iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108040

UUCD1 version

UUC-ScP-00047

Ensembl Protein ID

SPBC1703.06.1:pep

UniProt Accession

Q9P7W4; POF10_SCHPO

Genbank Protein ID

BAB55636.1; CAB66450.1

Protein Name

F-box/WD repeat-containing protein pof10; Skp1-binding protein 2

Genbank Nucleotide ID

AB061725; CU329671

Gene Name

pof10; sbp2; SPBC1703.06

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPBC1703.06	SPBC1703.06.1	SPBC1703.06.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	11820777
E3 adaptor/Cullin RING/DCX/DWD	WD_repeat	11820777

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-13	47.4	216	260
E3 adaptor/Cullin RING/SCF/F-box	2.90e-06	25.5	28	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.f.....sdtl..lvsGsdDgtikvWDlrtgvllks 38
           H+dsvtc++ +     +++   +v+GsdDg++++WD++tgv+l+s
   Q: 216  HADSVTCIDaLtgdlpPTGEigMVTGSDDGSVHCWDVKTGVSLQS 260
           9*******747888764433467******************9986 PP

E3 adaptor/Cullin RING/SCF/F-box

   S: 100  aglldrlpeeilveilklldkeellraarvcrrwqelasqkalwktv 146
           + ++ +lp+eil+ i+++ld+++ll+a+++c+ w++l s++  w+t+
   Q: 28   NRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRTA 74
           567789*****************************999999999986 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with skp1.

Protein Sequence
(Fasta)

MKSEPTSLDF TSSNLRRMNR DHSSNNTNRT VLNLPKEILI IIFSFLDPRS LLSAQCTCKY 60
WKKLLSDDLS WRTAFFHHFA GDQSQIFSPL GNGTWRQEYL LRSTITRAYE KGKGQTVQYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAGTTCCA CTTTATATAC TAAGGCAAAA CGCCAAGACC AATGAAATCG GAACCAACAT 60
CTTTGGATTT TACATCCTCA AACCTAAGGA GAATGAATCG GGATCATTCT TCAAATAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR003903--UIM_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50330--UIM
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0000151--C:ubiquitin ligase complex
GO:0030674--F:protein binding, bridging
GO:0070647--P:protein modification by small protein conjugation or removal

KEGG

spo:SPBC1703.06

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002989	Amborella trichopoda	34.33	6.00e-09	51.20
IUUC-Afl-008498	Aspergillus flavus	23.28	4.00e-07	48.90
IUUC-Ani-009180	Aspergillus nidulans	24.83	2.00e-09	56.60
IUUC-Ang-009572	Aspergillus niger	25.00	1.00e-07	50.10
IUUC-Aor-009996	Aspergillus oryzae	23.28	3.00e-07	48.90
IUUC-Ate-010301	Aspergillus terreus	25.72	3.00e-10	58.90
IUUC-Bgr-012114	Blumeria graminis	23.93	7.00e-11	61.20
IUUC-Bci-013912	Botrytis cinerea	23.04	3.00e-05	42.40
IUUC-Cre-022985	Chlamydomonas reinhardtii	30.99	5.00e-07	45.80
IUUC-Cgl-026639	Colletotrichum gloeosporioides	23.89	6.00e-10	58.20
IUUC-Dse-031356	Dothistroma septosporum	23.29	2.00e-08	53.10
IUUC-Fox-038038	Fusarium oxysporum	23.49	6.00e-12	64.70
IUUC-Fso-038457	Fusarium solani	25.62	1.00e-12	67.00
IUUC-Ggr-039798	Gaeumannomyces graminis	24.70	8.00e-12	64.70
IUUC-Kpa-049204	Komagataella pastoris	21.50	1.00e-24	106.00
IUUC-Lpe-051216	Leersia perrieri	35.14	8.00e-11	57.40
IUUC-Lma-053074	Leptosphaeria maculans	26.20	1.00e-09	57.40
IUUC-Mor-057046	Magnaporthe oryzae	23.81	2.00e-06	46.60
IUUC-Mpo-057339	Magnaporthe poae	23.85	2.00e-10	59.70
IUUC-Mtr-058192	Medicago truncatula	37.31	2.00e-11	59.70
IUUC-Mla-059163	Melampsora laricipopulina	24.10	8.00e-11	58.50
IUUC-Mvi-060236	Microbotryum violaceum	23.04	5.00e-13	68.60
IUUC-Ncr-068921	Neurospora crassa	28.01	4.00e-14	72.00
IUUC-Obr-076604	Oryza brachyantha	35.53	3.00e-10	55.80
IUUC-Ogl-077760	Oryza glaberrima	35.14	4.00e-11	58.50
IUUC-Ogu-078908	Oryza glumaepatula	35.14	4.00e-11	58.50
IUUC-Oin-079955	Oryza indica	35.14	4.00e-11	58.50
IUUC-Ome-081325	Oryza meridionalis	36.49	1.00e-11	60.50
IUUC-Oru-084201	Oryza rufipogon	35.14	5.00e-11	58.50
IUUC-Osa-086284	Oryza sativa	35.14	9.00e-12	58.90
IUUC-Pno-094906	Phaeosphaeria nodorum	24.89	7.00e-10	58.90
IUUC-Pte-104078	Pyrenophora teres	26.29	1.00e-06	48.10
IUUC-Pyt-104800	Pyrenophora triticirepentis	20.57	3.00e-04	38.90
IUUC-Sja-107879	Schizosaccharomyces japonicus	46.85	3.00e-158	549.00
IUUC-Ssl-108510	Sclerotinia sclerotiorum	25.38	2.00e-07	49.30
IUUC-Sit-109751	Setaria italica	33.78	4.00e-11	58.50
IUUC-Sly-111663	Solanum lycopersicum	32.00	2.00e-10	55.80
IUUC-Stu-111936	Solanum tuberosum	34.67	1.00e-11	60.50
IUUC-Sbi-114321	Sorghum bicolor	35.44	5.00e-11	58.50
IUUC-Sre-115164	Sporisorium reilianum	30.13	2.00e-20	93.20
IUUC-Tca-121034	Theobroma cacao	36.23	1.00e-09	53.50
IUUC-Tre-122121	Trichoderma reesei	22.85	8.00e-09	54.30
IUUC-Tvi-122403	Trichoderma virens	24.67	7.00e-12	64.30
IUUC-Tme-126943	Tuber melanosporum	28.70	8.00e-11	61.20
IUUC-Uma-129641	Ustilago maydis	29.85	9.00e-18	84.30
IUUC-Vda-129822	Verticillium dahliae	27.61	2.00e-12	66.60
IUUC-Yli-134540	Yarrowia lipolytica	20.80	5.00e-09	54.30
IUUC-Zma-135261	Zea mays	32.43	6.00e-11	57.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence