iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000915

Ensembl Protein ID

EMT05455

UniProt Accession

M8AUU6; M8AUU6_AEGTA

Genbank Protein ID

EMT05455.1

Protein Name

E3 ubiquitin-protein ligase UBR4

Genbank Nucleotide ID

KD586875

Gene Name

F775_05999

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_05999	EMT05455	EMT05455

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	31.66	0.00e+00	974.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MDGSCFDTFH YPFEHLGACL MNLMLSMEQV ESTVVEIAER SLEFCLLYLE KSSYACDDFG 60
LLNEVAFFME SVLLSGSPSK VYSLEPSNIH DVIEQWSSVP VESERMSPQD KYFCYLKGFN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGGAT CCTGCTTTGA TACATTTCAT TACCCTTTTG AGCATCTTGG TGCCTGCCTT 60
ATGAATTTGA TGCTGTCCAG TAAGTTGTGA GTGCTCTTGT AAGTTAGGAG TATGCTGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0436--Ligase
KW-0479--Metal-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR003126--Znf_UBR
IPR000433--Znf_ZZ

PROSITE

PS51157--ZF_UBR
PS01357--ZF_ZZ_1
PS50135--ZF_ZZ_2

Pfam

PF13764--E3_UbLigase_R4
PF00569--ZZ

SMART

SM00396--ZnF_UBR1
SM00291--ZnF_ZZ

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_05999

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001346	Ailuropoda melanoleuca	34.03	0.00e+00	881.00
IUUC-Atr-002587	Amborella trichopoda	56.96	0.00e+00	4190.00
IUUC-Apl-003678	Anas platyrhynchos	33.89	0.00e+00	883.00
IUUC-Aca-004517	Anolis carolinensis	41.92	9.00e-99	353.00
IUUC-Aly-006117	Arabidopsis lyrata	57.27	0.00e+00	5215.00
IUUC-Ath-007289	Arabidopsis thaliana	57.03	0.00e+00	5173.00
IUUC-Ame-011965	Astyanax mexicanus	29.03	2.00e-56	215.00
IUUC-Bta-012498	Bos taurus	32.67	0.00e+00	934.00
IUUC-Bci-013659	Botrytis cinerea	43.10	1.00e-06	48.10
IUUC-Bdi-014555	Brachypodium distachyon	89.65	0.00e+00	8494.00
IUUC-Bol-015522	Brassica oleracea	57.13	0.00e+00	5229.00
IUUC-Bra-017090	Brassica rapa	57.03	0.00e+00	4964.00
IUUC-Cel-018504	Caenorhabditis elegans	27.15	7.00e-56	213.00
IUUC-Cja-018983	Callithrix jacchus	34.16	0.00e+00	886.00
IUUC-Cfa-020612	Canis familiaris	32.82	0.00e+00	944.00
IUUC-Cpo-021700	Cavia porcellus	32.74	0.00e+00	944.00
IUUC-Csa-023771	Chlorocebus sabaeus	34.10	0.00e+00	889.00
IUUC-Cho-024474	Choloepus hoffmanni	34.34	8.00e-126	446.00
IUUC-Cin-025247	Ciona intestinalis	31.04	9.00e-97	347.00
IUUC-Csv-026255	Ciona savignyi	30.53	5.00e-97	348.00
IUUC-Cne-027045	Cryptococcus neoformans	34.78	2.00e-04	41.20
IUUC-Dre-028796	Danio rerio	31.19	0.00e+00	947.00
IUUC-Dno-030056	Dasypus novemcinctus	32.32	0.00e+00	932.00
IUUC-Dor-030711	Dipodomys ordii	33.51	0.00e+00	741.00
IUUC-Dme-032113	Drosophila melanogaster	30.98	0.00e+00	838.00
IUUC-Ete-032334	Echinops telfairi	33.97	0.00e+00	847.00
IUUC-Eca-033327	Equus caballus	32.72	0.00e+00	944.00
IUUC-Eeu-034698	Erinaceus europaeus	38.66	9.00e-57	217.00
IUUC-Fca-035430	Felis catus	32.27	0.00e+00	926.00
IUUC-Fal-037566	Ficedula albicollis	33.94	0.00e+00	887.00
IUUC-Gmo-038674	Gadus morhua	30.66	0.00e+00	919.00
IUUC-Gga-040641	Gallus gallus	33.98	0.00e+00	895.00
IUUC-Gac-041870	Gasterosteus aculeatus	33.04	0.00e+00	957.00
IUUC-Gma-042722	Glycine max	59.87	0.00e+00	5476.00
IUUC-Ggo-045360	Gorilla gorilla	32.87	0.00e+00	948.00
IUUC-Hsa-046955	Homo sapiens	32.87	0.00e+00	948.00
IUUC-Hvu-047255	Hordeum vulgare	97.44	0.00e+00	9354.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	30.15	2.00e-62	234.00
IUUC-Lch-049893	Latimeria chalumnae	33.16	0.00e+00	837.00
IUUC-Lpe-050948	Leersia perrieri	83.84	0.00e+00	7542.00
IUUC-Loc-052019	Lepisosteus oculatus	29.73	0.00e+00	816.00
IUUC-Laf-054238	Loxodonta africana	32.87	0.00e+00	943.00
IUUC-Mcc-054905	Macaca mulatta	33.99	0.00e+00	883.00
IUUC-Meu-056297	Macropus eugenii	32.01	0.00e+00	798.00
IUUC-Mtr-058169	Medicago truncatula	58.55	0.00e+00	5514.00
IUUC-Mga-059621	Meleagris gallopavo	32.79	0.00e+00	956.00
IUUC-Mmr-061395	Microcebus murinus	34.29	0.00e+00	817.00
IUUC-Mdo-063037	Monodelphis domestica	33.75	0.00e+00	889.00
IUUC-Mmu-063200	Mus musculus	32.77	0.00e+00	942.00
IUUC-Mac-065267	Musa acuminata	70.43	0.00e+00	3561.00
IUUC-Mpu-066639	Mustela putorius furo	33.81	0.00e+00	879.00
IUUC-Mlu-067172	Myotis lucifugus	32.84	0.00e+00	945.00
IUUC-Nle-069162	Nomascus leucogenys	33.99	0.00e+00	886.00
IUUC-Opr-070567	Ochotona princeps	37.81	1.00e-121	432.00
IUUC-Ont-072364	Oreochromis niloticus	33.62	0.00e+00	869.00
IUUC-Oan-072804	Ornithorhynchus anatinus	33.98	2.00e-141	496.00
IUUC-Ocu-074637	Oryctolagus cuniculus	32.90	0.00e+00	942.00
IUUC-Oba-075215	Oryza barthii	84.79	0.00e+00	7661.00
IUUC-Obr-076704	Oryza brachyantha	84.20	0.00e+00	8057.00
IUUC-Ogl-077593	Oryza glaberrima	84.52	0.00e+00	6656.00
IUUC-Ogu-078732	Oryza glumaepatula	84.93	0.00e+00	7690.00
IUUC-Oin-079805	Oryza indica	89.95	0.00e+00	2965.00
IUUC-Olo-080261	Oryza longistaminata	85.24	0.00e+00	7702.00
IUUC-Ome-081392	Oryza meridionalis	85.00	0.00e+00	8020.00
IUUC-Oni-082086	Oryza nivara	84.97	0.00e+00	7687.00
IUUC-Opu-083535	Oryza punctata	85.58	0.00e+00	7771.00
IUUC-Oru-084735	Oryza rufipogon	84.91	0.00e+00	7675.00
IUUC-Ola-086799	Oryzias latipes	32.23	0.00e+00	934.00
IUUC-Olu-087777	Ostreococcus lucimarinus	32.52	6.00e-115	410.00
IUUC-Oga-088126	Otolemur garnettii	32.31	1.00e-86	313.00
IUUC-Oar-090428	Ovis aries	32.39	0.00e+00	931.00
IUUC-Ptr-091407	Pan troglodytes	32.87	0.00e+00	948.00
IUUC-Pan-091777	Papio anubis	32.90	0.00e+00	958.00
IUUC-Psi-093587	Pelodiscus sinensis	32.14	0.00e+00	910.00
IUUC-Pma-094248	Petromyzon marinus	36.26	8.00e-11	62.00
IUUC-Ppa-095781	Physcomitrella patens	47.83	0.00e+00	4185.00
IUUC-Pfo-097449	Poecilia formosa	31.99	0.00e+00	880.00
IUUC-Pab-098450	Pongo abelii	32.77	0.00e+00	921.00
IUUC-Pop-100041	Populus trichocarpa	60.03	0.00e+00	5484.00
IUUC-Pca-100663	Procavia capensis	29.87	2.00e-106	382.00
IUUC-Ppe-101386	Prunus persica	60.39	0.00e+00	5594.00
IUUC-Pva-102701	Pteropus vampyrus	31.24	0.00e+00	859.00
IUUC-Rno-105367	Rattus norvegicus	32.79	0.00e+00	944.00
IUUC-Sha-107490	Sarcophilus harrisii	33.87	0.00e+00	888.00
IUUC-Sja-108012	Schizosaccharomyces japonicus	48.28	2.00e-04	39.70
IUUC-Ssl-108622	Sclerotinia sclerotiorum	41.38	1.00e-06	48.10
IUUC-Smo-109103	Selaginella moellendorffii	49.38	0.00e+00	4115.00
IUUC-Sit-110670	Setaria italica	83.38	0.00e+00	7673.00
IUUC-Sly-110952	Solanum lycopersicum	57.66	0.00e+00	5289.00
IUUC-Stu-112624	Solanum tuberosum	69.98	0.00e+00	2036.00
IUUC-Sar-113180	Sorex araneus	30.29	2.00e-132	468.00
IUUC-Sbi-114596	Sorghum bicolor	81.66	0.00e+00	7552.00
IUUC-Ssc-115377	Sus scrofa	34.23	0.00e+00	816.00
IUUC-Tgu-117330	Taeniopygia guttata	34.02	0.00e+00	894.00
IUUC-Tru-117635	Takifugu rubripes	31.92	0.00e+00	876.00
IUUC-Tsy-119551	Tarsius syrichta	32.40	1.00e-143	506.00
IUUC-Tni-119727	Tetraodon nigroviridis	31.87	0.00e+00	872.00
IUUC-Tca-121017	Theobroma cacao	60.36	0.00e+00	5615.00
IUUC-Tae-122892	Triticum aestivum	99.48	0.00e+00	645.00
IUUC-Tur-126292	Triticum urartu	99.26	0.00e+00	9613.00
IUUC-Tbe-127560	Tupaia belangeri	36.26	5.00e-12	65.90
IUUC-Ttr-128332	Tursiops truncatus	34.11	1.00e-136	483.00
IUUC-Vpa-130615	Vicugna pacos	24.86	6.00e-40	161.00
IUUC-Vvi-131435	Vitis vinifera	60.65	0.00e+00	5476.00
IUUC-Xtr-132130	Xenopus tropicalis	32.84	2.00e-152	534.00
IUUC-Xma-133859	Xiphophorus maculatus	31.95	0.00e+00	877.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence