iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023602

Ensembl Protein ID

ENSCSAP00000007888.1

UniProt Accession

A0A0D9RGZ9; A0A0D9RGZ9_CHLSB

Genbank Protein ID

ENSCSAP00000007888

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01145994

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000011687.1	ENSCSAT00000009778.1	ENSCSAP00000007888.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	100.00	8.00e-178	620.00	IUUC-Hsa-046680
UBD/Other/Other	100.00	8.00e-178	620.00	IUUC-Hsa-046680
UBD/Other/Other	37.35	8.00e-52	198.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGGGCGTA CCGGCTTGGC GCGGCGGCGG CGGCGGCGGC GGCGGCGGGC TGGGAGAGCG 60
GTCGGCGGGG TACGTTCGTC GTATTGTCTG AGAGAAGCGG AGTCTGCGAG GTGGTGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

csab:103223000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	51.80	5.00e-66	244.00
IUUC-Aml-001398	Ailuropoda melanoleuca	100.00	2.00e-178	617.00
IUUC-Atr-002449	Amborella trichopoda	48.84	6.00e-56	210.00
IUUC-Apl-004065	Anas platyrhynchos	92.75	2.00e-142	498.00
IUUC-Aca-004973	Anolis carolinensis	93.16	6.00e-173	599.00
IUUC-Aly-005501	Arabidopsis lyrata	52.14	1.00e-67	249.00
IUUC-Ath-007324	Arabidopsis thaliana	52.61	1.00e-67	249.00
IUUC-Ago-007918	Ashbya gossypii	38.51	1.00e-53	203.00
IUUC-Acl-008362	Aspergillus clavatus	42.64	4.00e-67	248.00
IUUC-Afl-008690	Aspergillus flavus	54.17	2.00e-64	239.00
IUUC-Afu-008787	Aspergillus fumigatus	43.54	8.00e-66	243.00
IUUC-Ani-009385	Aspergillus nidulans	56.57	4.00e-57	215.00
IUUC-Ang-009709	Aspergillus niger	56.22	5.00e-64	238.00
IUUC-Aor-010240	Aspergillus oryzae	54.17	2.00e-64	239.00
IUUC-Ate-010551	Aspergillus terreus	56.31	1.00e-64	240.00
IUUC-Ame-011417	Astyanax mexicanus	88.96	3.00e-159	553.00
IUUC-Bgr-011986	Blumeria graminis	56.25	8.00e-62	230.00
IUUC-Bta-012559	Bos taurus	97.36	2.00e-128	451.00
IUUC-Bci-013767	Botrytis cinerea	56.08	4.00e-58	218.00
IUUC-Bdi-014336	Brachypodium distachyon	52.00	2.00e-65	242.00
IUUC-Bol-015824	Brassica oleracea	44.41	2.00e-66	245.00
IUUC-Bra-016732	Brassica rapa	44.09	2.00e-66	245.00
IUUC-Cel-018590	Caenorhabditis elegans	40.47	2.00e-49	189.00
IUUC-Cja-019487	Callithrix jacchus	99.35	1.00e-178	618.00
IUUC-Cfa-020497	Canis familiaris	99.67	1.00e-178	618.00
IUUC-Cpo-022150	Cavia porcellus	99.67	9.00e-178	615.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	50.66	3.00e-58	218.00
IUUC-Cin-025594	Ciona intestinalis	57.72	3.00e-93	334.00
IUUC-Csv-026040	Ciona savignyi	55.59	1.00e-94	339.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	48.15	6.00e-52	197.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	2.00e-39	156.00
IUUC-Cme-027323	Cyanidioschyzon merolae	33.55	3.00e-43	168.00
IUUC-Dre-027987	Danio rerio	86.69	7.00e-154	536.00
IUUC-Dor-030294	Dipodomys ordii	97.39	4.00e-174	603.00
IUUC-Dse-031411	Dothistroma septosporum	38.24	4.00e-57	214.00
IUUC-Dme-031798	Drosophila melanogaster	56.01	3.00e-93	334.00
IUUC-Ete-032432	Echinops telfairi	98.05	1.00e-175	608.00
IUUC-Eca-034427	Equus caballus	100.00	3.00e-179	620.00
IUUC-Eeu-034917	Erinaceus europaeus	70.68	2.00e-111	395.00
IUUC-Fca-035380	Felis catus	99.67	1.00e-178	618.00
IUUC-Fal-037659	Ficedula albicollis	94.04	4.00e-168	583.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	4.00e-21	94.00
IUUC-Fso-038111	Fusarium solani	35.96	2.00e-53	202.00
IUUC-Gmo-039298	Gadus morhua	86.73	1.00e-146	512.00
IUUC-Ggr-039771	Gaeumannomyces graminis	51.03	2.00e-56	212.00
IUUC-Gga-040313	Gallus gallus	94.79	5.00e-172	596.00
IUUC-Gac-042009	Gasterosteus aculeatus	85.81	1.00e-147	515.00
IUUC-Gma-043844	Glycine max	52.28	2.00e-67	249.00
IUUC-Ggo-044639	Gorilla gorilla	89.21	3.00e-173	600.00
IUUC-Hsa-046680	Homo sapiens	100.00	3.00e-179	620.00
IUUC-Hvu-047860	Hordeum vulgare	52.44	1.00e-65	243.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	100.00	2.00e-178	617.00
IUUC-Kpa-049136	Komagataella pastoris	36.57	3.00e-55	208.00
IUUC-Lch-050607	Latimeria chalumnae	88.41	8.00e-156	542.00
IUUC-Lpe-050726	Leersia perrieri	50.23	2.00e-61	229.00
IUUC-Loc-051848	Lepisosteus oculatus	89.32	3.00e-161	560.00
IUUC-Lma-053187	Leptosphaeria maculans	41.64	3.00e-65	241.00
IUUC-Laf-053569	Loxodonta africana	98.06	7.00e-175	605.00
IUUC-Mcc-055275	Macaca mulatta	99.67	2.00e-178	617.00
IUUC-Mor-056967	Magnaporthe oryzae	37.94	8.00e-57	214.00
IUUC-Mpo-057399	Magnaporthe poae	51.55	1.00e-56	213.00
IUUC-Mtr-058353	Medicago truncatula	51.30	3.00e-65	241.00
IUUC-Mla-058830	Melampsora laricipopulina	44.56	1.00e-42	167.00
IUUC-Mga-059803	Meleagris gallopavo	93.89	8.00e-144	502.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	3.00e-45	176.00
IUUC-Mmr-060573	Microcebus murinus	99.67	1.00e-178	618.00
IUUC-Mdo-062831	Monodelphis domestica	96.74	1.00e-174	605.00
IUUC-Mmu-064302	Mus musculus	98.70	5.00e-177	612.00
IUUC-Mac-064745	Musa acuminata	51.72	6.00e-66	244.00
IUUC-Mpu-065922	Mustela putorius furo	99.67	6.00e-179	619.00
IUUC-Mlu-068236	Myotis lucifugus	98.71	1.00e-176	611.00
IUUC-Nfi-068417	Neosartorya fischeri	43.54	9.00e-66	243.00
IUUC-Ncr-068747	Neurospora crassa	40.75	4.00e-54	204.00
IUUC-Nle-069948	Nomascus leucogenys	89.24	2.00e-174	604.00
IUUC-Opr-070919	Ochotona princeps	84.05	2.00e-140	491.00
IUUC-Ont-071467	Oreochromis niloticus	86.41	1.00e-152	531.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.36	2.00e-69	254.00
IUUC-Ocu-074427	Oryctolagus cuniculus	98.05	4.00e-168	583.00
IUUC-Oba-075440	Oryza barthii	51.27	3.00e-66	245.00
IUUC-Obr-076275	Oryza brachyantha	51.15	7.00e-60	224.00
IUUC-Ogl-077237	Oryza glaberrima	51.27	2.00e-66	245.00
IUUC-Ogu-078934	Oryza glumaepatula	51.27	2.00e-66	245.00
IUUC-Oin-079475	Oryza indica	51.69	7.00e-67	247.00
IUUC-Olo-080285	Oryza longistaminata	59.64	6.00e-57	213.00
IUUC-Ome-081887	Oryza meridionalis	50.64	4.00e-66	244.00
IUUC-Oni-082064	Oryza nivara	51.69	9.00e-67	246.00
IUUC-Opu-083610	Oryza punctata	50.64	6.00e-66	244.00
IUUC-Oru-084911	Oryza rufipogon	44.27	5.00e-67	247.00
IUUC-Osa-085366	Oryza sativa	51.27	3.00e-66	245.00
IUUC-Ola-086846	Oryzias latipes	76.15	9.00e-139	486.00
IUUC-Olu-087879	Ostreococcus lucimarinus	45.82	5.00e-57	214.00
IUUC-Oga-089017	Otolemur garnettii	98.38	2.00e-175	608.00
IUUC-Oar-089970	Ovis aries	94.44	1.00e-167	582.00
IUUC-Ptr-091147	Pan troglodytes	90.61	3.00e-163	566.00
IUUC-Pan-091757	Papio anubis	92.21	2.00e-159	554.00
IUUC-Psi-093931	Pelodiscus sinensis	95.11	2.00e-172	598.00
IUUC-Pno-094775	Phaeosphaeria nodorum	48.62	2.00e-59	222.00
IUUC-Ppa-095156	Physcomitrella patens	51.79	1.00e-63	236.00
IUUC-Pfo-097295	Poecilia formosa	85.53	7.00e-152	529.00
IUUC-Pab-098537	Pongo abelii	100.00	3.00e-179	620.00
IUUC-Pop-099436	Populus trichocarpa	49.60	2.00e-67	248.00
IUUC-Pca-100631	Procavia capensis	86.67	4.00e-166	577.00
IUUC-Ppe-101259	Prunus persica	50.87	1.00e-66	246.00
IUUC-Pva-102679	Pteropus vampyrus	90.97	5.00e-160	556.00
IUUC-Pgr-103475	Puccinia graminis	45.59	7.00e-45	174.00
IUUC-Ptt-104012	Puccinia triticina	38.73	2.00e-32	132.00
IUUC-Pte-104071	Pyrenophora teres	51.43	6.00e-62	231.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	51.43	6.00e-62	231.00
IUUC-Rno-104858	Rattus norvegicus	98.70	7.00e-177	612.00
IUUC-Sce-106174	Saccharomyces cerevisiae	39.02	2.00e-54	206.00
IUUC-Sha-107075	Sarcophilus harrisii	96.73	2.00e-174	604.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	44.00	1.00e-60	226.00
IUUC-Spo-108259	Schizosaccharomyces pombe	45.92	5.00e-52	197.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	39.03	1.00e-51	196.00
IUUC-Smo-109290	Selaginella moellendorffii	53.28	6.00e-66	244.00
IUUC-Sit-109992	Setaria italica	51.06	2.00e-65	242.00
IUUC-Sly-110858	Solanum lycopersicum	51.57	3.00e-63	234.00
IUUC-Stu-112129	Solanum tuberosum	51.13	7.00e-64	237.00
IUUC-Sar-113061	Sorex araneus	99.02	8.00e-177	612.00
IUUC-Sbi-114882	Sorghum bicolor	44.27	5.00e-66	244.00
IUUC-Sre-115104	Sporisorium reilianum	47.12	2.00e-44	172.00
IUUC-Ssc-115403	Sus scrofa	99.02	1.00e-177	615.00
IUUC-Tgu-117013	Taeniopygia guttata	94.44	4.00e-171	593.00
IUUC-Tru-118307	Takifugu rubripes	86.69	1.00e-148	518.00
IUUC-Tsy-119309	Tarsius syrichta	89.44	4.00e-69	254.00
IUUC-Tni-120209	Tetraodon nigroviridis	86.08	1.00e-146	512.00
IUUC-Tca-121421	Theobroma cacao	51.30	3.00e-67	248.00
IUUC-Tre-122235	Trichoderma reesei	45.88	1.00e-51	197.00
IUUC-Tvi-122421	Trichoderma virens	45.81	2.00e-52	199.00
IUUC-Tae-124587	Triticum aestivum	51.80	3.00e-66	245.00
IUUC-Tur-126353	Triticum urartu	37.50	4.00e-25	109.00
IUUC-Tme-126918	Tuber melanosporum	53.65	5.00e-59	221.00
IUUC-Ttr-129286	Tursiops truncatus	89.32	3.00e-161	560.00
IUUC-Uma-129404	Ustilago maydis	48.17	1.00e-45	177.00
IUUC-Vda-129746	Verticillium dahliae	48.47	4.00e-53	201.00
IUUC-Vpa-130648	Vicugna pacos	100.00	2.00e-24	105.00
IUUC-Vvi-131301	Vitis vinifera	52.17	2.00e-66	245.00
IUUC-Xtr-132583	Xenopus tropicalis	90.88	5.00e-164	570.00
IUUC-Xma-133129	Xiphophorus maculatus	85.85	6.00e-152	529.00
IUUC-Yli-134515	Yarrowia lipolytica	46.43	4.00e-51	195.00
IUUC-Zma-135266	Zea mays	43.53	8.00e-66	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence