iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006643

UUCD1 version

UUC-ArT-00086

Ensembl Protein ID

AT3G43700.1

UniProt Accession

A1L4W5; Q9M2B6; BPM6_ARATH

Genbank Protein ID

CAB83071.1; AEE77819.1; ABM06022.1

Protein Name

BTB/POZ and MATH domain-containing protein 6; Protein BTB-POZ AND MATH DOMAIN 6

Genbank Nucleotide ID

AL138638; CP002686; BT029752

Gene Name

BPM6; At3g43700; F23N14_80

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G43700	AT3G43700.2	AT3G43700.2
AT3G43700	AT3G43700.1	AT3G43700.1
AT3G43700	AT3G43700.3	AT3G43700.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/BCR/BTB_Other	BTB_Other	15772280

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB	4.10e-21	76.0	205	268
E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box	3.20e-06	26.5	295	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmeleesksklmveikdvqpevfrallkFlYtgkld 66
           +Dv++ v+ge+f+ahk+vLaa+S++F+++f++ l e+  ++ v+i+d++p+vf+all+F+Y ++l+
   Q: 205  SDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAEN--NSDVVISDLEPKVFKALLHFMYKDSLP 268
           6***********************************9..599********************9986 PP

E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box

   S: 7    ilrfAdlydcpdLkdaaldfilk 29
           +l++A++y++++L++ ++++i+k
   Q: 295  LLAAAEMYNLSRLRLLCESHICK 317
           6899******************8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Heterodimer with BPM1. Interacts with RAP2-4. Interacts with CUL3A. Binds to MYB56 at the promoter of FLOWERING LOCUS T (FT) (PubMed:25343985).

Protein Sequence
(Fasta)

MSKLMTRTSG SSSPNTIPDQ IESPTSSRSV TQTTNGSHQF VIQGYSLAKG IGVGKHIASD 60
NFSVGGYQWT IFVYPDGKNP EDNSSYVSVF IVLASECTEV RALFELSLVD QSGKGKHKVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTAGACT CGCAACCAAA CAATCTCTCT ACTTATTGGG GTTTTCCTTA AGACAATGAC 60
AATTATACCC TCTTCATCAA TCATCATCAA TTTTCGTCTT CCCGTTTCTT CTTTGTTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000210--BTB/POZ_dom
IPR002083--MATH/TRAF_dom
IPR011333--SKP1/BTB/POZ
IPR008974--TRAF-like

PROSITE

PS50097--BTB
PS50144--MATH

Pfam

PF00651--BTB
PF00917--MATH

SMART

SM00225--BTB
SM00061--MATH

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0071472--P:cellular response to salt stress
GO:0016567--P:protein ubiquitination
GO:0006970--P:response to osmotic stress

KEGG

ath:AT3G43700

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006549	Arabidopsis lyrata	92.05	0.00e+00	771.00
IUUC-Afl-008695	Aspergillus flavus	36.62	3.00e-03	35.40
IUUC-Ani-009467	Aspergillus nidulans	27.16	7.00e-07	47.40
IUUC-Aor-010003	Aspergillus oryzae	37.31	2.00e-03	35.40
IUUC-Cme-027245	Cyanidioschyzon merolae	25.95	1.00e-12	68.20
IUUC-Pno-094910	Phaeosphaeria nodorum	31.18	5.00e-07	47.40
IUUC-Pca-100243	Procavia capensis	33.33	2.00e-23	102.00
IUUC-Pyt-104494	Pyrenophora triticirepentis	27.85	7.00e-05	40.40
IUUC-Sre-115044	Sporisorium reilianum	26.95	1.00e-04	41.20

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence