iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044283

UUCD1 version

UUC-GlM-02385

Ensembl Protein ID

GLYMA12G23290.1

UniProt Accession

C6TEZ7; C6TEZ7_SOYBN

Genbank Protein ID

ACU20399.1; KRH26083.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

BT096174; CM000845

Gene Name

ATRMA3; LOC100817526; GLYMA_12G151200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G23290	GLYMA12G23290.1	GLYMA12G23290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-08	37.2	37	84
E3 activity/RING/U-box	4.40e-08	34.7	32	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iC+e+  d p+v+ CgH+++  C++kw   + ++ + +++++CP+C+
   Q: 37   CNICMESAHD-PVVTLCGHLYCWPCIYKWldvQSSSVEPYQQQTCPVCK 84
           99********.9999****************877777889999*****7 PP

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk........tcPvtrqplteedlvPn 58
           ++ f C I +e  +dPvv+ +G+ y   +I kwl+ + +        tcPv++++++++++vP 
   Q: 32   YDCFDCNICMESAHDPVVTLCGHLYCWPCIYKWLDVQSSsvepyqqqTCPVCKSEISHTSVVPL 95
           678*******************************88888889999*****************96 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MESKYFDSNG EVSLKQKSKS ISAEPTISTS EYDCFDCNIC MESAHDPVVT LCGHLYCWPC 60
IYKWLDVQSS SVEPYQQQTC PVCKSEISHT SVVPLYGCGT SNSESNAKKL QMSLGIPHRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGAAGATA TTTGATATTT GTTTTTCTGT TACAAAAACT AATTAACAGA AACAAACAAA 60
GCCATTTATT TCTATCGATT AATGGTTAGT ATAAACACAT TAAATATATA CATGGTACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100817526

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006090	Arabidopsis lyrata	46.84	4.00e-43	167.00
IUUC-Ath-006841	Arabidopsis thaliana	45.99	3.00e-42	165.00
IUUC-Pno-094942	Phaeosphaeria nodorum	33.33	4.00e-09	55.50
IUUC-Pop-099944	Populus trichocarpa	52.30	3.00e-62	231.00
IUUC-Pte-104163	Pyrenophora teres	33.70	6.00e-11	60.80
IUUC-Pyt-104640	Pyrenophora triticirepentis	33.70	7.00e-11	61.20
IUUC-Sly-111596	Solanum lycopersicum	47.85	1.00e-50	192.00
IUUC-Stu-112089	Solanum tuberosum	45.61	3.00e-47	181.00
IUUC-Tca-121161	Theobroma cacao	54.01	4.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence