iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068763

Ensembl Protein ID

EAA32368

UniProt Accession

Q1K818; Q1K818_NEUCR

Genbank Protein ID

EAA32368.1

Protein Name

PHD transcription factor

Genbank Nucleotide ID

CM002240

Gene Name

NCU01238

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU01238	EAA32368	EAA32368

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.70e-17	60.7	1336	1382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C++ ++++  ++eCe+C+ew+H +Clk++   ++++++k++Cp C+
   Q: 1336 VFC-ICRRVEAGM--MIECEQCHEWYHGKCLKIA-RGKVKEDDKYTCPICD 1382
           68*.*******86..*******************.999999999******6 PP

Organism

Neurospora crassa

Protein Sequence
(Fasta)

MVSTPSGGGS VAVAAAGTSS NNASARASPT VTSHSSNGKS KTAPVNSNGY HPPKSQIPLS 60
FMKSEPLDLN SVERRGQPTA CKEPSKKKNR PHGLEEAPSY CPTEEEWKEP FEYIRKITPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTTTCAGA TCTGGGACCG GGGAGCTACT ACGCTATCAA TCAGTTCACT GCCAGTCTTG 60
GGCGCCCACA CACCTCATCC TCACACCACA TTTTATCGAT TCACCATTCA CATCGTCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

KEGG

ncr:NCU01238

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	41.56	2.00e-83	302.00
IUUC-Aml-001327	Ailuropoda melanoleuca	28.60	6.00e-98	351.00
IUUC-Atr-002595	Amborella trichopoda	38.53	4.00e-88	318.00
IUUC-Apl-003770	Anas platyrhynchos	29.59	5.00e-105	374.00
IUUC-Aca-004712	Anolis carolinensis	28.74	8.00e-100	357.00
IUUC-Aly-006097	Arabidopsis lyrata	48.57	2.00e-07	50.80
IUUC-Ath-007218	Arabidopsis thaliana	45.71	5.00e-07	49.70
IUUC-Acl-008162	Aspergillus clavatus	58.37	0.00e+00	1735.00
IUUC-Afl-008625	Aspergillus flavus	58.29	0.00e+00	1689.00
IUUC-Afu-008796	Aspergillus fumigatus	57.79	0.00e+00	1708.00
IUUC-Ani-009139	Aspergillus nidulans	57.49	0.00e+00	1665.00
IUUC-Ang-009560	Aspergillus niger	43.75	5.00e-07	48.10
IUUC-Aor-010155	Aspergillus oryzae	58.23	0.00e+00	1688.00
IUUC-Ate-010453	Aspergillus terreus	56.84	0.00e+00	1672.00
IUUC-Ame-011323	Astyanax mexicanus	29.01	9.00e-108	384.00
IUUC-Bgr-012241	Blumeria graminis	60.29	0.00e+00	1898.00
IUUC-Bta-013099	Bos taurus	38.68	2.00e-89	322.00
IUUC-Bci-013992	Botrytis cinerea	62.10	0.00e+00	1965.00
IUUC-Bdi-014050	Brachypodium distachyon	37.31	4.00e-85	308.00
IUUC-Cja-018988	Callithrix jacchus	32.97	2.00e-102	366.00
IUUC-Cfa-020954	Canis familiaris	28.31	1.00e-97	350.00
IUUC-Cpo-021718	Cavia porcellus	48.09	2.00e-79	289.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	46.00	3.00e-07	43.90
IUUC-Csa-023946	Chlorocebus sabaeus	30.14	3.00e-121	428.00
IUUC-Cho-024280	Choloepus hoffmanni	37.85	3.00e-94	338.00
IUUC-Cin-025321	Ciona intestinalis	29.54	1.00e-111	396.00
IUUC-Csv-026185	Ciona savignyi	28.54	8.00e-100	357.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	70.52	0.00e+00	2167.00
IUUC-Cne-026851	Cryptococcus neoformans	34.56	1.00e-153	536.00
IUUC-Cme-027118	Cyanidioschyzon merolae	26.23	6.00e-04	37.70
IUUC-Dre-028238	Danio rerio	29.16	2.00e-138	485.00
IUUC-Dno-029435	Dasypus novemcinctus	38.68	2.00e-89	322.00
IUUC-Dor-030226	Dipodomys ordii	29.65	5.00e-74	271.00
IUUC-Dse-031479	Dothistroma septosporum	53.55	0.00e+00	1598.00
IUUC-Dme-032021	Drosophila melanogaster	35.65	5.00e-104	371.00
IUUC-Ete-032760	Echinops telfairi	28.38	8.00e-62	231.00
IUUC-Eca-033834	Equus caballus	28.60	2.00e-97	349.00
IUUC-Eeu-034692	Erinaceus europaeus	28.70	4.00e-98	351.00
IUUC-Fca-035476	Felis catus	32.97	2.00e-102	366.00
IUUC-Fal-037631	Ficedula albicollis	34.05	1.00e-107	383.00
IUUC-Fox-037694	Fusarium oxysporum	64.49	0.00e+00	1339.00
IUUC-Fso-038127	Fusarium solani	64.01	0.00e+00	1968.00
IUUC-Gmo-039522	Gadus morhua	33.29	2.00e-104	372.00
IUUC-Ggr-039929	Gaeumannomyces graminis	62.76	0.00e+00	2175.00
IUUC-Gga-040802	Gallus gallus	30.95	1.00e-106	379.00
IUUC-Gac-041563	Gasterosteus aculeatus	34.01	4.00e-101	361.00
IUUC-Gma-042675	Glycine max	39.41	2.00e-81	296.00
IUUC-Ggo-045492	Gorilla gorilla	29.66	6.00e-119	421.00
IUUC-Hsa-046737	Homo sapiens	29.80	7.00e-119	420.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	28.60	1.00e-98	353.00
IUUC-Kpa-049245	Komagataella pastoris	24.13	7.00e-60	224.00
IUUC-Lch-050517	Latimeria chalumnae	30.25	1.00e-110	393.00
IUUC-Lpe-051537	Leersia perrieri	41.40	9.00e-86	310.00
IUUC-Loc-052550	Lepisosteus oculatus	29.74	2.00e-106	379.00
IUUC-Laf-054098	Loxodonta africana	32.21	4.00e-90	325.00
IUUC-Mcc-055740	Macaca mulatta	27.68	5.00e-125	441.00
IUUC-Meu-056643	Macropus eugenii	28.40	1.00e-99	356.00
IUUC-Mor-057198	Magnaporthe oryzae	65.73	0.00e+00	2144.00
IUUC-Mpo-057317	Magnaporthe poae	63.12	0.00e+00	2190.00
IUUC-Mtr-058113	Medicago truncatula	39.25	2.00e-79	290.00
IUUC-Mla-058837	Melampsora laricipopulina	39.66	1.00e-08	52.80
IUUC-Mga-059358	Meleagris gallopavo	31.29	2.00e-106	379.00
IUUC-Mvi-060436	Microbotryum violaceum	52.00	9.00e-11	60.10
IUUC-Mmr-061032	Microcebus murinus	32.88	3.00e-116	412.00
IUUC-Mdo-061957	Monodelphis domestica	33.78	2.00e-103	369.00
IUUC-Mmu-063943	Mus musculus	28.50	9.00e-98	350.00
IUUC-Mpu-066800	Mustela putorius furo	28.50	1.00e-96	347.00
IUUC-Mlu-067363	Myotis lucifugus	29.60	4.00e-111	395.00
IUUC-Nfi-068430	Neosartorya fischeri	59.56	0.00e+00	1734.00
IUUC-Nle-069569	Nomascus leucogenys	29.71	3.00e-118	418.00
IUUC-Opr-071002	Ochotona princeps	45.33	5.00e-78	285.00
IUUC-Ont-072274	Oreochromis niloticus	28.74	2.00e-136	478.00
IUUC-Oan-073160	Ornithorhynchus anatinus	29.55	3.00e-99	355.00
IUUC-Ocu-074440	Oryctolagus cuniculus	28.40	3.00e-96	345.00
IUUC-Oba-075388	Oryza barthii	33.26	7.00e-71	261.00
IUUC-Obr-076296	Oryza brachyantha	31.74	1.00e-74	274.00
IUUC-Ogl-077886	Oryza glaberrima	33.06	2.00e-11	63.20
IUUC-Ogu-079040	Oryza glumaepatula	33.26	8.00e-71	261.00
IUUC-Olo-080668	Oryza longistaminata	33.06	4.00e-11	63.20
IUUC-Ome-081764	Oryza meridionalis	36.32	3.00e-84	305.00
IUUC-Oni-083012	Oryza nivara	33.26	6.00e-71	261.00
IUUC-Opu-083164	Oryza punctata	27.70	1.00e-82	300.00
IUUC-Oru-084630	Oryza rufipogon	33.26	4.00e-71	262.00
IUUC-Osa-085487	Oryza sativa	33.06	2.00e-11	62.80
IUUC-Ola-087076	Oryzias latipes	33.33	1.00e-104	373.00
IUUC-Olu-087633	Ostreococcus lucimarinus	26.53	2.00e-05	42.00
IUUC-Oga-088191	Otolemur garnettii	28.01	2.00e-128	452.00
IUUC-Oar-090027	Ovis aries	38.68	3.00e-89	322.00
IUUC-Ptr-091194	Pan troglodytes	36.25	2.00e-116	411.00
IUUC-Pan-091829	Papio anubis	27.68	4.00e-125	441.00
IUUC-Psi-093918	Pelodiscus sinensis	34.01	1.00e-105	376.00
IUUC-Pma-094137	Petromyzon marinus	30.93	2.00e-104	372.00
IUUC-Pno-094879	Phaeosphaeria nodorum	55.14	0.00e+00	1615.00
IUUC-Pfo-096645	Poecilia formosa	29.84	1.00e-132	466.00
IUUC-Pab-097582	Pongo abelii	30.29	4.00e-119	421.00
IUUC-Pca-100446	Procavia capensis	28.08	2.00e-96	346.00
IUUC-Ppe-101504	Prunus persica	38.96	1.00e-84	306.00
IUUC-Pva-103035	Pteropus vampyrus	32.97	1.00e-101	363.00
IUUC-Pgr-103434	Puccinia graminis	40.33	2.00e-40	157.00
IUUC-Ptt-104009	Puccinia triticina	30.23	9.00e-09	52.80
IUUC-Pte-104195	Pyrenophora teres	57.33	0.00e+00	1653.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	57.16	0.00e+00	1644.00
IUUC-Rno-105664	Rattus norvegicus	48.21	1.00e-92	333.00
IUUC-Sce-106207	Saccharomyces cerevisiae	36.28	7.00e-71	259.00
IUUC-Sha-107506	Sarcophilus harrisii	47.92	9.00e-93	333.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	30.05	1.00e-145	509.00
IUUC-Spo-108283	Schizosaccharomyces pombe	30.59	1.00e-146	513.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	64.98	0.00e+00	2004.00
IUUC-Sit-110534	Setaria italica	31.22	5.00e-90	325.00
IUUC-Sly-111298	Solanum lycopersicum	37.77	3.00e-85	309.00
IUUC-Stu-111932	Solanum tuberosum	45.71	4.00e-06	43.10
IUUC-Sar-113052	Sorex araneus	32.60	3.00e-100	358.00
IUUC-Sre-115161	Sporisorium reilianum	39.80	4.00e-160	558.00
IUUC-Ssc-116354	Sus scrofa	28.60	2.00e-98	353.00
IUUC-Tgu-117452	Taeniopygia guttata	34.19	1.00e-103	369.00
IUUC-Tru-118604	Takifugu rubripes	30.10	3.00e-119	422.00
IUUC-Tsy-119271	Tarsius syrichta	32.31	2.00e-88	319.00
IUUC-Tni-119920	Tetraodon nigroviridis	28.27	3.00e-129	455.00
IUUC-Tca-121478	Theobroma cacao	39.58	5.00e-88	318.00
IUUC-Tre-122213	Trichoderma reesei	61.81	0.00e+00	1783.00
IUUC-Tvi-122263	Trichoderma virens	61.23	0.00e+00	1930.00
IUUC-Tae-125894	Triticum aestivum	31.17	1.00e-84	307.00
IUUC-Tur-126632	Triticum urartu	30.71	6.00e-85	308.00
IUUC-Tme-127087	Tuber melanosporum	56.13	0.00e+00	1620.00
IUUC-Tbe-128040	Tupaia belangeri	38.68	7.00e-89	320.00
IUUC-Ttr-128979	Tursiops truncatus	28.50	4.00e-97	348.00
IUUC-Uma-129590	Ustilago maydis	33.56	0.00e+00	706.00
IUUC-Vda-129733	Verticillium dahliae	64.06	0.00e+00	2140.00
IUUC-Vpa-130433	Vicugna pacos	32.63	2.00e-90	325.00
IUUC-Vvi-131071	Vitis vinifera	41.27	8.00e-69	254.00
IUUC-Xtr-132324	Xenopus tropicalis	38.54	3.00e-89	322.00
IUUC-Xma-134315	Xiphophorus maculatus	28.02	5.00e-135	474.00
IUUC-Zma-135829	Zea mays	29.40	1.00e-83	303.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence