iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111906

Ensembl Protein ID

Solyc12g088740.1.1

UniProt Accession

K4DGU5; K4DGU5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g088740.1	Solyc12g088740.1.1	Solyc12g088740.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-08	34.9	646	687

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   dg+ +l CgH fh+dC+++w       +++ +CP+C+
   Q: 646  CCICREEYsnGDGLGTLECGHDFHTDCIKQW------LMQKNLCPVCK 687
           ********665569999**************......9*********7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MQGQQNTVGS LQETLGFNHG STPSEGGVDQ QICWSNLQNS AQNHLPDYMV SSNATDIPFF 60
NPMSQERQNV TRGSLGESSS SIAPNSASWS EQKADHGWSS AMTTYNGPSL ICNEQQCGSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGGGC AACAGAATAC CGTTGGTTCG CTCCAAGAAA CTTTAGGTTT TAATCATGGT 60
TCGACGCCTA GTGAAGGTGG TGTAGATCAA CAGATATGTT GGAGTAATTT GCAAAATTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101262398

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002953	Amborella trichopoda	59.09	4.00e-41	161.00
IUUC-Lpe-051474	Leersia perrieri	30.63	4.00e-52	198.00
IUUC-Oba-075898	Oryza barthii	34.42	4.00e-51	195.00
IUUC-Ogl-077587	Oryza glaberrima	34.42	4.00e-51	195.00
IUUC-Ogu-078729	Oryza glumaepatula	34.73	4.00e-52	198.00
IUUC-Olo-080490	Oryza longistaminata	34.61	1.00e-51	197.00
IUUC-Oru-085229	Oryza rufipogon	34.42	4.00e-51	195.00
IUUC-Osa-085404	Oryza sativa	34.42	4.00e-51	195.00
IUUC-Spo-108234	Schizosaccharomyces pombe	29.13	2.00e-08	54.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence