iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107353

Ensembl Protein ID

ENSSHAP00000004160.1

UniProt Accession

G3VLV5; G3VLV5_SARHA

Genbank Protein ID

ENSSHAP00000004160

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01087714

Gene Name

SF3A1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000003666.1	ENSSHAT00000004201.1	ENSSHAP00000004160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	8.20e-16	57.8	703	786

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlk....v...npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           ++v+v++++++ e++l+    v   +  d+V+++K ki++++g+p+ +q+L+y+G+ ++d ++La+y++ +g +ihl +k++gg
   Q: 703  IKVQVPNMQDKtEWKLNgqvlVftlPLPDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGG 786
           68999999999999999996526668888**************************************************99875 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

LPQPGYRQLL PCSPSLSLQP PEEEASKEDS TPSKPVVGII YPPPEVRNIV DKTASFVARN 60
GPEFEARIRQ NEINNPKFNF LNPNDPYHAY YRHKVSEFKE GKAQEPSAAI PKVMQQQQQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCCCAGC CTGGCTACAG GCAGCTCCTT CCTTGCTCAC CCTCGCTGTC CTTGCAGCCC 60
CCAGAAGAAG AAGCTTCCAA GGAGGATTCT ACTCCCTCCA AACCCGTTGT GGGGATCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0016607--C:nuclear speck
GO:0005684--C:U2-type spliceosomal complex
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	34.31	2.00e-45	176.00
IUUC-Aml-002416	Ailuropoda melanoleuca	94.41	0.00e+00	1049.00
IUUC-Atr-003001	Amborella trichopoda	48.57	5.00e-65	242.00
IUUC-Apl-003584	Anas platyrhynchos	91.01	0.00e+00	890.00
IUUC-Aca-004690	Anolis carolinensis	84.26	0.00e+00	958.00
IUUC-Aly-005487	Arabidopsis lyrata	44.81	2.00e-55	210.00
IUUC-Ath-007275	Arabidopsis thaliana	44.40	5.00e-57	216.00
IUUC-Acl-008320	Aspergillus clavatus	42.86	1.00e-47	184.00
IUUC-Afl-008707	Aspergillus flavus	46.69	9.00e-58	217.00
IUUC-Afu-008786	Aspergillus fumigatus	41.11	1.00e-46	180.00
IUUC-Ani-009307	Aspergillus nidulans	44.25	1.00e-52	200.00
IUUC-Ang-009761	Aspergillus niger	46.69	2.00e-56	213.00
IUUC-Aor-010067	Aspergillus oryzae	46.69	7.00e-58	218.00
IUUC-Ate-010515	Aspergillus terreus	47.04	1.00e-57	217.00
IUUC-Ame-011842	Astyanax mexicanus	76.72	0.00e+00	936.00
IUUC-Bgr-012204	Blumeria graminis	34.87	7.00e-64	238.00
IUUC-Bta-013525	Bos taurus	95.04	0.00e+00	1050.00
IUUC-Bci-013842	Botrytis cinerea	46.43	2.00e-50	193.00
IUUC-Bdi-014436	Brachypodium distachyon	35.42	2.00e-70	260.00
IUUC-Bol-015903	Brassica oleracea	37.36	2.00e-67	250.00
IUUC-Bra-017856	Brassica rapa	36.19	6.00e-54	205.00
IUUC-Cel-018261	Caenorhabditis elegans	50.17	6.00e-79	288.00
IUUC-Cja-018989	Callithrix jacchus	94.67	0.00e+00	1038.00
IUUC-Cfa-020629	Canis familiaris	94.52	0.00e+00	1046.00
IUUC-Cpo-021759	Cavia porcellus	94.67	0.00e+00	1034.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	38.93	2.00e-22	99.80
IUUC-Csa-023750	Chlorocebus sabaeus	94.41	0.00e+00	1036.00
IUUC-Cho-024581	Choloepus hoffmanni	98.15	5.00e-121	428.00
IUUC-Cin-025640	Ciona intestinalis	54.68	2.00e-136	479.00
IUUC-Csv-025855	Ciona savignyi	53.46	9.00e-132	464.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	42.27	1.00e-45	177.00
IUUC-Cne-026952	Cryptococcus neoformans	41.81	5.00e-49	189.00
IUUC-Dre-028055	Danio rerio	78.67	0.00e+00	911.00
IUUC-Dno-029259	Dasypus novemcinctus	94.27	0.00e+00	1049.00
IUUC-Dor-031081	Dipodomys ordii	93.76	0.00e+00	1037.00
IUUC-Dse-031438	Dothistroma septosporum	39.79	7.00e-48	185.00
IUUC-Dme-031975	Drosophila melanogaster	58.95	3.00e-139	489.00
IUUC-Ete-033177	Echinops telfairi	92.07	0.00e+00	823.00
IUUC-Eca-033670	Equus caballus	94.80	0.00e+00	1051.00
IUUC-Eeu-035100	Erinaceus europaeus	87.89	0.00e+00	631.00
IUUC-Fca-036176	Felis catus	94.78	0.00e+00	1046.00
IUUC-Fal-036776	Ficedula albicollis	90.46	0.00e+00	687.00
IUUC-Fox-037706	Fusarium oxysporum	40.83	9.00e-49	187.00
IUUC-Fso-038313	Fusarium solani	42.39	5.00e-45	175.00
IUUC-Gmo-038887	Gadus morhua	77.32	0.00e+00	936.00
IUUC-Ggr-039932	Gaeumannomyces graminis	38.02	1.00e-34	140.00
IUUC-Gga-041184	Gallus gallus	89.52	0.00e+00	862.00
IUUC-Gac-042118	Gasterosteus aculeatus	79.83	0.00e+00	741.00
IUUC-Gma-042726	Glycine max	46.90	4.00e-19	90.10
IUUC-Ggo-045641	Gorilla gorilla	91.51	0.00e+00	1026.00
IUUC-Hsa-045751	Homo sapiens	94.39	0.00e+00	1033.00
IUUC-Hvu-047702	Hordeum vulgare	31.07	1.00e-27	117.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	94.94	0.00e+00	1049.00
IUUC-Kpa-049400	Komagataella pastoris	29.31	6.00e-31	128.00
IUUC-Lch-050152	Latimeria chalumnae	79.75	0.00e+00	873.00
IUUC-Lpe-051570	Leersia perrieri	35.57	9.00e-48	185.00
IUUC-Loc-051753	Lepisosteus oculatus	81.09	0.00e+00	976.00
IUUC-Lma-053219	Leptosphaeria maculans	36.58	1.00e-34	140.00
IUUC-Laf-053643	Loxodonta africana	94.67	0.00e+00	1018.00
IUUC-Mcc-055091	Macaca mulatta	94.28	0.00e+00	1036.00
IUUC-Meu-056036	Macropus eugenii	86.80	0.00e+00	805.00
IUUC-Mor-057214	Magnaporthe oryzae	37.36	7.00e-35	141.00
IUUC-Mpo-057385	Magnaporthe poae	27.70	2.00e-09	55.80
IUUC-Mtr-057954	Medicago truncatula	37.31	4.00e-78	285.00
IUUC-Mla-059020	Melampsora laricipopulina	31.01	1.00e-63	238.00
IUUC-Mga-060176	Meleagris gallopavo	90.99	0.00e+00	892.00
IUUC-Mvi-060278	Microbotryum violaceum	37.80	3.00e-52	200.00
IUUC-Mmr-061602	Microcebus murinus	94.28	0.00e+00	1060.00
IUUC-Mdo-062047	Monodelphis domestica	97.14	0.00e+00	1030.00
IUUC-Mmu-063377	Mus musculus	92.13	0.00e+00	1026.00
IUUC-Mac-065644	Musa acuminata	46.52	2.00e-60	227.00
IUUC-Mpu-066047	Mustela putorius furo	94.54	0.00e+00	1049.00
IUUC-Mlu-067039	Myotis lucifugus	94.67	0.00e+00	1016.00
IUUC-Nfi-068434	Neosartorya fischeri	45.59	4.00e-53	202.00
IUUC-Ncr-068912	Neurospora crassa	39.41	2.00e-39	156.00
IUUC-Nle-069540	Nomascus leucogenys	94.41	0.00e+00	1036.00
IUUC-Opr-071157	Ochotona princeps	94.02	0.00e+00	1022.00
IUUC-Ont-072229	Oreochromis niloticus	80.54	0.00e+00	927.00
IUUC-Oan-073616	Ornithorhynchus anatinus	97.35	8.00e-32	129.00
IUUC-Ocu-074002	Oryctolagus cuniculus	94.65	0.00e+00	1047.00
IUUC-Oba-075659	Oryza barthii	33.73	2.00e-31	130.00
IUUC-Obr-076465	Oryza brachyantha	45.73	1.00e-33	138.00
IUUC-Ogl-077461	Oryza glaberrima	37.11	5.00e-50	192.00
IUUC-Ogu-078515	Oryza glumaepatula	37.50	5.00e-50	192.00
IUUC-Oin-080201	Oryza indica	46.88	3.00e-33	137.00
IUUC-Olo-080751	Oryza longistaminata	33.73	2.00e-31	130.00
IUUC-Ome-081201	Oryza meridionalis	36.52	3.00e-71	263.00
IUUC-Oni-082951	Oryza nivara	46.88	4.00e-33	136.00
IUUC-Opu-083560	Oryza punctata	34.68	9.00e-61	228.00
IUUC-Oru-084440	Oryza rufipogon	37.11	5.00e-50	192.00
IUUC-Osa-085699	Oryza sativa	37.11	5.00e-50	192.00
IUUC-Ola-086705	Oryzias latipes	72.88	0.00e+00	897.00
IUUC-Olu-087794	Ostreococcus lucimarinus	36.75	8.00e-61	228.00
IUUC-Oga-088896	Otolemur garnettii	94.41	0.00e+00	1039.00
IUUC-Oar-090155	Ovis aries	93.48	0.00e+00	816.00
IUUC-Ptr-090754	Pan troglodytes	94.26	0.00e+00	1031.00
IUUC-Pan-092464	Papio anubis	94.41	0.00e+00	1036.00
IUUC-Psi-093166	Pelodiscus sinensis	90.06	0.00e+00	696.00
IUUC-Pma-094280	Petromyzon marinus	85.40	2.00e-127	449.00
IUUC-Pno-095106	Phaeosphaeria nodorum	37.23	2.00e-30	126.00
IUUC-Ppa-095510	Physcomitrella patens	47.62	2.00e-56	214.00
IUUC-Pfo-096212	Poecilia formosa	69.52	0.00e+00	737.00
IUUC-Pab-098482	Pongo abelii	94.41	0.00e+00	1036.00
IUUC-Pop-099479	Populus trichocarpa	44.08	4.00e-56	213.00
IUUC-Pca-100776	Procavia capensis	97.03	1.00e-73	271.00
IUUC-Ppe-101595	Prunus persica	43.52	7.00e-59	221.00
IUUC-Pva-102981	Pteropus vampyrus	93.56	0.00e+00	980.00
IUUC-Pgr-103503	Puccinia graminis	32.91	3.00e-68	253.00
IUUC-Ptt-103994	Puccinia triticina	31.64	4.00e-62	233.00
IUUC-Pte-104226	Pyrenophora teres	35.40	3.00e-36	145.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	36.24	5.00e-39	155.00
IUUC-Rno-105225	Rattus norvegicus	92.46	0.00e+00	1026.00
IUUC-Sce-106278	Saccharomyces cerevisiae	23.28	4.00e-11	61.60
IUUC-Sja-107876	Schizosaccharomyces japonicus	35.86	2.00e-61	229.00
IUUC-Spo-108266	Schizosaccharomyces pombe	41.58	2.00e-52	199.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	45.74	5.00e-54	205.00
IUUC-Smo-109675	Selaginella moellendorffii	43.93	2.00e-51	196.00
IUUC-Sit-110019	Setaria italica	33.79	7.00e-48	185.00
IUUC-Sly-111621	Solanum lycopersicum	45.65	5.00e-63	235.00
IUUC-Stu-112703	Solanum tuberosum	46.35	7.00e-64	238.00
IUUC-Sar-113166	Sorex araneus	91.19	0.00e+00	955.00
IUUC-Sbi-114746	Sorghum bicolor	35.03	2.00e-48	187.00
IUUC-Sre-115196	Sporisorium reilianum	34.82	4.00e-53	202.00
IUUC-Ssc-115573	Sus scrofa	94.91	0.00e+00	1050.00
IUUC-Tgu-117284	Taeniopygia guttata	91.02	0.00e+00	882.00
IUUC-Tru-118236	Takifugu rubripes	78.13	0.00e+00	676.00
IUUC-Tsy-119219	Tarsius syrichta	91.20	0.00e+00	923.00
IUUC-Tni-119929	Tetraodon nigroviridis	81.04	7.00e-101	361.00
IUUC-Tca-121156	Theobroma cacao	43.67	8.00e-61	228.00
IUUC-Tre-122179	Trichoderma reesei	42.24	2.00e-44	173.00
IUUC-Tvi-122326	Trichoderma virens	40.85	2.00e-47	182.00
IUUC-Tae-124733	Triticum aestivum	34.76	1.00e-67	251.00
IUUC-Tur-126352	Triticum urartu	33.94	8.00e-46	178.00
IUUC-Tme-126996	Tuber melanosporum	42.80	3.00e-51	196.00
IUUC-Tbe-127271	Tupaia belangeri	87.26	0.00e+00	902.00
IUUC-Ttr-128433	Tursiops truncatus	92.70	0.00e+00	1041.00
IUUC-Uma-129357	Ustilago maydis	30.08	1.00e-46	181.00
IUUC-Vda-130010	Verticillium dahliae	40.50	3.00e-42	166.00
IUUC-Vvi-131734	Vitis vinifera	46.64	1.00e-62	234.00
IUUC-Xtr-132013	Xenopus tropicalis	83.69	0.00e+00	946.00
IUUC-Xma-134244	Xiphophorus maculatus	70.50	0.00e+00	838.00
IUUC-Yli-134579	Yarrowia lipolytica	35.52	4.00e-31	129.00
IUUC-Zma-135716	Zea mays	36.03	4.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence