iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091103

UUCD1 version

UUC-PaT-00495

Ensembl Protein ID

ENSPTRP00000025139.3

UniProt Accession

H2QM03; H2QM03_PANTR

Genbank Protein ID

JAA20029.1; JAA36584.1

Protein Name

RAD18 homolog

Genbank Nucleotide ID

AACZ03027089; GABE01008155

Gene Name

RAD18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000014583.3	ENSPTRT00000027268.3	ENSPTRP00000025139.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	1.80e-07	31.2	201	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 1    llvCPvCqkmvdqtdfeeHlDeCl 24
           ++ CPvC+  ++++++++HlD+Cl
   Q: 201  KVDCPVCGVNIPESHINKHLDSCL 224
           689********************8 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MDSLAEPRWP PGLAVMKTID DLLRCGICFE YFNIAMIIPQ CSHNYCSLCI RKFLSYKTQC 60
PTCCVTVTEP DLKNNRILDE LVKSLNFARN HLLQFALESP PKSPASSSSK NLAVKVYTPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAATTTCGA GTGGTGTTGG CGCGCCGGAG GCTAGTGGGT GGCTGACCCC CAGCATCTTC 60
GGGAGCGACC ATGGACTCCC TGGCCGAGCC TCGGTGGCCT CCGGGCCTGG CAGTCATGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003034--SAP_dom
IPR006642--Znf_Rad18_put
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50800--SAP
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02037--SAP

SMART

SM00184--RING
SM00513--SAP
SM00734--ZnF_Rad18

Gene Ontology

GO:0005813--C:centrosome
GO:0016604--C:nuclear body
GO:0042405--C:nuclear inclusion body
GO:0005634--C:nucleus
GO:0097505--C:Rad6-Rad18 complex
GO:0005657--C:replication fork
GO:0035861--C:site of double-strand break
GO:0043142--F:single-stranded DNA-dependent ATPase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0000403--F:Y-form DNA binding
GO:0008270--F:zinc ion binding
GO:0060548--P:negative regulation of cell death
GO:0051984--P:positive regulation of chromosome segregation
GO:0006301--P:postreplication repair
GO:0051865--P:protein autoubiquitination
GO:0006513--P:protein monoubiquitination
GO:0009411--P:response to UV

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002086	Ailuropoda melanoleuca	73.16	0.00e+00	708.00
IUUC-Apl-003657	Anas platyrhynchos	59.20	1.00e-104	373.00
IUUC-Aca-005369	Anolis carolinensis	72.54	4.00e-59	219.00
IUUC-Ago-007876	Ashbya gossypii	32.91	1.00e-09	57.80
IUUC-Acl-008246	Aspergillus clavatus	27.97	1.00e-28	120.00
IUUC-Afl-008666	Aspergillus flavus	30.81	3.00e-15	76.30
IUUC-Afu-009052	Aspergillus fumigatus	27.84	4.00e-27	115.00
IUUC-Ani-009488	Aspergillus nidulans	26.87	3.00e-32	132.00
IUUC-Ang-009681	Aspergillus niger	23.77	2.00e-27	116.00
IUUC-Aor-010037	Aspergillus oryzae	27.50	1.00e-26	114.00
IUUC-Ate-010516	Aspergillus terreus	36.90	1.00e-12	66.60
IUUC-Ame-010630	Astyanax mexicanus	42.96	2.00e-75	276.00
IUUC-Bgr-012178	Blumeria graminis	30.29	2.00e-17	83.20
IUUC-Bta-012976	Bos taurus	77.02	2.00e-173	602.00
IUUC-Bci-013680	Botrytis cinerea	30.23	9.00e-16	78.20
IUUC-Cja-019453	Callithrix jacchus	91.60	0.00e+00	827.00
IUUC-Cfa-020856	Canis familiaris	82.74	0.00e+00	712.00
IUUC-Cpo-021950	Cavia porcellus	78.31	0.00e+00	682.00
IUUC-Csa-023997	Chlorocebus sabaeus	94.46	0.00e+00	841.00
IUUC-Cho-024771	Choloepus hoffmanni	81.34	4.00e-93	335.00
IUUC-Cgl-026668	Colletotrichum gloeosporioides	27.53	8.00e-17	81.60
IUUC-Cme-027202	Cyanidioschyzon merolae	32.94	2.00e-12	67.00
IUUC-Dre-028479	Danio rerio	46.41	2.00e-70	259.00
IUUC-Dno-028943	Dasypus novemcinctus	80.88	0.00e+00	685.00
IUUC-Dor-031046	Dipodomys ordii	70.27	1.00e-142	499.00
IUUC-Dse-031235	Dothistroma septosporum	26.73	8.00e-14	71.60
IUUC-Ete-032503	Echinops telfairi	67.95	1.00e-137	482.00
IUUC-Eca-033725	Equus caballus	86.25	0.00e+00	736.00
IUUC-Eeu-034573	Erinaceus europaeus	71.74	1.00e-118	419.00
IUUC-Fca-036495	Felis catus	74.41	0.00e+00	642.00
IUUC-Fal-036791	Ficedula albicollis	50.99	1.00e-93	337.00
IUUC-Fox-037868	Fusarium oxysporum	35.71	2.00e-12	67.00
IUUC-Fso-038144	Fusarium solani	31.55	2.00e-16	80.10
IUUC-Gmo-039152	Gadus morhua	45.70	1.00e-65	243.00
IUUC-Ggr-039737	Gaeumannomyces graminis	29.51	3.00e-15	76.30
IUUC-Gga-040788	Gallus gallus	53.43	8.00e-106	377.00
IUUC-Gac-041993	Gasterosteus aculeatus	44.07	1.00e-76	280.00
IUUC-Ggo-044889	Gorilla gorilla	97.99	0.00e+00	867.00
IUUC-Hsa-045957	Homo sapiens	98.59	0.00e+00	871.00
IUUC-Itr-048998	Ictidomys tridecemlineatus	80.95	0.00e+00	707.00
IUUC-Kpa-049300	Komagataella pastoris	34.74	5.00e-09	55.10
IUUC-Lch-050172	Latimeria chalumnae	53.97	5.00e-70	257.00
IUUC-Loc-052609	Lepisosteus oculatus	50.41	9.00e-85	307.00
IUUC-Laf-053889	Loxodonta africana	71.52	5.00e-158	550.00
IUUC-Mcc-055853	Macaca mulatta	96.17	0.00e+00	843.00
IUUC-Meu-056866	Macropus eugenii	54.39	1.00e-81	296.00
IUUC-Mor-057071	Magnaporthe oryzae	28.73	9.00e-32	130.00
IUUC-Mpo-057628	Magnaporthe poae	26.32	9.00e-15	74.70
IUUC-Mla-058953	Melampsora laricipopulina	24.28	9.00e-18	85.10
IUUC-Mga-059687	Meleagris gallopavo	53.06	2.00e-103	369.00
IUUC-Mvi-060412	Microbotryum violaceum	22.14	3.00e-11	63.50
IUUC-Mmr-061563	Microcebus murinus	84.83	0.00e+00	741.00
IUUC-Mdo-062655	Monodelphis domestica	60.17	2.00e-127	449.00
IUUC-Mmu-063647	Mus musculus	64.42	3.00e-162	564.00
IUUC-Mpu-065778	Mustela putorius furo	83.27	0.00e+00	746.00
IUUC-Mlu-068205	Myotis lucifugus	80.00	0.00e+00	642.00
IUUC-Nfi-068501	Neosartorya fischeri	25.57	5.00e-27	115.00
IUUC-Ncr-068917	Neurospora crassa	26.67	4.00e-17	82.40
IUUC-Nle-068990	Nomascus leucogenys	97.78	0.00e+00	860.00
IUUC-Opr-071146	Ochotona princeps	74.40	4.00e-177	614.00
IUUC-Ont-071835	Oreochromis niloticus	46.15	1.00e-72	266.00
IUUC-Oan-072827	Ornithorhynchus anatinus	40.16	3.00e-44	171.00
IUUC-Ocu-073986	Oryctolagus cuniculus	78.49	0.00e+00	653.00
IUUC-Ola-086997	Oryzias latipes	42.90	5.00e-64	238.00
IUUC-Olu-087771	Ostreococcus lucimarinus	34.12	1.00e-10	60.50
IUUC-Oga-088092	Otolemur garnettii	85.37	0.00e+00	762.00
IUUC-Oar-089651	Ovis aries	81.66	0.00e+00	662.00
IUUC-Pan-092478	Papio anubis	94.46	0.00e+00	842.00
IUUC-Psi-093356	Pelodiscus sinensis	52.58	1.00e-120	426.00
IUUC-Pfo-096663	Poecilia formosa	42.41	2.00e-60	226.00
IUUC-Pab-098515	Pongo abelii	98.38	0.00e+00	865.00
IUUC-Pca-100588	Procavia capensis	63.40	1.00e-129	456.00
IUUC-Pva-102377	Pteropus vampyrus	85.25	0.00e+00	743.00
IUUC-Pgr-103556	Puccinia graminis	23.74	7.00e-16	78.60
IUUC-Pte-104362	Pyrenophora teres	26.91	5.00e-12	65.90
IUUC-Pyt-104823	Pyrenophora triticirepentis	27.60	2.00e-12	66.60
IUUC-Rno-105866	Rattus norvegicus	76.40	3.00e-175	608.00
IUUC-Sce-106454	Saccharomyces cerevisiae	36.00	6.00e-11	62.00
IUUC-Sha-107515	Sarcophilus harrisii	58.27	3.00e-121	427.00
IUUC-Sja-107689	Schizosaccharomyces japonicus	27.39	1.00e-13	70.90
IUUC-Spo-108248	Schizosaccharomyces pombe	42.50	4.00e-14	72.00
IUUC-Ssl-108430	Sclerotinia sclerotiorum	26.22	4.00e-16	79.30
IUUC-Sre-115123	Sporisorium reilianum	24.56	1.00e-12	67.40
IUUC-Ssc-115992	Sus scrofa	80.31	1.00e-152	532.00
IUUC-Tgu-117286	Taeniopygia guttata	53.69	2.00e-99	355.00
IUUC-Tru-117959	Takifugu rubripes	45.28	8.00e-68	250.00
IUUC-Tsy-119286	Tarsius syrichta	62.90	5.00e-150	524.00
IUUC-Tni-120570	Tetraodon nigroviridis	48.31	2.00e-74	272.00
IUUC-Tre-121893	Trichoderma reesei	26.44	2.00e-14	73.20
IUUC-Tvi-122405	Trichoderma virens	24.25	9.00e-26	110.00
IUUC-Tbe-127758	Tupaia belangeri	79.17	3.00e-84	305.00
IUUC-Ttr-128841	Tursiops truncatus	84.24	0.00e+00	720.00
IUUC-Vda-130021	Verticillium dahliae	28.32	3.00e-17	82.00
IUUC-Vpa-130169	Vicugna pacos	76.58	8.00e-155	540.00
IUUC-Xtr-132308	Xenopus tropicalis	51.47	7.00e-101	360.00
IUUC-Xma-133868	Xiphophorus maculatus	41.46	4.00e-63	235.00
IUUC-Yli-134474	Yarrowia lipolytica	32.52	6.00e-16	78.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence