gene Name

AUX35; ZEAMMB73_Zm00001d041418

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d041418	Zm00001d041418_T001	Zm00001d041418_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	5.20e-16	60.6	133	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt..lt........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           ++vkvs++g+++++++dl+ + ++++L++a+++  l+        +++ s++a++YeD+dGDl+ l++D+++ +++s       ++rl+i
   Q: 133  LFVKVSMDGAPYLRKVDLKMYKGYRELREALEAmfLCfsgaadapAVNPSDFAVTYEDKDGDLM-LVGDVPFGMFIS------TCKRLRI 215
           68*******************************764488899998999****************.************......9****** PP
   S: 82   qk 83
           +k
   Q: 216  MK 217
           98 PP

Organism

Zea mays

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEVAAASAAS YGFKADDDVD SLRATELRLG LPGTEEKEEA EEPQHKAAPP PPSTPRGKKR 60
DVVASSGPED APKKRDCETD ADADAAPPPA AKAQLVGWPP VRSYRKSCFQ QQAAAKNKPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCGCCAA GGGCACCACC AGCAAGGACC AAGACAGAGC ACAGCGCAGC TCGTCGGCCT 60
CTCGACGCCG GTTGCTGCAA CCACCGCCTT TATTGCCCAC GCGGGCCGTG CGGAAGAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

zma:100192924

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014020	Brachypodium distachyon	60.45	2.00e-58	217.00
IUUC-Hvu-047853	Hordeum vulgare	58.58	1.00e-59	221.00
IUUC-Mac-065389	Musa acuminata	52.36	3.00e-47	180.00
IUUC-Nle-069356	Nomascus leucogenys	35.94	6.20e-01	28.10
IUUC-Oba-075141	Oryza barthii	61.36	8.00e-59	219.00
IUUC-Ogu-078093	Oryza glumaepatula	61.99	3.00e-59	220.00
IUUC-Oin-079780	Oryza indica	62.44	8.00e-57	212.00
IUUC-Oni-083078	Oryza nivara	62.44	8.00e-57	212.00
IUUC-Oru-084991	Oryza rufipogon	62.44	8.00e-57	212.00
IUUC-Osa-085321	Oryza sativa	62.44	8.00e-57	212.00
IUUC-Sja-107728	Schizosaccharomyces japonicus	34.09	1.00e+00	28.50
IUUC-Sit-109841	Setaria italica	68.49	4.00e-73	266.00
IUUC-Sbi-114296	Sorghum bicolor	68.24	1.00e-70	258.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence