iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121514

Ensembl Protein ID

EOY33067

UniProt Accession

A0A061GUH7; A0A061GUH7_THECC

Genbank Protein ID

EOY33067.1; EOY33068.1; EOY33069.1

Protein Name

General transcription factor II H2 isoform 1

Genbank Nucleotide ID

CM001887; CM001887; CM001887

Gene Name

TCM_041075

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_041075	EOY33067	EOY33067

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	41.31	5.00e-81	296.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNNGGARRMN GGGEEDDDED YVNGDLDAWE RTYTDERSWE SLQEDESGLL RPIDNKALYH 60
SQYRRRLRSL SSTATAARIQ KGLIRYLYLV IDLSRAASET DFRPSRIVVI AKHVEAFIRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTTTATTA AAAGTAAGTA AAAACCTAAA TTATTATAAG CAGTTAAATA CATGAATTGA 60
CACTATACTT TTGATTCATT TGAGGTCCTC CATTTCAAGT TTCTGCAAAT CCCAGGTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A

PROSITE

PS50234--VWFA

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	71.73	4.00e-118	417.00
IUUC-Aml-002041	Ailuropoda melanoleuca	43.15	2.00e-83	301.00
IUUC-Atr-003056	Amborella trichopoda	71.60	7.00e-140	489.00
IUUC-Apl-003464	Anas platyrhynchos	42.69	6.00e-76	276.00
IUUC-Aca-004745	Anolis carolinensis	43.34	8.00e-82	296.00
IUUC-Aly-005559	Arabidopsis lyrata	80.15	2.00e-176	610.00
IUUC-Ath-007556	Arabidopsis thaliana	79.90	2.00e-175	607.00
IUUC-Ago-007851	Ashbya gossypii	42.04	5.00e-82	297.00
IUUC-Acl-008100	Aspergillus clavatus	40.10	3.00e-81	295.00
IUUC-Afl-008649	Aspergillus flavus	41.18	2.00e-12	62.40
IUUC-Afu-009066	Aspergillus fumigatus	39.85	3.00e-83	301.00
IUUC-Ani-009372	Aspergillus nidulans	39.51	2.00e-78	285.00
IUUC-Ang-009726	Aspergillus niger	39.26	2.00e-84	305.00
IUUC-Aor-010135	Aspergillus oryzae	39.16	8.00e-80	290.00
IUUC-Ate-010399	Aspergillus terreus	35.37	4.00e-22	97.10
IUUC-Ame-011618	Astyanax mexicanus	43.04	2.00e-91	328.00
IUUC-Bgr-012154	Blumeria graminis	38.61	5.00e-76	277.00
IUUC-Bta-012353	Bos taurus	43.15	8.00e-87	313.00
IUUC-Bci-013932	Botrytis cinerea	39.01	4.00e-80	291.00
IUUC-Bdi-014391	Brachypodium distachyon	77.63	2.00e-162	564.00
IUUC-Bol-015128	Brassica oleracea	79.64	2.00e-179	621.00
IUUC-Bra-017932	Brassica rapa	79.90	4.00e-180	623.00
IUUC-Cel-018649	Caenorhabditis elegans	39.49	3.00e-69	254.00
IUUC-Cja-018776	Callithrix jacchus	42.89	5.00e-83	300.00
IUUC-Cfa-020584	Canis familiaris	43.40	2.00e-84	305.00
IUUC-Cpo-021300	Cavia porcellus	43.40	9.00e-84	303.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	49.87	1.00e-94	339.00
IUUC-Csa-024092	Chlorocebus sabaeus	43.15	3.00e-83	301.00
IUUC-Cho-024919	Choloepus hoffmanni	42.65	1.00e-40	158.00
IUUC-Cin-025386	Ciona intestinalis	41.52	1.00e-86	312.00
IUUC-Csv-026295	Ciona savignyi	40.30	1.00e-82	298.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	38.17	4.00e-73	268.00
IUUC-Cne-026956	Cryptococcus neoformans	36.97	1.00e-77	283.00
IUUC-Cme-027150	Cyanidioschyzon merolae	33.04	1.00e-55	209.00
IUUC-Dre-027962	Danio rerio	43.80	5.00e-93	333.00
IUUC-Dno-029979	Dasypus novemcinctus	44.51	4.00e-73	267.00
IUUC-Dse-031405	Dothistroma septosporum	41.67	4.00e-78	284.00
IUUC-Dme-031710	Drosophila melanogaster	40.45	5.00e-85	307.00
IUUC-Ete-032631	Echinops telfairi	40.86	4.00e-76	277.00
IUUC-Eca-034054	Equus caballus	43.91	4.00e-85	307.00
IUUC-Fca-035724	Felis catus	41.62	4.00e-80	290.00
IUUC-Fal-036987	Ficedula albicollis	43.65	3.00e-92	331.00
IUUC-Fox-037692	Fusarium oxysporum	40.77	1.00e-82	299.00
IUUC-Fso-038442	Fusarium solani	42.65	2.00e-84	305.00
IUUC-Gmo-039273	Gadus morhua	45.18	2.00e-94	338.00
IUUC-Ggr-040009	Gaeumannomyces graminis	40.05	2.00e-65	242.00
IUUC-Gga-041089	Gallus gallus	42.64	5.00e-91	327.00
IUUC-Gac-041978	Gasterosteus aculeatus	43.65	9.00e-89	319.00
IUUC-Gma-043371	Glycine max	81.79	0.00e+00	663.00
IUUC-Hsa-046001	Homo sapiens	43.15	4.00e-83	300.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	43.65	2.00e-90	325.00
IUUC-Kpa-049235	Komagataella pastoris	40.05	4.00e-77	281.00
IUUC-Lch-049926	Latimeria chalumnae	43.15	3.00e-86	311.00
IUUC-Lpe-051352	Leersia perrieri	75.96	3.00e-157	547.00
IUUC-Loc-051987	Lepisosteus oculatus	43.80	6.00e-91	327.00
IUUC-Lma-053171	Leptosphaeria maculans	35.03	7.00e-66	244.00
IUUC-Laf-054372	Loxodonta africana	43.15	4.00e-87	313.00
IUUC-Mcc-055108	Macaca mulatta	43.15	3.00e-83	301.00
IUUC-Mor-056990	Magnaporthe oryzae	38.03	2.00e-78	285.00
IUUC-Mtr-058401	Medicago truncatula	82.19	0.00e+00	662.00
IUUC-Mla-059186	Melampsora laricipopulina	40.81	9.00e-89	319.00
IUUC-Mvi-060262	Microbotryum violaceum	42.01	4.00e-90	324.00
IUUC-Mmr-061688	Microcebus murinus	38.86	2.00e-70	258.00
IUUC-Mdo-062154	Monodelphis domestica	43.15	4.00e-87	314.00
IUUC-Mmu-064232	Mus musculus	42.53	2.00e-81	295.00
IUUC-Mac-065091	Musa acuminata	75.56	2.00e-168	584.00
IUUC-Mpu-066747	Mustela putorius furo	39.34	5.00e-69	254.00
IUUC-Mlu-067799	Myotis lucifugus	40.82	2.00e-70	258.00
IUUC-Nfi-068371	Neosartorya fischeri	40.00	8.00e-15	72.00
IUUC-Ncr-068704	Neurospora crassa	39.30	2.00e-80	291.00
IUUC-Nle-069054	Nomascus leucogenys	42.89	2.00e-82	298.00
IUUC-Ont-071624	Oreochromis niloticus	45.18	5.00e-92	330.00
IUUC-Oan-072898	Ornithorhynchus anatinus	42.13	3.00e-86	310.00
IUUC-Ocu-074289	Oryctolagus cuniculus	41.42	3.00e-64	238.00
IUUC-Oba-075985	Oryza barthii	72.18	3.00e-155	540.00
IUUC-Obr-076887	Oryza brachyantha	75.96	4.00e-161	560.00
IUUC-Ogl-077823	Oryza glaberrima	72.18	3.00e-155	540.00
IUUC-Ogu-078412	Oryza glumaepatula	74.65	3.00e-140	491.00
IUUC-Oin-079569	Oryza indica	75.77	9.00e-116	409.00
IUUC-Olo-080249	Oryza longistaminata	76.63	1.00e-115	409.00
IUUC-Ome-081240	Oryza meridionalis	74.37	3.00e-139	488.00
IUUC-Oni-082152	Oryza nivara	76.00	2.00e-138	485.00
IUUC-Opu-084011	Oryza punctata	75.97	4.00e-155	540.00
IUUC-Oru-084719	Oryza rufipogon	74.65	1.00e-144	505.00
IUUC-Osa-085286	Oryza sativa	74.94	4.00e-155	540.00
IUUC-Ola-086525	Oryzias latipes	41.62	7.00e-78	283.00
IUUC-Olu-087876	Ostreococcus lucimarinus	45.80	2.00e-87	315.00
IUUC-Oga-088125	Otolemur garnettii	42.64	3.00e-85	307.00
IUUC-Oar-089701	Ovis aries	43.15	2.00e-86	311.00
IUUC-Ptr-091218	Pan troglodytes	42.89	4.00e-83	300.00
IUUC-Pan-091755	Papio anubis	43.15	3.00e-83	301.00
IUUC-Psi-094061	Pelodiscus sinensis	43.15	6.00e-89	320.00
IUUC-Pma-094430	Petromyzon marinus	42.86	6.00e-59	219.00
IUUC-Pno-094900	Phaeosphaeria nodorum	30.56	8.00e-39	154.00
IUUC-Ppa-095895	Physcomitrella patens	61.44	2.00e-151	527.00
IUUC-Pfo-096297	Poecilia formosa	45.85	3.00e-61	227.00
IUUC-Pab-097717	Pongo abelii	43.15	3.00e-83	301.00
IUUC-Pop-098938	Populus trichocarpa	83.64	0.00e+00	644.00
IUUC-Pca-100389	Procavia capensis	40.75	4.00e-69	254.00
IUUC-Ppe-102045	Prunus persica	81.29	0.00e+00	639.00
IUUC-Pva-102357	Pteropus vampyrus	48.79	6.00e-42	162.00
IUUC-Pgr-103399	Puccinia graminis	42.42	2.00e-89	322.00
IUUC-Ptt-103872	Puccinia triticina	42.89	3.00e-90	324.00
IUUC-Pte-104092	Pyrenophora teres	38.68	2.00e-63	236.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	39.31	3.00e-64	238.00
IUUC-Rno-105515	Rattus norvegicus	43.04	4.00e-86	310.00
IUUC-Sce-106434	Saccharomyces cerevisiae	42.07	3.00e-83	301.00
IUUC-Sha-106808	Sarcophilus harrisii	43.15	4.00e-86	310.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	41.01	9.00e-78	283.00
IUUC-Spo-108044	Schizosaccharomyces pombe	41.98	3.00e-88	317.00
IUUC-Smo-109581	Selaginella moellendorffii	57.07	3.00e-135	473.00
IUUC-Sit-110704	Setaria italica	76.79	4.00e-162	563.00
IUUC-Sly-110990	Solanum lycopersicum	81.03	8.00e-145	505.00
IUUC-Stu-112542	Solanum tuberosum	77.48	1.00e-95	341.00
IUUC-Sar-113766	Sorex araneus	42.11	1.00e-70	258.00
IUUC-Sbi-114016	Sorghum bicolor	78.63	1.00e-163	568.00
IUUC-Sre-115099	Sporisorium reilianum	38.30	2.00e-81	295.00
IUUC-Ssc-115277	Sus scrofa	42.89	4.00e-81	294.00
IUUC-Tgu-117343	Taeniopygia guttata	43.40	3.00e-91	327.00
IUUC-Tru-118397	Takifugu rubripes	43.65	7.00e-88	316.00
IUUC-Tni-120272	Tetraodon nigroviridis	43.69	8.00e-87	313.00
IUUC-Tre-121990	Trichoderma reesei	40.05	9.00e-80	290.00
IUUC-Tvi-122504	Trichoderma virens	42.11	2.00e-76	278.00
IUUC-Tae-123153	Triticum aestivum	77.49	3.00e-161	560.00
IUUC-Tur-126693	Triticum urartu	81.93	2.00e-123	434.00
IUUC-Tme-127011	Tuber melanosporum	41.09	3.00e-83	301.00
IUUC-Tbe-127939	Tupaia belangeri	42.89	5.00e-82	297.00
IUUC-Ttr-128889	Tursiops truncatus	37.56	2.00e-69	255.00
IUUC-Uma-129450	Ustilago maydis	38.88	3.00e-83	301.00
IUUC-Vda-129919	Verticillium dahliae	38.26	1.00e-71	263.00
IUUC-Vvi-130928	Vitis vinifera	85.86	0.00e+00	670.00
IUUC-Xtr-131891	Xenopus tropicalis	38.35	5.00e-76	277.00
IUUC-Xma-133260	Xiphophorus maculatus	45.06	2.00e-60	224.00
IUUC-Yli-134578	Yarrowia lipolytica	41.63	2.00e-79	289.00
IUUC-Zma-135427	Zea mays	78.06	4.00e-162	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence