iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012596

Ensembl Protein ID

ENSBTAP00000018687.4

UniProt Accession

F6R129; F6R129_BOVIN

Genbank Protein ID

ENSBTAP00000018687

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02018776

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000014058.5	ENSBTAT00000018687.4	ENSBTAP00000018687.4

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	63.61	7.00e-124	440.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Bos taurus

Protein Sequence
(Fasta)

MSSTPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYVLKHSKES YHNSSITVDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCAGCA CACCACATGA CCCCTTCTAT TCTTCTCCTT TCGGACCGTT CTATAGGAGA 60
CACACACCCT ATATGGTACA ACCAGAGTAC CGAATCTATG AGATGAACAA GAGGCTGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0001942--P:hair follicle development
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance

KEGG

bta:617976

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	23.18	3.00e-03	37.40
IUUC-Aml-002031	Ailuropoda melanoleuca	76.26	2.00e-150	525.00
IUUC-Atr-003083	Amborella trichopoda	21.39	3.00e-04	40.80
IUUC-Apl-004210	Anas platyrhynchos	80.42	8.00e-119	419.00
IUUC-Aca-005241	Anolis carolinensis	77.09	1.00e-150	526.00
IUUC-Aly-006204	Arabidopsis lyrata	25.00	1.00e-06	49.30
IUUC-Ath-007339	Arabidopsis thaliana	25.00	1.00e-06	49.30
IUUC-Ame-010910	Astyanax mexicanus	73.11	6.00e-149	520.00
IUUC-Bgr-012180	Blumeria graminis	21.74	1.00e-06	48.50
IUUC-Bci-013927	Botrytis cinerea	27.95	3.00e-08	53.90
IUUC-Bol-015721	Brassica oleracea	24.55	4.00e-07	50.40
IUUC-Bra-017183	Brassica rapa	25.00	4.00e-07	50.40
IUUC-Cel-018189	Caenorhabditis elegans	34.21	3.00e-29	123.00
IUUC-Cja-019586	Callithrix jacchus	97.59	0.00e+00	680.00
IUUC-Cfa-021188	Canis familiaris	76.26	3.00e-150	525.00
IUUC-Cpo-022350	Cavia porcellus	76.26	6.00e-148	516.00
IUUC-Csa-023816	Chlorocebus sabaeus	76.54	3.00e-149	521.00
IUUC-Cho-024958	Choloepus hoffmanni	80.58	3.00e-94	338.00
IUUC-Cin-025721	Ciona intestinalis	52.35	2.00e-93	335.00
IUUC-Csv-026065	Ciona savignyi	54.06	6.00e-97	347.00
IUUC-Dre-027356	Danio rerio	82.22	0.00e+00	628.00
IUUC-Dno-029918	Dasypus novemcinctus	76.90	4.00e-146	511.00
IUUC-Dor-030634	Dipodomys ordii	76.26	4.00e-149	520.00
IUUC-Dse-031245	Dothistroma septosporum	25.00	6.00e-04	39.70
IUUC-Dme-031667	Drosophila melanogaster	63.64	2.00e-124	439.00
IUUC-Ete-032246	Echinops telfairi	95.43	0.00e+00	658.00
IUUC-Eca-034015	Equus caballus	98.12	0.00e+00	684.00
IUUC-Eeu-034902	Erinaceus europaeus	76.26	4.00e-149	520.00
IUUC-Fca-035903	Felis catus	75.83	5.00e-149	520.00
IUUC-Fal-037407	Ficedula albicollis	96.77	0.00e+00	658.00
IUUC-Gmo-039466	Gadus morhua	74.37	7.00e-154	536.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.39	7.00e-05	43.10
IUUC-Gga-040214	Gallus gallus	77.53	2.00e-152	531.00
IUUC-Gac-042214	Gasterosteus aculeatus	73.96	3.00e-155	541.00
IUUC-Gma-042794	Glycine max	24.34	2.00e-08	55.10
IUUC-Ggo-044988	Gorilla gorilla	97.59	0.00e+00	686.00
IUUC-Hsa-046092	Homo sapiens	98.38	0.00e+00	689.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	76.26	7.00e-149	520.00
IUUC-Lch-049895	Latimeria chalumnae	84.27	2.00e-104	371.00
IUUC-Lpe-050806	Leersia perrieri	25.69	7.00e-05	42.70
IUUC-Loc-052845	Lepisosteus oculatus	74.79	3.00e-152	531.00
IUUC-Lma-053090	Leptosphaeria maculans	25.20	4.00e-06	46.60
IUUC-Laf-054538	Loxodonta africana	75.34	6.00e-153	533.00
IUUC-Mcc-055116	Macaca mulatta	98.64	1.00e-153	535.00
IUUC-Meu-056777	Macropus eugenii	70.95	6.00e-134	470.00
IUUC-Mpo-057376	Magnaporthe poae	23.70	4.00e-05	43.90
IUUC-Mtr-058142	Medicago truncatula	25.38	5.00e-08	53.50
IUUC-Mga-059716	Meleagris gallopavo	95.69	0.00e+00	652.00
IUUC-Mmr-060649	Microcebus murinus	97.05	0.00e+00	681.00
IUUC-Mdo-062535	Monodelphis domestica	96.25	0.00e+00	660.00
IUUC-Mmu-064036	Mus musculus	96.77	0.00e+00	684.00
IUUC-Mac-065338	Musa acuminata	25.14	6.00e-06	46.60
IUUC-Mpu-065719	Mustela putorius furo	76.26	7.00e-149	520.00
IUUC-Mlu-067219	Myotis lucifugus	75.28	2.00e-147	515.00
IUUC-Ncr-068691	Neurospora crassa	21.38	4.00e-04	40.40
IUUC-Nle-068983	Nomascus leucogenys	97.75	0.00e+00	645.00
IUUC-Opr-070467	Ochotona princeps	76.26	4.00e-149	520.00
IUUC-Ont-071566	Oreochromis niloticus	75.14	4.00e-156	544.00
IUUC-Oan-073368	Ornithorhynchus anatinus	77.65	8.00e-150	523.00
IUUC-Ocu-074854	Oryctolagus cuniculus	96.93	0.00e+00	649.00
IUUC-Ola-086364	Oryzias latipes	75.42	2.00e-155	542.00
IUUC-Oga-088235	Otolemur garnettii	96.51	0.00e+00	669.00
IUUC-Oar-089547	Ovis aries	76.26	2.00e-150	525.00
IUUC-Ptr-091423	Pan troglodytes	97.59	0.00e+00	680.00
IUUC-Pan-092378	Papio anubis	76.54	2.00e-149	521.00
IUUC-Psi-093638	Pelodiscus sinensis	96.25	0.00e+00	649.00
IUUC-Pma-094384	Petromyzon marinus	63.07	3.00e-54	204.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.18	6.00e-07	49.30
IUUC-Pfo-096031	Poecilia formosa	74.58	4.00e-157	547.00
IUUC-Pab-097886	Pongo abelii	97.75	0.00e+00	645.00
IUUC-Pop-099430	Populus trichocarpa	25.82	2.00e-06	48.50
IUUC-Pca-101138	Procavia capensis	76.26	4.00e-149	520.00
IUUC-Ppe-101293	Prunus persica	24.77	2.00e-07	51.20
IUUC-Pva-103215	Pteropus vampyrus	97.86	0.00e+00	686.00
IUUC-Pte-104238	Pyrenophora teres	29.49	1.00e-05	44.70
IUUC-Rno-105968	Rattus norvegicus	97.57	0.00e+00	690.00
IUUC-Sha-107595	Sarcophilus harrisii	76.82	3.00e-147	514.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	16.51	6.00e-05	42.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.03	6.00e-06	45.80
IUUC-Smo-109552	Selaginella moellendorffii	19.70	5.00e-06	47.00
IUUC-Sly-110873	Solanum lycopersicum	26.09	5.00e-07	50.40
IUUC-Stu-112586	Solanum tuberosum	21.49	1.00e-05	45.10
IUUC-Sar-113076	Sorex araneus	91.46	5.00e-135	473.00
IUUC-Sre-115143	Sporisorium reilianum	25.00	1.10e-01	32.00
IUUC-Ssc-115755	Sus scrofa	76.69	1.00e-150	526.00
IUUC-Tgu-117326	Taeniopygia guttata	96.50	0.00e+00	655.00
IUUC-Tru-117858	Takifugu rubripes	81.45	0.00e+00	634.00
IUUC-Tsy-119296	Tarsius syrichta	90.35	4.00e-177	613.00
IUUC-Tni-119822	Tetraodon nigroviridis	73.94	7.00e-155	539.00
IUUC-Tca-120935	Theobroma cacao	25.38	5.00e-08	53.50
IUUC-Tbe-127366	Tupaia belangeri	75.42	8.00e-144	503.00
IUUC-Ttr-128484	Tursiops truncatus	87.67	2.00e-170	591.00
IUUC-Vpa-130304	Vicugna pacos	98.31	6.00e-153	533.00
IUUC-Vvi-131560	Vitis vinifera	24.62	9.00e-06	45.80
IUUC-Xtr-132062	Xenopus tropicalis	77.53	1.00e-152	532.00
IUUC-Xma-134288	Xiphophorus maculatus	75.42	6.00e-157	546.00
IUUC-Yli-134374	Yarrowia lipolytica	21.26	1.00e-03	38.10
IUUC-Zma-135310	Zea mays	23.56	8.00e-04	39.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence