iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114186

Ensembl Protein ID

Sb07g020610.1

UniProt Accession

C5YL03; C5YL03_SORBI

Genbank Protein ID

EES13850.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G130300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g020610	Sb07g020610.1	Sb07g020610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.50e-08	34.8	140	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C  C+ +++ ++ +v+C+ C++wfHp C+++++e+ ++ ++ + C++C 
   Q: 140  YC-KCEMPYNPDDLMVQCDACKDWFHPSCMSMTIEQAKKLDH-FVCSDCL 187
           78.7*****************************888888887.******6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAKTKQGKKD VDSYTIRGTN KLVHVGDCVL MRASDSDNQP YVARVEKMEA DGRGSVRVRV 60
RWYYRPEESK GGRRQFHGAK ELFLSDHFDL QSAHTIEGKC VVHSFKNYTK LDNVGPEDFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGAGACGCT GATCTCCCCT AAACTGCTTT CCCCCTTCTC CCCGCTCCGC CCCCAGCAGC 60
AACCACTCTT TTTCTGCTTC TGCTCCGCTC CCCTTTTCTC ATCTTGCTAG GGTTTCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

sbi:SORBI_07g020610

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	79.17	1.00e-105	374.00
IUUC-Aly-005717	Arabidopsis lyrata	71.63	2.00e-94	337.00
IUUC-Ath-007631	Arabidopsis thaliana	71.63	1.00e-94	338.00
IUUC-Ago-007912	Ashbya gossypii	43.33	3.30e-02	32.30
IUUC-Bdi-014153	Brachypodium distachyon	81.48	5.00e-106	375.00
IUUC-Bol-016238	Brassica oleracea	71.63	4.00e-97	346.00
IUUC-Bra-017570	Brassica rapa	72.09	2.00e-97	347.00
IUUC-Cin-025225	Ciona intestinalis	39.22	3.00e-08	53.10
IUUC-Csv-026099	Ciona savignyi	35.48	3.00e-09	54.70
IUUC-Cgl-026411	Colletotrichum gloeosporioides	38.10	3.00e-06	45.10
IUUC-Ggr-039960	Gaeumannomyces graminis	34.85	1.00e-05	43.90
IUUC-Gma-043039	Glycine max	75.00	2.00e-100	357.00
IUUC-Kpa-049245	Komagataella pastoris	33.33	1.00e-05	45.40
IUUC-Loc-051927	Lepisosteus oculatus	44.07	7.00e-12	65.90
IUUC-Mpo-057588	Magnaporthe poae	36.36	3.00e-06	45.80
IUUC-Mla-058837	Melampsora laricipopulina	37.50	7.00e-06	44.70
IUUC-Mac-064749	Musa acuminata	79.63	7.00e-101	358.00
IUUC-Ont-071935	Oreochromis niloticus	46.00	6.00e-09	55.80
IUUC-Oba-075188	Oryza barthii	90.38	2.00e-113	400.00
IUUC-Obr-076844	Oryza brachyantha	91.20	2.00e-118	417.00
IUUC-Ogl-077260	Oryza glaberrima	90.74	6.00e-118	415.00
IUUC-Ogu-078663	Oryza glumaepatula	84.26	3.00e-108	383.00
IUUC-Oin-079351	Oryza indica	91.20	2.00e-118	416.00
IUUC-Olo-080411	Oryza longistaminata	88.66	4.00e-107	379.00
IUUC-Ome-081822	Oryza meridionalis	90.87	7.00e-114	402.00
IUUC-Oni-082662	Oryza nivara	91.20	2.00e-118	416.00
IUUC-Opu-083591	Oryza punctata	85.19	5.00e-114	402.00
IUUC-Oru-084795	Oryza rufipogon	91.20	2.00e-118	416.00
IUUC-Osa-085385	Oryza sativa	91.20	2.00e-118	416.00
IUUC-Olu-087802	Ostreococcus lucimarinus	47.27	2.00e-45	173.00
IUUC-Pma-094621	Petromyzon marinus	43.40	2.00e-11	62.40
IUUC-Pno-094853	Phaeosphaeria nodorum	40.74	3.00e-06	46.60
IUUC-Ppa-095645	Physcomitrella patens	68.02	1.00e-85	307.00
IUUC-Pop-098948	Populus trichocarpa	72.22	8.00e-98	348.00
IUUC-Ppe-101758	Prunus persica	77.31	3.00e-102	363.00
IUUC-Pgr-103292	Puccinia graminis	31.25	9.00e-05	40.40
IUUC-Pte-104158	Pyrenophora teres	40.74	1.00e-05	44.70
IUUC-Pyt-104466	Pyrenophora triticirepentis	40.74	9.00e-06	44.70
IUUC-Sce-106421	Saccharomyces cerevisiae	37.97	9.00e-06	43.50
IUUC-Smo-109403	Selaginella moellendorffii	65.28	1.00e-85	308.00
IUUC-Sit-110411	Setaria italica	97.69	2.00e-127	446.00
IUUC-Sly-111450	Solanum lycopersicum	76.85	5.00e-102	362.00
IUUC-Stu-112123	Solanum tuberosum	77.73	1.00e-101	361.00
IUUC-Tca-121518	Theobroma cacao	79.17	1.00e-104	370.00
IUUC-Tae-122704	Triticum aestivum	83.80	9.00e-104	368.00
IUUC-Tur-126461	Triticum urartu	69.91	4.00e-83	299.00
IUUC-Tbe-128138	Tupaia belangeri	53.57	5.00e-06	46.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence