iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	PINA	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	15507120

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	0.016	15.5	244	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 95   eegpdaglldrlpeeilveilkll.dkeellraarvcrrwq.elasqkalwktv 146
            ++  a ++ +lp ei++ il++l d+++ll+ a+v + +q ++  ++++wk++
   Q: 244  ADDESALTFFDLPREIVLLILRRLpDHNSLLETAQVHEALQdMINGEDKIWKSL 297
           45566778889*************88888************7777799**9986 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MPFIGRDWRA PGETWVRTPH TNGWERTKLR PVQISSEPIF IPQVSSSPTL VSSSSPKFIL 60
DSGSSASSVP KFGLYDSEQN SSCGSLPGSG IERCNSSSSS AEDSDSNDKD WIPHCFVKST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGTTGCTGT CAACTTTTCA ATTTTCAAAA TGCCATTCAT TGGACGTGAT TGGCGAGCTC 60
CCGGTGAAAC ATGGGTTCGG ACTCCACATA CAAATGGTTG GGAAAGAACT AAATTAAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001969--Aspartic_peptidase_AS
IPR001810--F-box_dom

PROSITE

PS00141--ASP_PROTEASE
PS50181--FBOX

Gene Ontology

GO:0004190--F:aspartic-type endopeptidase activity

KEGG

cel:CELE_DY3.6

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001986	Ailuropoda melanoleuca	27.16	5.00e-36	143.00
IUUC-Apl-004153	Anas platyrhynchos	27.78	1.00e-33	135.00
IUUC-Aca-004945	Anolis carolinensis	29.26	5.00e-30	123.00
IUUC-Aly-005534	Arabidopsis lyrata	22.71	7.70e-02	32.00
IUUC-Afu-008824	Aspergillus fumigatus	38.30	2.50e-01	29.30
IUUC-Ame-011383	Astyanax mexicanus	25.00	6.00e-35	140.00
IUUC-Bgr-012145	Blumeria graminis	28.41	7.40e-02	30.80
IUUC-Bta-013522	Bos taurus	27.62	1.00e-36	145.00
IUUC-Bdi-014435	Brachypodium distachyon	32.69	6.00e-03	33.50
IUUC-Cja-019893	Callithrix jacchus	26.65	2.00e-35	141.00
IUUC-Cfa-021053	Canis familiaris	27.37	4.00e-36	144.00
IUUC-Cpo-021330	Cavia porcellus	27.37	1.00e-35	142.00
IUUC-Csa-023160	Chlorocebus sabaeus	26.65	2.00e-35	141.00
IUUC-Cho-024976	Choloepus hoffmanni	26.97	1.00e-18	85.50
IUUC-Cin-025462	Ciona intestinalis	26.23	9.00e-08	48.90
IUUC-Csv-025908	Ciona savignyi	21.14	3.00e-19	87.80
IUUC-Dre-028818	Danio rerio	25.50	7.00e-35	139.00
IUUC-Dno-029334	Dasypus novemcinctus	27.41	9.00e-36	142.00
IUUC-Dor-030350	Dipodomys ordii	30.04	2.00e-29	122.00
IUUC-Dme-031699	Drosophila melanogaster	26.34	3.00e-25	107.00
IUUC-Ete-032333	Echinops telfairi	26.97	2.00e-18	85.10
IUUC-Eca-033813	Equus caballus	26.63	6.00e-36	143.00
IUUC-Eeu-034622	Erinaceus europaeus	27.59	8.00e-30	122.00
IUUC-Fca-035902	Felis catus	26.52	2.00e-33	135.00
IUUC-Fal-036982	Ficedula albicollis	28.03	8.00e-36	142.00
IUUC-Gmo-039533	Gadus morhua	28.57	1.00e-27	115.00
IUUC-Gga-040549	Gallus gallus	28.17	1.00e-37	149.00
IUUC-Gac-042238	Gasterosteus aculeatus	27.12	6.00e-38	149.00
IUUC-Ggo-045515	Gorilla gorilla	26.65	2.00e-35	141.00
IUUC-Hsa-046489	Homo sapiens	26.61	2.00e-36	144.00
IUUC-Itr-048038	Ictidomys tridecemlineatus	26.90	1.00e-35	142.00
IUUC-Lch-049820	Latimeria chalumnae	25.51	6.00e-36	143.00
IUUC-Loc-051732	Lepisosteus oculatus	28.04	6.00e-32	130.00
IUUC-Laf-053789	Loxodonta africana	26.60	3.00e-30	124.00
IUUC-Mcc-055119	Macaca mulatta	26.65	2.00e-35	141.00
IUUC-Meu-056262	Macropus eugenii	28.89	3.00e-11	61.20
IUUC-Mor-057130	Magnaporthe oryzae	26.26	2.00e-03	36.60
IUUC-Mga-059743	Meleagris gallopavo	27.81	3.00e-36	144.00
IUUC-Mvi-060234	Microbotryum violaceum	40.00	1.00e-01	30.00
IUUC-Mmr-061578	Microcebus murinus	26.46	1.00e-31	129.00
IUUC-Mdo-062355	Monodelphis domestica	25.89	9.00e-34	135.00
IUUC-Mmu-064306	Mus musculus	26.40	2.00e-33	135.00
IUUC-Mpu-065933	Mustela putorius furo	25.12	2.00e-33	135.00
IUUC-Mlu-067076	Myotis lucifugus	27.55	3.00e-36	144.00
IUUC-Nle-069716	Nomascus leucogenys	26.65	2.00e-35	141.00
IUUC-Opr-070514	Ochotona princeps	34.72	1.00e-08	52.00
IUUC-Ont-072007	Oreochromis niloticus	29.64	1.00e-33	135.00
IUUC-Oan-073321	Ornithorhynchus anatinus	29.78	5.00e-32	130.00
IUUC-Ocu-074320	Oryctolagus cuniculus	27.20	3.00e-35	140.00
IUUC-Ola-087193	Oryzias latipes	25.81	1.00e-36	145.00
IUUC-Oga-088558	Otolemur garnettii	26.90	7.00e-36	143.00
IUUC-Oar-090092	Ovis aries	27.62	2.00e-36	144.00
IUUC-Ptr-091443	Pan troglodytes	26.40	8.00e-35	139.00
IUUC-Pan-092053	Papio anubis	26.36	2.00e-36	145.00
IUUC-Psi-093922	Pelodiscus sinensis	27.13	3.00e-36	144.00
IUUC-Pma-094448	Petromyzon marinus	27.27	3.00e-35	141.00
IUUC-Pno-094974	Phaeosphaeria nodorum	27.59	3.00e-02	32.30
IUUC-Pfo-096873	Poecilia formosa	27.09	2.00e-37	148.00
IUUC-Pab-097940	Pongo abelii	26.94	6.00e-37	146.00
IUUC-Pca-101124	Procavia capensis	26.85	3.00e-33	134.00
IUUC-Pva-102791	Pteropus vampyrus	26.90	1.00e-35	142.00
IUUC-Pyt-104618	Pyrenophora triticirepentis	38.30	1.60e-02	32.70
IUUC-Rno-105568	Rattus norvegicus	26.60	2.00e-35	141.00
IUUC-Sce-106188	Saccharomyces cerevisiae	35.38	2.10e-01	30.00
IUUC-Sha-107281	Sarcophilus harrisii	26.99	5.00e-36	143.00
IUUC-Sja-107778	Schizosaccharomyces japonicus	28.24	5.70e-02	31.60
IUUC-Sit-109946	Setaria italica	27.40	8.00e-03	33.10
IUUC-Sar-113077	Sorex araneus	26.10	2.00e-21	95.10
IUUC-Sbi-114248	Sorghum bicolor	53.57	3.80e-01	27.70
IUUC-Ssc-115993	Sus scrofa	24.94	2.00e-29	122.00
IUUC-Tgu-116518	Taeniopygia guttata	27.72	8.00e-35	139.00
IUUC-Tru-118690	Takifugu rubripes	25.63	6.00e-35	140.00
IUUC-Tsy-119123	Tarsius syrichta	26.36	4.00e-18	84.00
IUUC-Tni-120740	Tetraodon nigroviridis	25.74	1.00e-36	145.00
IUUC-Tre-122062	Trichoderma reesei	27.78	3.00e-02	30.40
IUUC-Tvi-122521	Trichoderma virens	29.63	1.80e-02	31.20
IUUC-Tae-123499	Triticum aestivum	25.96	9.00e-03	33.50
IUUC-Tur-126126	Triticum urartu	25.96	2.90e-02	32.00
IUUC-Tme-127190	Tuber melanosporum	34.00	1.30e-01	30.00
IUUC-Tbe-127713	Tupaia belangeri	26.81	2.00e-20	91.70
IUUC-Ttr-128339	Tursiops truncatus	26.65	2.00e-35	141.00
IUUC-Vpa-130070	Vicugna pacos	33.09	8.00e-17	79.70
IUUC-Xtr-131774	Xenopus tropicalis	29.26	8.00e-31	126.00
IUUC-Xma-133649	Xiphophorus maculatus	27.65	3.00e-38	150.00
IUUC-Zma-135430	Zea mays	32.08	1.40e-02	32.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence