iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113862

Ensembl Protein ID

Sb01g014130.1

UniProt Accession

C5X187; C5X187_SORBI

Genbank Protein ID

EER90896.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G094800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g014130	Sb01g014130.1	Sb01g014130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.70e-18	65.5	148	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt......................elkn.sevalkYeDedGDlvtlksDedldkavsllaskk 74
           +vkvs++g+++++++dl+ +g++++L ka+++ +                        +++ +++ ++YeD+dGD++ l++D++++++v+      
   Q: 148  FVKVSMDGAPYLRKVDLRTYGSYQELSKALQKmFSsftigscgpqgmmneetklqadLVSGsDDYLPTYEDKDGDWM-LVGDVPWEMFVE------ 236
           79******************************622566999*************99978888***************.************...... PP
   S: 75   sllrlliqk 83
           s++rl+i+k
   Q: 237  SCKRLRIMK 245
           ********8 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAGLGFEETE LRLGLPGGND AGDAAAARKR GFEETIDLKL KLEQPAAPHL EKEEEAGAGD 60
AVAPGAVPLS SPPAASTAGA GTAMKRSPSQ SSVVTADAPP DPEKPRAPKA QAVGWPPVRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGCC TCGGGTTCGA GGAGACCGAG CTCCGGCTCG GCCTGCCCGG CGGCAACGAC 60
GCCGGGGATG CCGCGGCGGC GAGGAAGCGG GGTTTCGAGG AGACCATCGA CCTCAAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sbi:SORBI_01g008480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017218	Brassica rapa	50.94	1.00e-59	221.00
IUUC-Ogl-077429	Oryza glaberrima	58.78	2.00e-73	267.00
IUUC-Pgr-103396	Puccinia graminis	43.33	2.60e+00	27.30
IUUC-Spo-108375	Schizosaccharomyces pombe	41.94	9.90e+00	25.80
IUUC-Sit-110216	Setaria italica	75.56	2.00e-84	305.00
IUUC-Tca-121261	Theobroma cacao	56.76	8.00e-68	249.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence