iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-089075

Ensembl Protein ID

ENSOGAP00000006884.2

UniProt Accession

H0WWU9; H0WWU9_OTOGA

Genbank Protein ID

ENSOGAP00000006884

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03140482

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000007693.2	ENSOGAT00000007698.2	ENSOGAP00000006884.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	4.60e-21	74.3	179	218
ULD/UDP/UBQ/UBQ_PIM	2.70e-26	91.3	20	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 179  EYETMLTEIMSMGYEREQVVAALRASYNNPHRAVEYLLTG 218
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++d+tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 20   VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKAK 97
           68*************************************************************************987 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

VACCVRILGQ PRRSGPTMAV TITLKTLQQQ TFKIRMEPDE TVKVLKEKIE AEKGRDAFPV 60
AGQKLIYAGK ILSDDVPIRD YRIDEKNFVV VMVTKAKAGQ GTSAPLEASP TAASETSTTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGTGAGTT GCATGTTGTG TGAGGATCTT GGGGCAGCCG CGTCGCTCGG GCCCCACCAT 60
GGCCGTCACC ATCACGCTCA AAACGCTGCA GCAGCAGACC TTCAAGATCC GCATGGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	90.26	7.00e-150	523.00
IUUC-Atr-002756	Amborella trichopoda	34.79	4.00e-49	188.00
IUUC-Aca-004704	Anolis carolinensis	79.27	6.00e-113	400.00
IUUC-Ago-007830	Ashbya gossypii	27.59	1.00e-15	77.40
IUUC-Acl-008212	Aspergillus clavatus	35.77	1.00e-24	107.00
IUUC-Afl-008605	Aspergillus flavus	34.88	1.00e-24	107.00
IUUC-Ani-009460	Aspergillus nidulans	38.80	1.00e-29	124.00
IUUC-Aor-010032	Aspergillus oryzae	34.88	2.00e-24	106.00
IUUC-Bgr-012056	Blumeria graminis	35.87	7.00e-37	147.00
IUUC-Bta-012377	Bos taurus	95.03	4.00e-149	520.00
IUUC-Bci-013933	Botrytis cinerea	35.91	5.00e-21	95.10
IUUC-Cel-018364	Caenorhabditis elegans	30.22	1.00e-26	113.00
IUUC-Cja-018946	Callithrix jacchus	95.26	3.00e-153	534.00
IUUC-Cfa-020577	Canis familiaris	96.41	1.00e-155	542.00
IUUC-Cpo-021850	Cavia porcellus	91.03	1.00e-172	598.00
IUUC-Csa-023183	Chlorocebus sabaeus	96.69	6.00e-153	533.00
IUUC-Cme-027260	Cyanidioschyzon merolae	27.38	5.00e-25	108.00
IUUC-Dre-027581	Danio rerio	51.36	3.00e-72	265.00
IUUC-Dno-030017	Dasypus novemcinctus	92.35	2.00e-131	461.00
IUUC-Dor-030358	Dipodomys ordii	84.34	1.00e-125	442.00
IUUC-Dme-032027	Drosophila melanogaster	39.38	4.00e-62	231.00
IUUC-Eca-033599	Equus caballus	92.33	3.00e-136	477.00
IUUC-Fca-036051	Felis catus	95.58	2.00e-153	535.00
IUUC-Gga-040133	Gallus gallus	86.92	1.00e-74	273.00
IUUC-Gac-042298	Gasterosteus aculeatus	59.21	2.00e-84	305.00
IUUC-Ggo-045084	Gorilla gorilla	96.32	3.00e-162	564.00
IUUC-Hsa-046614	Homo sapiens	96.97	1.00e-153	536.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	95.00	9.00e-178	615.00
IUUC-Lch-050563	Latimeria chalumnae	62.66	1.00e-103	369.00
IUUC-Laf-054589	Loxodonta africana	96.42	4.00e-146	510.00
IUUC-Mcc-055860	Macaca mulatta	96.69	6.00e-153	533.00
IUUC-Meu-056459	Macropus eugenii	93.02	3.00e-102	365.00
IUUC-Mmr-060819	Microcebus murinus	96.96	3.00e-167	580.00
IUUC-Mdo-062742	Monodelphis domestica	84.37	3.00e-146	510.00
IUUC-Mmu-063929	Mus musculus	93.66	6.00e-159	553.00
IUUC-Mac-065180	Musa acuminata	33.93	4.00e-44	172.00
IUUC-Mpu-066684	Mustela putorius furo	96.14	3.00e-155	541.00
IUUC-Mlu-067787	Myotis lucifugus	93.94	4.00e-150	523.00
IUUC-Nle-069846	Nomascus leucogenys	85.79	9.00e-134	469.00
IUUC-Ont-072484	Oreochromis niloticus	53.40	6.00e-92	330.00
IUUC-Oan-073572	Ornithorhynchus anatinus	79.56	3.00e-133	468.00
IUUC-Ocu-074968	Oryctolagus cuniculus	94.80	4.00e-106	379.00
IUUC-Oba-074972	Oryza barthii	34.83	1.00e-46	179.00
IUUC-Ogl-077152	Oryza glaberrima	31.48	5.00e-41	161.00
IUUC-Olo-080559	Oryza longistaminata	34.43	2.00e-46	179.00
IUUC-Oni-082812	Oryza nivara	34.83	2.00e-46	179.00
IUUC-Oar-090387	Ovis aries	93.42	1.00e-150	525.00
IUUC-Ptr-090912	Pan troglodytes	93.39	7.00e-143	499.00
IUUC-Pan-092140	Papio anubis	96.05	9.00e-162	562.00
IUUC-Psi-093347	Pelodiscus sinensis	67.39	2.00e-69	255.00
IUUC-Pno-095064	Phaeosphaeria nodorum	37.31	2.00e-18	86.70
IUUC-Pfo-096607	Poecilia formosa	62.92	4.00e-95	341.00
IUUC-Pab-097738	Pongo abelii	93.66	2.00e-147	514.00
IUUC-Pca-100348	Procavia capensis	93.41	2.00e-144	505.00
IUUC-Ppe-101522	Prunus persica	34.09	3.00e-49	188.00
IUUC-Pva-102412	Pteropus vampyrus	95.87	2.00e-153	535.00
IUUC-Pgr-103641	Puccinia graminis	36.54	9.00e-24	104.00
IUUC-Rno-105569	Rattus norvegicus	94.20	4.00e-151	527.00
IUUC-Sha-106918	Sarcophilus harrisii	85.96	6.00e-132	463.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	35.04	1.00e-44	173.00
IUUC-Smo-109129	Selaginella moellendorffii	32.61	1.00e-44	173.00
IUUC-Sit-109813	Setaria italica	35.43	4.00e-46	178.00
IUUC-Sbi-114459	Sorghum bicolor	32.03	3.00e-45	175.00
IUUC-Ssc-115460	Sus scrofa	95.00	1.00e-162	565.00
IUUC-Tsy-119385	Tarsius syrichta	79.78	6.00e-71	259.00
IUUC-Tni-120493	Tetraodon nigroviridis	69.77	6.00e-71	261.00
IUUC-Tca-121594	Theobroma cacao	35.52	2.00e-50	193.00
IUUC-Tbe-127603	Tupaia belangeri	84.67	5.00e-55	208.00
IUUC-Ttr-129232	Tursiops truncatus	85.40	6.00e-142	496.00
IUUC-Vda-129946	Verticillium dahliae	32.71	1.00e-20	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence