iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090912

Ensembl Protein ID

ENSPTRP00000018011.3

UniProt Accession

H2QFH9; H2QFH9_PANTR

Genbank Protein ID

ENSPTRP00000018011

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03118301

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000010552.3	ENSPTRT00000019458.3	ENSPTRP00000018011.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.10e-21	73.9	149	188
ULD/UDP/UBQ/UBQ_PIM	4.30e-17	61.8	11	67

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 149  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 188
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 22   tveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
            v+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 11   QVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTK 67
           5999**************************************************987 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAVTITLKTL QVKVLKEKIE AEKGRDAFPV AGQKLIYAGK ILSDDVPIRD YRIDEKNFVV 60
VMVTKTKAGQ GTSAPPEASP TAAPESSTSF PPAPTSGMSH PPPAAREDKS PSEESAPTTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTCA CCATCACGCT CAAAACGCTG CAGCNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.11	2.00e-32	133.00
IUUC-Aml-001515	Ailuropoda melanoleuca	97.06	1.00e-142	499.00
IUUC-Atr-002756	Amborella trichopoda	34.28	4.00e-44	171.00
IUUC-Aca-004704	Anolis carolinensis	78.45	4.00e-107	380.00
IUUC-Ani-009460	Aspergillus nidulans	38.80	3.00e-29	122.00
IUUC-Bgr-012056	Blumeria graminis	34.43	2.00e-17	83.20
IUUC-Bta-012377	Bos taurus	92.56	1.00e-137	482.00
IUUC-Bdi-014718	Brachypodium distachyon	30.79	8.00e-37	147.00
IUUC-Cel-018364	Caenorhabditis elegans	31.44	4.00e-23	101.00
IUUC-Cja-018946	Callithrix jacchus	93.11	7.00e-144	503.00
IUUC-Cfa-020577	Canis familiaris	93.66	3.00e-144	504.00
IUUC-Cpo-021850	Cavia porcellus	89.53	5.00e-156	543.00
IUUC-Csa-023183	Chlorocebus sabaeus	96.14	4.00e-146	510.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	33.15	3.00e-16	79.00
IUUC-Dno-030017	Dasypus novemcinctus	95.32	8.00e-130	456.00
IUUC-Dor-030358	Dipodomys ordii	81.04	1.00e-115	409.00
IUUC-Eca-033599	Equus caballus	93.51	2.00e-138	484.00
IUUC-Fca-036051	Felis catus	92.84	4.00e-142	497.00
IUUC-Fso-038107	Fusarium solani	49.50	1.00e-15	77.40
IUUC-Gmo-038528	Gadus morhua	58.43	1.00e-86	313.00
IUUC-Gga-040133	Gallus gallus	86.98	6.00e-75	274.00
IUUC-Gma-044077	Glycine max	34.59	9.00e-40	157.00
IUUC-Ggo-045084	Gorilla gorilla	96.42	5.00e-146	510.00
IUUC-Hsa-046614	Homo sapiens	96.42	8.00e-147	513.00
IUUC-Hvu-047832	Hordeum vulgare	39.34	3.00e-32	132.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	93.94	2.00e-164	571.00
IUUC-Lch-050563	Latimeria chalumnae	60.55	2.00e-96	345.00
IUUC-Laf-054589	Loxodonta africana	93.39	4.00e-136	477.00
IUUC-Mcc-055860	Macaca mulatta	96.14	4.00e-146	510.00
IUUC-Meu-056459	Macropus eugenii	93.95	5.00e-105	374.00
IUUC-Mmr-060819	Microcebus murinus	93.66	9.00e-157	546.00
IUUC-Mdo-062742	Monodelphis domestica	85.42	4.00e-139	487.00
IUUC-Mmu-063929	Mus musculus	91.18	2.00e-153	535.00
IUUC-Mpu-066684	Mustela putorius furo	93.66	5.00e-147	513.00
IUUC-Mlu-067787	Myotis lucifugus	91.46	3.00e-141	494.00
IUUC-Nle-069846	Nomascus leucogenys	84.74	2.00e-125	441.00
IUUC-Ont-072271	Oreochromis niloticus	56.81	6.00e-87	314.00
IUUC-Oan-073572	Ornithorhynchus anatinus	76.86	2.00e-121	428.00
IUUC-Ocu-074968	Oryctolagus cuniculus	91.24	2.00e-95	343.00
IUUC-Oba-075392	Oryza barthii	38.71	4.00e-32	132.00
IUUC-Obr-076660	Oryza brachyantha	33.50	3.00e-39	155.00
IUUC-Ogu-078883	Oryza glumaepatula	38.71	4.00e-32	132.00
IUUC-Oin-079817	Oryza indica	38.71	6.00e-32	131.00
IUUC-Olo-080929	Oryza longistaminata	38.71	3.00e-32	132.00
IUUC-Ome-081866	Oryza meridionalis	38.71	3.00e-32	132.00
IUUC-Oni-083092	Oryza nivara	38.71	6.00e-32	131.00
IUUC-Opu-083756	Oryza punctata	39.44	6.00e-34	137.00
IUUC-Oru-084816	Oryza rufipogon	38.71	6.00e-32	131.00
IUUC-Osa-086112	Oryza sativa	38.71	6.00e-32	131.00
IUUC-Oga-089075	Otolemur garnettii	93.39	4.00e-139	487.00
IUUC-Oar-090387	Ovis aries	92.29	5.00e-135	473.00
IUUC-Pan-092140	Papio anubis	96.14	2.00e-145	508.00
IUUC-Psi-093347	Pelodiscus sinensis	66.87	1.00e-67	249.00
IUUC-Pfo-096607	Poecilia formosa	64.83	1.00e-93	336.00
IUUC-Pab-097738	Pongo abelii	99.71	7.00e-154	536.00
IUUC-Pca-100348	Procavia capensis	90.93	3.00e-136	477.00
IUUC-Ppe-101522	Prunus persica	33.86	5.00e-44	171.00
IUUC-Pva-102412	Pteropus vampyrus	93.66	2.00e-146	511.00
IUUC-Pgr-103618	Puccinia graminis	37.31	6.00e-25	108.00
IUUC-Rno-105569	Rattus norvegicus	91.46	1.00e-139	489.00
IUUC-Sha-106918	Sarcophilus harrisii	86.34	3.00e-131	461.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.42	3.00e-33	135.00
IUUC-Smo-109129	Selaginella moellendorffii	38.65	4.00e-32	132.00
IUUC-Sit-109813	Setaria italica	35.71	6.00e-41	160.00
IUUC-Sbi-114459	Sorghum bicolor	30.73	1.00e-38	153.00
IUUC-Ssc-115460	Sus scrofa	93.11	7.00e-144	503.00
IUUC-Tsy-119385	Tarsius syrichta	76.84	2.00e-61	228.00
IUUC-Tni-120493	Tetraodon nigroviridis	60.63	2.00e-92	332.00
IUUC-Tre-121911	Trichoderma reesei	36.39	2.00e-27	115.00
IUUC-Tur-126610	Triticum urartu	38.11	9.00e-33	135.00
IUUC-Tbe-127603	Tupaia belangeri	84.67	3.00e-55	208.00
IUUC-Ttr-129232	Tursiops truncatus	83.20	6.00e-134	469.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence