iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129733

Ensembl Protein ID

EGY18973

UniProt Accession

G2XGM5; G2XGM5_VERDV

Genbank Protein ID

EGY18973.1

Protein Name

Histone demethylase JARID1A

Genbank Nucleotide ID

DS572719

Gene Name

VDAG_09307

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_09307	EGY18973	EGY18973

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.20e-10	38.0	1302	1348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C++ ++++  ++eCe C+ew+H +Clk++   ++++++k++Cp C+
   Q: 1302 VFC-ICRKVEAGM--MIECELCHEWYHGKCLKIA-RGKVKDEDKYTCPICD 1348
           79*.*******86..*******************.999999999******6 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MVSAPTIGNV AAGGNASAPT SSRASPAVGA GKTKAGQVNS NGYHPTNPQI PLSSMTSLPL 60
DLSSVERRGQ PTAAKEPMKK KNRPHGLEEA PTYCPTEEEW KDPFEYIRKI TPEAKQFGLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCTG CGCCGACCAT TGGCAATGTC GCTGCTGGAG GCAATGCAAG CGCGCCTACG 60
AGCTCGCGAG CGTCTCCAGC TGTCGGTGCC GGCAAGACGA AGGCCGGCCA GGTCAACTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008168--F:methyltransferase activity
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

KEGG

vda:VDAG_09307

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	39.11	1.00e-71	263.00
IUUC-Aml-002061	Ailuropoda melanoleuca	32.64	9.00e-95	340.00
IUUC-Atr-002595	Amborella trichopoda	35.41	3.00e-73	269.00
IUUC-Apl-003770	Anas platyrhynchos	30.34	1.00e-97	350.00
IUUC-Aca-004952	Anolis carolinensis	28.94	1.00e-99	356.00
IUUC-Aly-005868	Arabidopsis lyrata	39.02	2.00e-05	40.80
IUUC-Ath-007447	Arabidopsis thaliana	42.86	2.00e-05	40.80
IUUC-Acl-008162	Aspergillus clavatus	58.96	0.00e+00	1694.00
IUUC-Afl-008625	Aspergillus flavus	58.84	0.00e+00	1687.00
IUUC-Afu-008796	Aspergillus fumigatus	57.43	0.00e+00	1679.00
IUUC-Ani-009139	Aspergillus nidulans	57.55	0.00e+00	1652.00
IUUC-Ang-009560	Aspergillus niger	45.83	4.00e-07	48.90
IUUC-Aor-010155	Aspergillus oryzae	58.91	0.00e+00	1688.00
IUUC-Ate-010453	Aspergillus terreus	57.30	0.00e+00	1672.00
IUUC-Ame-011323	Astyanax mexicanus	28.96	8.00e-103	367.00
IUUC-Bgr-012241	Blumeria graminis	63.78	0.00e+00	1964.00
IUUC-Bta-012902	Bos taurus	32.60	4.00e-94	338.00
IUUC-Bci-013992	Botrytis cinerea	65.34	0.00e+00	2018.00
IUUC-Bdi-014050	Brachypodium distachyon	29.85	1.00e-74	274.00
IUUC-Bol-015692	Brassica oleracea	36.73	2.00e-05	40.80
IUUC-Bra-017743	Brassica rapa	36.73	1.00e-05	41.20
IUUC-Cja-018988	Callithrix jacchus	32.64	3.00e-94	338.00
IUUC-Cfa-020212	Canis familiaris	32.09	8.00e-89	320.00
IUUC-Cpo-022340	Cavia porcellus	33.64	5.00e-92	331.00
IUUC-Cre-022934	Chlamydomonas reinhardtii	38.33	1.00e-06	44.30
IUUC-Csa-023575	Chlorocebus sabaeus	32.64	2.00e-94	339.00
IUUC-Cho-024280	Choloepus hoffmanni	37.37	2.00e-82	299.00
IUUC-Cin-025321	Ciona intestinalis	27.66	4.00e-99	355.00
IUUC-Csv-026185	Ciona savignyi	28.28	3.00e-99	355.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	75.48	0.00e+00	2571.00
IUUC-Cne-026851	Cryptococcus neoformans	33.30	3.00e-139	488.00
IUUC-Cme-027118	Cyanidioschyzon merolae	28.85	1.00e-03	37.00
IUUC-Dre-027909	Danio rerio	29.18	4.00e-97	348.00
IUUC-Dno-029473	Dasypus novemcinctus	32.50	5.00e-89	321.00
IUUC-Dor-030854	Dipodomys ordii	32.03	1.00e-73	270.00
IUUC-Dse-031479	Dothistroma septosporum	54.64	0.00e+00	1603.00
IUUC-Dme-032021	Drosophila melanogaster	30.74	5.00e-99	354.00
IUUC-Ete-032760	Echinops telfairi	28.18	3.00e-60	226.00
IUUC-Eca-034370	Equus caballus	32.82	5.00e-93	334.00
IUUC-Eeu-034692	Erinaceus europaeus	32.22	2.00e-85	309.00
IUUC-Fca-035476	Felis catus	32.64	6.00e-95	341.00
IUUC-Fal-037078	Ficedula albicollis	30.71	1.00e-117	416.00
IUUC-Fox-037694	Fusarium oxysporum	62.65	0.00e+00	1721.00
IUUC-Fso-038127	Fusarium solani	65.73	0.00e+00	2206.00
IUUC-Gmo-039522	Gadus morhua	32.71	7.00e-91	327.00
IUUC-Ggr-039929	Gaeumannomyces graminis	63.49	0.00e+00	2191.00
IUUC-Gga-040802	Gallus gallus	29.85	4.00e-100	358.00
IUUC-Gac-042566	Gasterosteus aculeatus	28.64	3.00e-100	358.00
IUUC-Gma-042675	Glycine max	34.32	4.00e-69	255.00
IUUC-Ggo-044524	Gorilla gorilla	32.78	1.00e-93	336.00
IUUC-Hsa-045821	Homo sapiens	32.64	4.00e-94	338.00
IUUC-Hvu-047100	Hordeum vulgare	45.71	1.00e-06	45.10
IUUC-Itr-048297	Ictidomys tridecemlineatus	32.22	1.00e-93	337.00
IUUC-Kpa-049245	Komagataella pastoris	25.21	1.00e-46	181.00
IUUC-Lch-050517	Latimeria chalumnae	33.42	8.00e-96	343.00
IUUC-Lpe-051537	Leersia perrieri	38.95	3.00e-73	269.00
IUUC-Loc-051963	Lepisosteus oculatus	32.63	2.00e-85	310.00
IUUC-Lma-053234	Leptosphaeria maculans	33.33	4.00e-04	38.50
IUUC-Laf-053761	Loxodonta africana	29.83	3.00e-96	345.00
IUUC-Mcc-055672	Macaca mulatta	32.64	2.00e-94	339.00
IUUC-Meu-056643	Macropus eugenii	32.22	2.00e-90	326.00
IUUC-Mor-057198	Magnaporthe oryzae	65.04	0.00e+00	2222.00
IUUC-Mpo-057317	Magnaporthe poae	64.18	0.00e+00	2234.00
IUUC-Mtr-058113	Medicago truncatula	36.98	4.00e-66	245.00
IUUC-Mla-058837	Melampsora laricipopulina	39.66	3.00e-08	51.20
IUUC-Mga-059358	Meleagris gallopavo	30.15	2.00e-100	358.00
IUUC-Mvi-060256	Microbotryum violaceum	35.42	9.00e-06	43.90
IUUC-Mmr-060968	Microcebus murinus	29.41	4.00e-104	372.00
IUUC-Mdo-061957	Monodelphis domestica	29.36	2.00e-132	466.00
IUUC-Mmu-063614	Mus musculus	32.64	6.00e-94	338.00
IUUC-Mac-064462	Musa acuminata	42.86	2.00e-06	44.30
IUUC-Mpu-066349	Mustela putorius furo	32.64	3.00e-94	338.00
IUUC-Mlu-067366	Myotis lucifugus	30.36	2.00e-120	426.00
IUUC-Nfi-068430	Neosartorya fischeri	59.32	0.00e+00	1703.00
IUUC-Ncr-068763	Neurospora crassa	68.66	0.00e+00	2154.00
IUUC-Nle-069256	Nomascus leucogenys	29.43	2.00e-121	429.00
IUUC-Opr-071002	Ochotona princeps	56.52	2.00e-69	256.00
IUUC-Ont-072471	Oreochromis niloticus	28.59	3.00e-97	348.00
IUUC-Oan-073568	Ornithorhynchus anatinus	30.13	5.00e-97	348.00
IUUC-Ocu-074164	Oryctolagus cuniculus	32.45	6.00e-94	338.00
IUUC-Oba-075388	Oryza barthii	33.16	4.00e-58	219.00
IUUC-Obr-076296	Oryza brachyantha	31.40	1.00e-62	234.00
IUUC-Ogl-077422	Oryza glaberrima	45.71	1.00e-06	44.70
IUUC-Ogu-079040	Oryza glumaepatula	33.42	6.00e-58	218.00
IUUC-Oin-079801	Oryza indica	45.71	1.00e-06	45.10
IUUC-Olo-080963	Oryza longistaminata	48.48	4.00e-07	46.20
IUUC-Ome-081764	Oryza meridionalis	36.76	1.00e-71	263.00
IUUC-Oni-083012	Oryza nivara	33.16	4.00e-58	219.00
IUUC-Opu-083164	Oryza punctata	43.68	3.00e-70	259.00
IUUC-Oru-084630	Oryza rufipogon	33.16	4.00e-58	218.00
IUUC-Osa-086138	Oryza sativa	48.48	1.00e-06	45.10
IUUC-Ola-086448	Oryzias latipes	31.25	2.00e-128	452.00
IUUC-Olu-087633	Ostreococcus lucimarinus	28.57	2.00e-05	42.40
IUUC-Oga-088350	Otolemur garnettii	32.64	2.00e-94	339.00
IUUC-Oar-090045	Ovis aries	32.46	8.00e-94	337.00
IUUC-Ptr-090816	Pan troglodytes	30.21	3.00e-129	454.00
IUUC-Pan-092094	Papio anubis	32.64	5.00e-94	338.00
IUUC-Psi-093918	Pelodiscus sinensis	30.50	1.00e-98	353.00
IUUC-Pma-094137	Petromyzon marinus	38.31	7.00e-88	317.00
IUUC-Pno-094879	Phaeosphaeria nodorum	54.48	0.00e+00	1615.00
IUUC-Ppa-095946	Physcomitrella patens	35.42	1.00e-07	47.40
IUUC-Pfo-096645	Poecilia formosa	29.57	1.00e-124	439.00
IUUC-Pab-098576	Pongo abelii	32.64	2.00e-94	339.00
IUUC-Pop-099078	Populus trichocarpa	48.48	6.00e-07	44.30
IUUC-Pca-100446	Procavia capensis	39.69	2.00e-84	306.00
IUUC-Ppe-101504	Prunus persica	38.29	1.00e-71	263.00
IUUC-Pva-103035	Pteropus vampyrus	31.71	2.00e-89	323.00
IUUC-Pgr-103434	Puccinia graminis	39.44	7.00e-39	152.00
IUUC-Ptt-104009	Puccinia triticina	38.16	3.00e-09	54.70
IUUC-Pte-104195	Pyrenophora teres	58.05	0.00e+00	1645.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	57.52	0.00e+00	1629.00
IUUC-Rno-105359	Rattus norvegicus	27.82	2.00e-125	442.00
IUUC-Sce-106207	Saccharomyces cerevisiae	38.94	3.00e-62	231.00
IUUC-Sha-107506	Sarcophilus harrisii	48.82	8.00e-82	297.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	29.08	1.00e-130	459.00
IUUC-Spo-108283	Schizosaccharomyces pombe	30.85	2.00e-143	502.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	61.76	0.00e+00	2063.00
IUUC-Sit-110534	Setaria italica	35.82	6.00e-76	278.00
IUUC-Sly-111298	Solanum lycopersicum	35.71	3.00e-74	272.00
IUUC-Stu-111932	Solanum tuberosum	45.71	1.00e-06	45.10
IUUC-Sar-113052	Sorex araneus	32.14	2.00e-92	333.00
IUUC-Sre-115161	Sporisorium reilianum	35.55	3.00e-152	531.00
IUUC-Ssc-116354	Sus scrofa	29.11	1.00e-93	337.00
IUUC-Tgu-117452	Taeniopygia guttata	30.64	6.00e-95	341.00
IUUC-Tru-118604	Takifugu rubripes	29.19	5.00e-108	384.00
IUUC-Tsy-119271	Tarsius syrichta	29.77	2.00e-91	329.00
IUUC-Tni-120779	Tetraodon nigroviridis	28.82	8.00e-104	370.00
IUUC-Tca-121478	Theobroma cacao	36.47	1.00e-72	267.00
IUUC-Tre-122213	Trichoderma reesei	64.41	0.00e+00	1896.00
IUUC-Tvi-122263	Trichoderma virens	62.81	0.00e+00	2082.00
IUUC-Tae-125894	Triticum aestivum	34.97	5.00e-72	265.00
IUUC-Tur-126632	Triticum urartu	33.81	3.00e-72	265.00
IUUC-Tme-127087	Tuber melanosporum	56.77	0.00e+00	1600.00
IUUC-Tbe-128040	Tupaia belangeri	39.69	6.00e-84	304.00
IUUC-Ttr-129242	Tursiops truncatus	32.92	2.00e-93	335.00
IUUC-Uma-129590	Ustilago maydis	32.93	0.00e+00	672.00
IUUC-Vpa-130433	Vicugna pacos	39.69	2.00e-84	305.00
IUUC-Vvi-131071	Vitis vinifera	39.94	4.00e-67	248.00
IUUC-Xtr-132324	Xenopus tropicalis	29.10	4.00e-94	338.00
IUUC-Xma-134315	Xiphophorus maculatus	28.10	2.00e-124	439.00
IUUC-Zma-135829	Zea mays	35.02	6.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence