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Tag Content
UUCD2 ID IUUC-Sbi-114694
UUCD1 version UUC-SoB-00149
Ensembl Protein ID Sb01g013700.1
UniProt Accession C5WR85; C5WR85_SORBI
Genbank Protein ID EER91177.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000760
Gene Name SORBI_001G157300
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb01g013700 Sb01g013700.1 Sb01g013700.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.60e-30 103.5 256 286
UBD/Beta-Prp 1.90e-45 156.1 154 371
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH ++++cl+f +d   l sGs D +i+ W+
   Q: 256  GHRGPISCLSFaPDsSELFSGSFDRSIMQWN 286
           8***********99999*************9 PP
   

   UBD/Beta-Prp
   S: 91   kghedsvlslsfspsgdklvsGshdrtirvwdletgqclee................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
            +h + v+++++s+++dk  s+s+d +i+ wd+etg+c +                 + +++++ v  ++ ++dg++l+sG+lDr + lWd+++ +
   Q: 154  VKHRQPVTAVALSKDSDKGFSASKDGVIMHWDVETGKCEKYiwpsenvlvshhakppVSAKRSKQVLALAASSDGRYLASGGLDRHIHLWDVRSRE 249
           469************************************99******************************************************* PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnss 266
            ++ ++g h +++ +lsf +++ el sgs d+++  w+ +  + ++ l gh++ ++ ++++  ++r+++++ D++  +W +   +   ++  ++  
   Q: 250  HIQAFSG-HRGPISCLSFAPDSSELFSGSFDRSIMQWNAEDRTYMNCLYGHQNEILTMDAL-SKDRILTVARDRTMHLW-KIPEESQLVFRAPAAA 342
           ******9.*****************************************************.899999***********.5667777888888855 PP
   S: 267  visvavlsfgdnvlvlgsedskvniwklkk 296
           +  +++  ++d+++++gs+d+++++w+  +
   Q: 343  SLESCC-FIDDKEFLSGSDDGSIELWSIMR 371
           555555.49*****************9865 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MAPRPRKRAS RPKPRPGSRR GGGGGDDDPF FESEPKRRRG GRDEDIESED SDDDGGVAAV 60
GGGFDEDGDG GGEEEDEETV GEKKMRMAKE WLQKVTEVAK RGQEDDDEDE DESGGRRVAE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114694|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GACTCGCTTC CCCCAAACTC TCGTGCTCAC CCCCCGGCGG CGGCGGCGGC GGCGAAACAC 60
CGCGTTGCCT TCCACCGAAA TCCTAGCGCA AGCGTGAGCG CTCGCTTTCC CCACCAGACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114694|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0006364--P:rRNA processing
KEGG sbi:SORBI_01g013700
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000586 Aegilops tauschii 66.67 8.00e-175 605.00
IUUC-Aml-002072 Ailuropoda melanoleuca 37.37 7.00e-71 260.00
IUUC-Atr-002824 Amborella trichopoda 59.13 2.00e-131 461.00
IUUC-Apl-003264 Anas platyrhynchos 37.94 2.00e-71 261.00
IUUC-Aca-004898 Anolis carolinensis 38.01 1.00e-74 273.00
IUUC-Aly-005535 Arabidopsis lyrata 56.92 2.00e-127 448.00
IUUC-Ath-007003 Arabidopsis thaliana 57.44 8.00e-128 449.00
IUUC-Ago-007710 Ashbya gossypii 28.22 7.00e-35 140.00
IUUC-Acl-008345 Aspergillus clavatus 32.68 2.00e-37 149.00
IUUC-Afl-008718 Aspergillus flavus 33.07 5.00e-38 151.00
IUUC-Afu-008966 Aspergillus fumigatus 33.46 7.00e-38 151.00
IUUC-Ani-009214 Aspergillus nidulans 34.50 7.00e-40 157.00
IUUC-Ang-009774 Aspergillus niger 32.68 8.00e-38 150.00
IUUC-Aor-009956 Aspergillus oryzae 33.07 5.00e-38 151.00
IUUC-Ate-010449 Aspergillus terreus 33.46 6.00e-38 151.00
IUUC-Ame-011860 Astyanax mexicanus 36.36 1.00e-73 269.00
IUUC-Bgr-012213 Blumeria graminis 30.00 1.00e-45 177.00
IUUC-Bta-012698 Bos taurus 37.37 2.00e-70 258.00
IUUC-Bci-013973 Botrytis cinerea 30.42 7.00e-44 171.00
IUUC-Bdi-014790 Brachypodium distachyon 70.30 0.00e+00 634.00
IUUC-Bol-016068 Brassica oleracea 56.15 7.00e-126 443.00
IUUC-Bra-017410 Brassica rapa 52.56 1.00e-116 412.00
IUUC-Cel-018616 Caenorhabditis elegans 32.09 3.00e-49 188.00
IUUC-Cja-019532 Callithrix jacchus 34.98 3.00e-68 251.00
IUUC-Cfa-020961 Canis familiaris 36.14 8.00e-69 253.00
IUUC-Cpo-021527 Cavia porcellus 36.92 1.00e-68 253.00
IUUC-Csa-023106 Chlorocebus sabaeus 36.76 3.00e-69 254.00
IUUC-Cin-025670 Ciona intestinalis 34.13 6.00e-66 243.00
IUUC-Csv-026172 Ciona savignyi 36.26 2.00e-72 265.00
IUUC-Cgl-026619 Colletotrichum gloeosporioides 34.00 2.00e-42 166.00
IUUC-Cne-027070 Cryptococcus neoformans 27.27 4.00e-36 145.00
IUUC-Cme-027125 Cyanidioschyzon merolae 27.38 2.00e-35 143.00
IUUC-Dre-027919 Danio rerio 38.13 3.00e-76 278.00
IUUC-Dno-029684 Dasypus novemcinctus 34.07 2.00e-47 182.00
IUUC-Dor-030363 Dipodomys ordii 35.81 8.00e-35 140.00
IUUC-Dse-031503 Dothistroma septosporum 28.57 2.00e-40 159.00
IUUC-Dme-031979 Drosophila melanogaster 31.46 1.00e-61 229.00
IUUC-Eca-033735 Equus caballus 36.60 4.00e-69 254.00
IUUC-Fca-036193 Felis catus 36.41 7.00e-71 260.00
IUUC-Fal-037058 Ficedula albicollis 36.67 3.00e-69 254.00
IUUC-Fox-038036 Fusarium oxysporum 29.01 3.00e-47 181.00
IUUC-Fso-038298 Fusarium solani 31.29 1.00e-45 176.00
IUUC-Gmo-038796 Gadus morhua 39.20 8.00e-64 236.00
IUUC-Ggr-040074 Gaeumannomyces graminis 34.50 2.00e-42 166.00
IUUC-Gga-040743 Gallus gallus 38.91 1.00e-59 222.00
IUUC-Gac-042583 Gasterosteus aculeatus 34.65 5.00e-72 264.00
IUUC-Gma-042659 Glycine max 58.43 2.00e-139 488.00
IUUC-Ggo-045543 Gorilla gorilla 36.76 4.00e-69 254.00
IUUC-Hsa-047017 Homo sapiens 36.76 1.00e-68 253.00
IUUC-Hvu-047173 Hordeum vulgare 74.14 0.00e+00 660.00
IUUC-Itr-048062 Ictidomys tridecemlineatus 37.18 3.00e-72 265.00
IUUC-Kpa-049262 Komagataella pastoris 28.95 8.00e-35 140.00
IUUC-Lch-050566 Latimeria chalumnae 37.91 2.00e-68 251.00
IUUC-Lpe-051651 Leersia perrieri 80.32 0.00e+00 686.00
IUUC-Loc-051997 Lepisosteus oculatus 38.00 2.00e-72 266.00
IUUC-Lma-053182 Leptosphaeria maculans 26.32 6.00e-30 124.00
IUUC-Laf-054105 Loxodonta africana 35.73 7.00e-67 246.00
IUUC-Mcc-055215 Macaca mulatta 36.50 6.00e-69 253.00
IUUC-Meu-055943 Macropus eugenii 35.46 1.00e-65 242.00
IUUC-Mor-057069 Magnaporthe oryzae 27.99 2.00e-48 186.00
IUUC-Mpo-057358 Magnaporthe poae 34.10 4.00e-40 158.00
IUUC-Mtr-058209 Medicago truncatula 61.95 3.00e-139 487.00
IUUC-Mla-059043 Melampsora laricipopulina 24.89 7.00e-32 131.00
IUUC-Mga-060024 Meleagris gallopavo 36.93 3.00e-64 238.00
IUUC-Mvi-060371 Microbotryum violaceum 27.20 3.00e-45 176.00
IUUC-Mmr-061403 Microcebus murinus 35.70 2.00e-69 255.00
IUUC-Mdo-063026 Monodelphis domestica 35.71 7.00e-69 253.00
IUUC-Mmu-063646 Mus musculus 37.79 4.00e-72 264.00
IUUC-Mac-065149 Musa acuminata 68.26 3.00e-160 557.00
IUUC-Mpu-065760 Mustela putorius furo 36.86 3.00e-70 258.00
IUUC-Mlu-067963 Myotis lucifugus 37.02 1.00e-69 255.00
IUUC-Nfi-068288 Neosartorya fischeri 34.38 1.00e-37 150.00
IUUC-Ncr-068679 Neurospora crassa 27.39 5.00e-39 154.00
IUUC-Nle-069766 Nomascus leucogenys 38.93 4.00e-59 221.00
IUUC-Opr-070906 Ochotona princeps 36.76 4.00e-70 258.00
IUUC-Ont-071661 Oreochromis niloticus 38.00 1.00e-76 280.00
IUUC-Oan-073465 Ornithorhynchus anatinus 30.66 4.00e-48 184.00
IUUC-Ocu-074263 Oryctolagus cuniculus 37.28 2.00e-70 258.00
IUUC-Oba-075607 Oryza barthii 85.01 4.00e-176 609.00
IUUC-Obr-076581 Oryza brachyantha 76.70 2.00e-73 268.00
IUUC-Ogl-077387 Oryza glaberrima 79.45 0.00e+00 671.00
IUUC-Ogu-078323 Oryza glumaepatula 79.49 0.00e+00 645.00
IUUC-Oin-079977 Oryza indica 72.06 2.00e-147 514.00
IUUC-Olo-080857 Oryza longistaminata 80.37 0.00e+00 644.00
IUUC-Ome-081568 Oryza meridionalis 80.23 0.00e+00 647.00
IUUC-Oni-082685 Oryza nivara 80.09 0.00e+00 669.00
IUUC-Opu-084049 Oryza punctata 78.34 0.00e+00 640.00
IUUC-Oru-084348 Oryza rufipogon 80.09 0.00e+00 669.00
IUUC-Osa-086076 Oryza sativa 80.09 0.00e+00 669.00
IUUC-Ola-086991 Oryzias latipes 37.25 1.00e-73 269.00
IUUC-Olu-087891 Ostreococcus lucimarinus 40.06 2.00e-69 255.00
IUUC-Oga-088991 Otolemur garnettii 36.25 5.00e-68 251.00
IUUC-Oar-090430 Ovis aries 37.37 2.00e-70 259.00
IUUC-Ptr-091359 Pan troglodytes 36.50 6.00e-69 253.00
IUUC-Pan-092499 Papio anubis 36.25 2.00e-68 252.00
IUUC-Pma-094447 Petromyzon marinus 30.91 9.00e-46 176.00
IUUC-Pno-095008 Phaeosphaeria nodorum 24.65 1.00e-30 127.00
IUUC-Ppa-095680 Physcomitrella patens 50.61 5.00e-110 390.00
IUUC-Pfo-096430 Poecilia formosa 37.82 6.00e-75 273.00
IUUC-Pab-097649 Pongo abelii 37.02 4.00e-69 254.00
IUUC-Pop-100037 Populus trichocarpa 62.05 5.00e-142 496.00
IUUC-Pca-100317 Procavia capensis 45.90 4.00e-28 118.00
IUUC-Ppe-101999 Prunus persica 59.05 5.00e-144 503.00
IUUC-Pva-103046 Pteropus vampyrus 36.50 3.00e-69 254.00
IUUC-Pgr-103655 Puccinia graminis 29.40 1.00e-36 147.00
IUUC-Ptt-103812 Puccinia triticina 27.37 5.00e-30 124.00
IUUC-Pte-104243 Pyrenophora teres 26.94 2.00e-31 130.00
IUUC-Pyt-104512 Pyrenophora triticirepentis 26.94 1.00e-31 130.00
IUUC-Rno-104973 Rattus norvegicus 37.02 5.00e-71 261.00
IUUC-Sce-106329 Saccharomyces cerevisiae 28.70 1.00e-34 140.00
IUUC-Sha-106941 Sarcophilus harrisii 36.73 3.00e-69 254.00
IUUC-Sja-107821 Schizosaccharomyces japonicus 30.46 1.00e-48 186.00
IUUC-Spo-108329 Schizosaccharomyces pombe 30.11 4.00e-48 185.00
IUUC-Ssl-108552 Sclerotinia sclerotiorum 30.72 2.00e-45 176.00
IUUC-Smo-109198 Selaginella moellendorffii 48.45 5.00e-91 327.00
IUUC-Sit-109694 Setaria italica 81.71 0.00e+00 746.00
IUUC-Sly-111294 Solanum lycopersicum 60.51 6.00e-142 496.00
IUUC-Stu-112747 Solanum tuberosum 61.01 3.00e-142 497.00
IUUC-Sar-113315 Sorex araneus 37.32 2.00e-22 99.40
IUUC-Sre-114937 Sporisorium reilianum 27.43 8.00e-45 174.00
IUUC-Ssc-116127 Sus scrofa 36.86 2.00e-69 255.00
IUUC-Tgu-117242 Taeniopygia guttata 35.71 3.00e-46 177.00
IUUC-Tru-118285 Takifugu rubripes 38.30 1.00e-81 296.00
IUUC-Tni-120368 Tetraodon nigroviridis 39.95 1.00e-80 293.00
IUUC-Tca-121724 Theobroma cacao 57.51 3.00e-135 474.00
IUUC-Tre-122106 Trichoderma reesei 30.77 1.00e-42 166.00
IUUC-Tvi-122526 Trichoderma virens 30.29 2.00e-43 169.00
IUUC-Tae-122939 Triticum aestivum 71.54 0.00e+00 662.00
IUUC-Tur-126548 Triticum urartu 71.54 0.00e+00 662.00
IUUC-Tme-126985 Tuber melanosporum 29.92 4.00e-47 181.00
IUUC-Tbe-127923 Tupaia belangeri 36.34 9.00e-69 253.00
IUUC-Ttr-129308 Tursiops truncatus 34.02 2.00e-59 222.00
IUUC-Uma-129472 Ustilago maydis 29.13 5.00e-40 158.00
IUUC-Vda-129910 Verticillium dahliae 30.68 2.00e-46 179.00
IUUC-Vvi-131683 Vitis vinifera 60.46 9.00e-146 509.00
IUUC-Xtr-132118 Xenopus tropicalis 38.14 2.00e-71 261.00
IUUC-Xma-133804 Xiphophorus maculatus 37.18 1.00e-74 272.00
IUUC-Yli-134639 Yarrowia lipolytica 30.23 1.00e-34 140.00
IUUC-Zma-135884 Zea mays 96.28 0.00e+00 833.00
Created Date 25-Jun-2017

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