iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pma-094165

UUCD1 version

UUC-PeM-00259

Ensembl Protein ID

ENSPMAP00000005347.1

UniProt Accession

S4RJG5; S4RJG5_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000004860.1	ENSPMAT00000005367.1	ENSPMAP00000005347.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-47	154.9	322	359
UBD/Beta-Prp	1.40e-76	256.7	231	531

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  v ++a+    d++lvsGs D+t+k+WDl +g +
   Q: 322  GHAHAVGAVAWsrlKDGFLVSGSQDCTLKLWDLPKGLS 359
           7999999******988****************998865 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls....tgkcv 87
           ++ g++++v+  vkf  + +s++a++  ++ ik++++++  + + l gh + v a++ s++g +l+++s+Drt++vw+++       cv
   Q: 231  QFVGYNDEVLD-VKFlGKTDSHVAVATNSAQIKIFQLDSSHC-QLLHGHRDMVLALDVSRRGTMLASSSKDRTVRVWSMEeasgHVRCV 317
           66788888888.99999999*******************888.888*******************************999888899*** PP
   S: 88   htlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWd 165
            + +gh + v ++++s+ ++ +lvsGs+d t+++wdl++g   +           t++ hd+ vn+v+v+p+++l++sGs D tvrlW 
   Q: 318  AVATGHAHAVGAVAWSRlKDGFLVSGSQDCTLKLWDLPKGLSPSGtattaltcrfTEKAHDKDVNSVAVSPNDRLVASGSQDHTVRLWA 406
           *****************777*******************988877899***************************************** PP
   S: 166  l...................................ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
           +                                       +l+t++g h+ sv ++ f   g++l++ + dg vklw ++t+ecvrtl 
   Q: 407  VaakkkkeeeggglrgpvavlrghrrgvcsvrlwglHDFACLKTFEG-HDASVLKVVFVARGTQLLTSGSDGLVKLWTIKTNECVRTLD 494
           ***********************************99999******9.***************************************** PP
   S: 220  ghtdnvksvrfspnderlvsgssDgsiriW.dlrsgd 255
           +h+  v+ ++ s++der+++g+sD  i +W d+++ +
   Q: 495  AHDGKVWGLHGSRDDERVLTGGSDACIVLWkDVTQEE 531
           ******************************8777665 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

CDAFLGGAGS SDATIKVWDI VKQYCTHNFR GSSGVVGVVA FHPDTSCPRV LSAASDCKIR 60
VWDLQSGACS ATLDGHYSAV TALRFACDGR TLLSAGRDSV VLLWELEAGV VRKTVPVYEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGACGCTT TTCTCGGTGG CGCAGGGAGC AGCGATGCCA CCATCAAGGT GTGGGACATC 60
GTCAAGCAGT ACTGTACCCA CAACTTCCGC GGCTCGTCGG GTGTCGTCGG GTGAGTGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030098--P:lymphocyte differentiation
GO:0010564--P:regulation of cell cycle process
GO:0006364--P:rRNA processing
GO:0048538--P:thymus development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	34.54	1.00e-114	405.00
IUUC-Aml-002376	Ailuropoda melanoleuca	51.85	0.00e+00	691.00
IUUC-Atr-002486	Amborella trichopoda	37.98	2.00e-129	454.00
IUUC-Apl-003519	Anas platyrhynchos	44.12	7.00e-157	546.00
IUUC-Aca-004363	Anolis carolinensis	48.28	6.00e-91	326.00
IUUC-Aly-006152	Arabidopsis lyrata	33.20	2.00e-109	388.00
IUUC-Ath-006966	Arabidopsis thaliana	33.33	1.00e-110	392.00
IUUC-Ago-007746	Ashbya gossypii	26.87	8.00e-72	263.00
IUUC-Acl-008009	Aspergillus clavatus	26.34	5.00e-76	278.00
IUUC-Afl-008681	Aspergillus flavus	26.51	1.00e-66	247.00
IUUC-Afu-008798	Aspergillus fumigatus	26.20	2.00e-73	269.00
IUUC-Ani-009278	Aspergillus nidulans	26.22	5.00e-75	274.00
IUUC-Ang-009640	Aspergillus niger	27.45	8.00e-71	260.00
IUUC-Aor-010160	Aspergillus oryzae	26.29	1.00e-66	246.00
IUUC-Ate-010320	Aspergillus terreus	26.74	4.00e-77	281.00
IUUC-Ame-010930	Astyanax mexicanus	52.69	6.00e-28	115.00
IUUC-Bgr-012054	Blumeria graminis	28.34	1.00e-83	303.00
IUUC-Bta-012611	Bos taurus	52.77	0.00e+00	657.00
IUUC-Bci-013797	Botrytis cinerea	28.21	1.00e-85	309.00
IUUC-Bdi-014384	Brachypodium distachyon	35.92	3.00e-121	428.00
IUUC-Bol-015097	Brassica oleracea	34.20	6.00e-109	387.00
IUUC-Bra-017798	Brassica rapa	34.19	5.00e-111	394.00
IUUC-Cel-018664	Caenorhabditis elegans	31.35	1.00e-93	335.00
IUUC-Cja-019092	Callithrix jacchus	53.19	0.00e+00	706.00
IUUC-Cfa-021040	Canis familiaris	51.56	0.00e+00	693.00
IUUC-Cpo-022529	Cavia porcellus	51.91	0.00e+00	662.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	45.77	3.00e-31	125.00
IUUC-Csa-024205	Chlorocebus sabaeus	53.48	0.00e+00	705.00
IUUC-Cin-025560	Ciona intestinalis	45.61	7.00e-168	582.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	29.95	2.00e-93	335.00
IUUC-Cne-027082	Cryptococcus neoformans	31.17	5.00e-102	364.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.87	8.00e-21	95.10
IUUC-Dre-028138	Danio rerio	46.34	0.00e+00	642.00
IUUC-Dno-029914	Dasypus novemcinctus	45.28	2.00e-122	431.00
IUUC-Dor-030685	Dipodomys ordii	49.00	6.00e-128	449.00
IUUC-Dse-031429	Dothistroma septosporum	27.51	1.00e-73	270.00
IUUC-Dme-031995	Drosophila melanogaster	29.56	3.00e-82	298.00
IUUC-Ete-033086	Echinops telfairi	56.98	3.00e-130	457.00
IUUC-Eca-034354	Equus caballus	52.84	0.00e+00	668.00
IUUC-Eeu-034832	Erinaceus europaeus	56.68	2.00e-140	491.00
IUUC-Fca-036136	Felis catus	56.90	2.00e-148	518.00
IUUC-Fal-036859	Ficedula albicollis	54.24	0.00e+00	746.00
IUUC-Fox-037863	Fusarium oxysporum	27.91	3.00e-85	308.00
IUUC-Fso-038389	Fusarium solani	27.88	1.00e-85	309.00
IUUC-Gmo-038711	Gadus morhua	50.58	0.00e+00	666.00
IUUC-Ggr-039820	Gaeumannomyces graminis	27.06	2.00e-71	262.00
IUUC-Gga-040263	Gallus gallus	52.73	0.00e+00	729.00
IUUC-Gac-041291	Gasterosteus aculeatus	54.51	0.00e+00	763.00
IUUC-Gma-044026	Glycine max	36.88	1.00e-124	439.00
IUUC-Ggo-044693	Gorilla gorilla	53.33	0.00e+00	687.00
IUUC-Hsa-046048	Homo sapiens	53.19	0.00e+00	687.00
IUUC-Hvu-047608	Hordeum vulgare	36.34	9.00e-124	436.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	52.76	0.00e+00	713.00
IUUC-Kpa-049209	Komagataella pastoris	29.85	7.00e-87	313.00
IUUC-Lch-050085	Latimeria chalumnae	53.40	0.00e+00	690.00
IUUC-Lpe-050945	Leersia perrieri	36.44	2.00e-121	428.00
IUUC-Loc-052679	Lepisosteus oculatus	55.35	0.00e+00	768.00
IUUC-Laf-053685	Loxodonta africana	50.78	7.00e-178	615.00
IUUC-Mcc-055861	Macaca mulatta	53.33	0.00e+00	687.00
IUUC-Meu-056820	Macropus eugenii	45.93	6.00e-93	333.00
IUUC-Mor-057234	Magnaporthe oryzae	27.06	1.00e-75	276.00
IUUC-Mpo-057456	Magnaporthe poae	28.02	4.00e-56	211.00
IUUC-Mtr-058122	Medicago truncatula	36.60	6.00e-124	437.00
IUUC-Mla-058980	Melampsora laricipopulina	31.40	3.00e-82	298.00
IUUC-Mga-060080	Meleagris gallopavo	51.70	0.00e+00	724.00
IUUC-Mvi-060338	Microbotryum violaceum	39.10	2.00e-119	422.00
IUUC-Mmr-060762	Microcebus murinus	53.05	0.00e+00	679.00
IUUC-Mdo-061975	Monodelphis domestica	53.12	0.00e+00	664.00
IUUC-Mmu-064038	Mus musculus	52.13	0.00e+00	668.00
IUUC-Mac-065189	Musa acuminata	34.73	2.00e-121	429.00
IUUC-Mpu-066526	Mustela putorius furo	50.92	0.00e+00	657.00
IUUC-Mlu-067716	Myotis lucifugus	52.56	0.00e+00	714.00
IUUC-Nfi-068474	Neosartorya fischeri	26.17	3.00e-73	268.00
IUUC-Ncr-068826	Neurospora crassa	27.00	5.00e-72	264.00
IUUC-Nle-069832	Nomascus leucogenys	52.91	0.00e+00	702.00
IUUC-Opr-071183	Ochotona princeps	51.70	0.00e+00	679.00
IUUC-Ont-072371	Oreochromis niloticus	54.43	0.00e+00	749.00
IUUC-Oan-073491	Ornithorhynchus anatinus	50.85	2.00e-168	584.00
IUUC-Oba-075963	Oryza barthii	36.67	1.00e-127	449.00
IUUC-Obr-076173	Oryza brachyantha	37.22	7.00e-126	443.00
IUUC-Ogl-077692	Oryza glaberrima	36.67	1.00e-127	449.00
IUUC-Ogu-078965	Oryza glumaepatula	36.67	2.00e-127	448.00
IUUC-Oin-079708	Oryza indica	36.81	1.00e-128	452.00
IUUC-Olo-080679	Oryza longistaminata	37.08	4.00e-128	451.00
IUUC-Oni-082960	Oryza nivara	36.67	2.00e-128	451.00
IUUC-Opu-083282	Oryza punctata	36.53	2.00e-122	432.00
IUUC-Oru-085224	Oryza rufipogon	36.81	1.00e-128	452.00
IUUC-Osa-085320	Oryza sativa	36.81	1.00e-128	452.00
IUUC-Ola-086370	Oryzias latipes	64.29	3.00e-82	298.00
IUUC-Olu-087814	Ostreococcus lucimarinus	32.48	1.00e-81	296.00
IUUC-Oga-088458	Otolemur garnettii	52.34	0.00e+00	714.00
IUUC-Oar-090032	Ovis aries	47.27	6.00e-156	542.00
IUUC-Ptr-090749	Pan troglodytes	53.19	0.00e+00	681.00
IUUC-Pan-091691	Papio anubis	51.06	0.00e+00	640.00
IUUC-Psi-093200	Pelodiscus sinensis	55.04	0.00e+00	754.00
IUUC-Pno-095048	Phaeosphaeria nodorum	28.50	6.00e-73	267.00
IUUC-Ppa-095336	Physcomitrella patens	38.14	4.00e-126	444.00
IUUC-Pfo-096132	Poecilia formosa	54.28	0.00e+00	739.00
IUUC-Pab-097855	Pongo abelii	53.33	0.00e+00	704.00
IUUC-Pop-099858	Populus trichocarpa	35.95	9.00e-118	416.00
IUUC-Pca-100232	Procavia capensis	56.81	1.00e-59	223.00
IUUC-Ppe-101665	Prunus persica	36.51	3.00e-126	444.00
IUUC-Pva-102178	Pteropus vampyrus	52.20	0.00e+00	676.00
IUUC-Pgr-103288	Puccinia graminis	28.19	4.00e-66	244.00
IUUC-Ptt-103808	Puccinia triticina	28.25	1.00e-66	246.00
IUUC-Pte-104205	Pyrenophora teres	28.27	2.00e-77	282.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	27.86	7.00e-78	283.00
IUUC-Rno-105617	Rattus norvegicus	52.77	0.00e+00	679.00
IUUC-Sce-106281	Saccharomyces cerevisiae	27.93	2.00e-73	268.00
IUUC-Sha-107378	Sarcophilus harrisii	52.05	0.00e+00	657.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.06	2.00e-95	342.00
IUUC-Spo-108361	Schizosaccharomyces pombe	28.24	4.00e-75	274.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	27.86	5.00e-90	324.00
IUUC-Smo-109257	Selaginella moellendorffii	35.80	1.00e-122	432.00
IUUC-Sit-110258	Setaria italica	35.64	1.00e-124	439.00
IUUC-Sly-111521	Solanum lycopersicum	35.78	1.00e-118	419.00
IUUC-Stu-112718	Solanum tuberosum	38.78	5.00e-22	95.10
IUUC-Sar-113586	Sorex araneus	65.93	2.00e-39	155.00
IUUC-Sbi-114768	Sorghum bicolor	36.20	8.00e-127	446.00
IUUC-Sre-115159	Sporisorium reilianum	33.13	7.00e-73	267.00
IUUC-Ssc-116342	Sus scrofa	38.46	1.00e-103	369.00
IUUC-Tgu-117320	Taeniopygia guttata	51.91	0.00e+00	683.00
IUUC-Tru-118024	Takifugu rubripes	54.29	0.00e+00	741.00
IUUC-Tni-119971	Tetraodon nigroviridis	54.02	0.00e+00	723.00
IUUC-Tca-121248	Theobroma cacao	36.57	1.00e-120	425.00
IUUC-Tre-122079	Trichoderma reesei	29.38	3.00e-83	301.00
IUUC-Tvi-122554	Trichoderma virens	28.96	2.00e-84	305.00
IUUC-Tae-125845	Triticum aestivum	36.62	9.00e-126	442.00
IUUC-Tur-126436	Triticum urartu	33.78	2.00e-111	395.00
IUUC-Tme-126942	Tuber melanosporum	31.52	1.00e-97	349.00
IUUC-Tbe-128000	Tupaia belangeri	62.32	5.00e-44	171.00
IUUC-Ttr-128964	Tursiops truncatus	51.21	0.00e+00	675.00
IUUC-Uma-129473	Ustilago maydis	31.42	1.00e-73	270.00
IUUC-Vda-129749	Verticillium dahliae	28.96	2.00e-83	301.00
IUUC-Vvi-131511	Vitis vinifera	37.88	2.00e-122	432.00
IUUC-Xtr-132816	Xenopus tropicalis	47.78	0.00e+00	629.00
IUUC-Xma-133672	Xiphophorus maculatus	54.56	0.00e+00	752.00
IUUC-Yli-134602	Yarrowia lipolytica	33.94	1.00e-108	385.00
IUUC-Zma-135559	Zea mays	35.08	3.00e-122	431.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence