iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114693

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G322300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g035270	Sb04g035270.1	Sb04g035270.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	23.82	6.00e-35	147.00	IUUC-Hsa-046958

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MVEEQMEEAS TAPAAATPFQ LQFDKPIPFQ IKLAEWNPEK DLLAMVTDDS KVILHRFNWQ 60
RLWTISPGKC ITSICWSPDG KIIALGTEDG LVLLHDVENG KMLRTTKSHD VAIVCLNWAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGAGG AGCAGATGGA GGAGGCATCC ACGGCCCCGG CGGCGGCCAC GCCGTTCCAG 60
CTCCAGTTCG ACAAGCCCAT CCCGTTCCAG GTCTAGTCTG CGCCCTCCTC CCCCGCCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024789--APC4
IPR024790--APC4_long_dom
IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2

Pfam

PF12896--ANAPC4
PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005680--C:anaphase-promoting complex
GO:0016020--C:membrane
GO:0031145--P:anaphase-promoting complex-dependent catabolic process
GO:0051301--P:cell division
GO:0000086--P:G2/M transition of mitotic cell cycle
GO:0009933--P:meristem structural organization
GO:0009934--P:regulation of meristem structural organization
GO:0030071--P:regulation of mitotic metaphase/anaphase transition

KEGG

sbi:SORBI_04g035180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002338	Ailuropoda melanoleuca	23.83	3.00e-36	146.00
IUUC-Atr-003115	Amborella trichopoda	50.39	0.00e+00	746.00
IUUC-Apl-003682	Anas platyrhynchos	24.76	9.00e-31	127.00
IUUC-Aca-005052	Anolis carolinensis	24.21	6.00e-37	148.00
IUUC-Ath-007407	Arabidopsis thaliana	51.00	0.00e+00	727.00
IUUC-Acl-008322	Aspergillus clavatus	21.36	3.00e-12	66.60
IUUC-Afl-008731	Aspergillus flavus	21.36	6.00e-17	82.40
IUUC-Afu-008986	Aspergillus fumigatus	21.89	6.00e-15	75.50
IUUC-Ani-009236	Aspergillus nidulans	23.17	6.00e-17	82.00
IUUC-Ang-009689	Aspergillus niger	22.66	1.00e-09	57.80
IUUC-Ate-010504	Aspergillus terreus	21.86	3.00e-11	63.20
IUUC-Ame-011676	Astyanax mexicanus	26.22	2.00e-43	170.00
IUUC-Bgr-012272	Blumeria graminis	20.17	2.00e-13	70.50
IUUC-Bta-013421	Bos taurus	23.44	6.00e-36	145.00
IUUC-Bdi-014507	Brachypodium distachyon	79.34	0.00e+00	1197.00
IUUC-Bol-015675	Brassica oleracea	51.26	0.00e+00	747.00
IUUC-Bra-017735	Brassica rapa	51.13	0.00e+00	747.00
IUUC-Cja-019695	Callithrix jacchus	23.66	5.00e-35	142.00
IUUC-Cfa-020688	Canis familiaris	23.83	3.00e-36	146.00
IUUC-Cpo-022263	Cavia porcellus	23.79	3.00e-34	139.00
IUUC-Csa-023068	Chlorocebus sabaeus	23.82	2.00e-36	147.00
IUUC-Cho-024289	Choloepus hoffmanni	23.16	2.00e-15	77.40
IUUC-Dre-028148	Danio rerio	25.00	1.00e-34	140.00
IUUC-Dno-028901	Dasypus novemcinctus	28.21	4.00e-15	75.10
IUUC-Dor-030642	Dipodomys ordii	21.21	2.00e-16	80.10
IUUC-Eca-033983	Equus caballus	23.61	4.00e-36	145.00
IUUC-Eeu-035203	Erinaceus europaeus	22.78	6.00e-22	98.60
IUUC-Fca-036269	Felis catus	23.62	1.00e-35	144.00
IUUC-Fal-036650	Ficedula albicollis	25.45	6.00e-40	158.00
IUUC-Fso-038390	Fusarium solani	22.29	7.00e-14	71.60
IUUC-Gmo-039161	Gadus morhua	24.77	2.00e-34	139.00
IUUC-Gga-041031	Gallus gallus	28.79	8.00e-20	89.40
IUUC-Gac-042424	Gasterosteus aculeatus	23.41	3.00e-34	139.00
IUUC-Gma-043402	Glycine max	50.86	0.00e+00	734.00
IUUC-Ggo-045199	Gorilla gorilla	23.99	1.00e-36	147.00
IUUC-Hsa-046958	Homo sapiens	23.82	1.00e-36	147.00
IUUC-Itr-049044	Ictidomys tridecemlineatus	24.22	5.00e-37	148.00
IUUC-Kpa-049219	Komagataella pastoris	20.70	4.00e-10	58.90
IUUC-Lpe-050838	Leersia perrieri	74.73	0.00e+00	1093.00
IUUC-Loc-052502	Lepisosteus oculatus	24.44	6.00e-38	151.00
IUUC-Lma-053262	Leptosphaeria maculans	32.61	3.00e-06	46.60
IUUC-Laf-054361	Loxodonta africana	24.04	9.00e-37	147.00
IUUC-Mcc-054893	Macaca mulatta	23.82	2.00e-36	147.00
IUUC-Mor-056950	Magnaporthe oryzae	22.86	8.00e-18	85.10
IUUC-Mpo-057479	Magnaporthe poae	22.73	3.00e-16	80.10
IUUC-Mtr-058751	Medicago truncatula	50.60	0.00e+00	736.00
IUUC-Mga-059591	Meleagris gallopavo	24.76	5.00e-35	142.00
IUUC-Mvi-060263	Microbotryum violaceum	24.50	7.00e-09	55.80
IUUC-Mmr-060603	Microcebus murinus	23.60	1.00e-36	147.00
IUUC-Mdo-062137	Monodelphis domestica	25.23	1.00e-35	144.00
IUUC-Mmu-064358	Mus musculus	23.77	4.00e-34	139.00
IUUC-Mac-064679	Musa acuminata	55.58	8.00e-148	516.00
IUUC-Mpu-065751	Mustela putorius furo	23.44	1.00e-35	144.00
IUUC-Mlu-067502	Myotis lucifugus	23.77	1.00e-35	144.00
IUUC-Nfi-068257	Neosartorya fischeri	22.90	3.00e-18	86.30
IUUC-Ncr-068721	Neurospora crassa	38.75	3.00e-07	49.70
IUUC-Nle-069134	Nomascus leucogenys	23.82	1.00e-36	147.00
IUUC-Opr-071225	Ochotona princeps	22.42	1.00e-30	127.00
IUUC-Ont-072232	Oreochromis niloticus	23.70	4.00e-32	132.00
IUUC-Oan-073358	Ornithorhynchus anatinus	25.17	3.00e-35	142.00
IUUC-Oba-075232	Oryza barthii	81.01	0.00e+00	1125.00
IUUC-Oin-079188	Oryza indica	73.59	0.00e+00	1062.00
IUUC-Opu-083725	Oryza punctata	78.01	0.00e+00	1147.00
IUUC-Osa-086145	Oryza sativa	92.86	2.00e-62	230.00
IUUC-Ola-086672	Oryzias latipes	24.10	9.00e-38	151.00
IUUC-Oga-088691	Otolemur garnettii	23.99	1.00e-36	147.00
IUUC-Oar-089607	Ovis aries	23.83	2.00e-36	147.00
IUUC-Ptr-090893	Pan troglodytes	23.82	2.00e-36	146.00
IUUC-Pan-092793	Papio anubis	23.99	3.00e-36	146.00
IUUC-Psi-093143	Pelodiscus sinensis	23.99	2.00e-31	130.00
IUUC-Pma-094645	Petromyzon marinus	27.84	3.00e-34	139.00
IUUC-Pno-094772	Phaeosphaeria nodorum	23.62	2.00e-06	47.00
IUUC-Ppa-095509	Physcomitrella patens	39.25	1.00e-122	432.00
IUUC-Pfo-096716	Poecilia formosa	25.64	2.00e-43	169.00
IUUC-Pab-098772	Pongo abelii	24.27	9.00e-37	148.00
IUUC-Pop-099247	Populus trichocarpa	51.37	0.00e+00	744.00
IUUC-Pca-101083	Procavia capensis	23.23	3.00e-22	99.80
IUUC-Ppe-101619	Prunus persica	52.65	0.00e+00	701.00
IUUC-Pva-103168	Pteropus vampyrus	23.66	2.00e-36	147.00
IUUC-Rno-105693	Rattus norvegicus	23.77	2.00e-34	140.00
IUUC-Sha-106567	Sarcophilus harrisii	25.00	6.00e-36	145.00
IUUC-Sja-107773	Schizosaccharomyces japonicus	26.53	3.00e-07	49.70
IUUC-Spo-108176	Schizosaccharomyces pombe	21.69	6.00e-17	82.00
IUUC-Ssl-108414	Sclerotinia sclerotiorum	21.24	4.00e-19	89.00
IUUC-Smo-108903	Selaginella moellendorffii	40.62	8.00e-33	133.00
IUUC-Sit-110467	Setaria italica	87.94	0.00e+00	1305.00
IUUC-Sly-111734	Solanum lycopersicum	52.99	0.00e+00	753.00
IUUC-Sar-112993	Sorex araneus	20.13	3.00e-08	52.80
IUUC-Ssc-115237	Sus scrofa	24.05	2.00e-36	146.00
IUUC-Tgu-116897	Taeniopygia guttata	24.77	1.00e-38	154.00
IUUC-Tru-117802	Takifugu rubripes	23.75	1.00e-33	137.00
IUUC-Tsy-119583	Tarsius syrichta	23.00	1.00e-19	91.30
IUUC-Tni-120268	Tetraodon nigroviridis	22.62	4.00e-21	95.50
IUUC-Tca-121296	Theobroma cacao	52.93	0.00e+00	788.00
IUUC-Tae-123786	Triticum aestivum	77.88	0.00e+00	1175.00
IUUC-Tbe-127711	Tupaia belangeri	22.76	2.00e-28	119.00
IUUC-Ttr-128537	Tursiops truncatus	23.28	5.00e-19	89.00
IUUC-Vda-130028	Verticillium dahliae	21.28	4.00e-10	59.30
IUUC-Vpa-130111	Vicugna pacos	20.75	1.00e-08	54.70
IUUC-Vvi-131490	Vitis vinifera	52.12	0.00e+00	780.00
IUUC-Xtr-132380	Xenopus tropicalis	25.45	2.00e-38	153.00
IUUC-Xma-133597	Xiphophorus maculatus	25.64	2.00e-43	170.00
IUUC-Yli-134609	Yarrowia lipolytica	21.92	3.00e-15	76.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence