iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023201

Ensembl Protein ID

ENSCSAP00000007740.1

UniProt Accession

A0A0D9RGK1; A0A0D9RGK1_CHLSB

Genbank Protein ID

ENSCSAP00000007740

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01076088

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000011538.1	ENSCSAT00000009628.1	ENSCSAP00000007740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-09	36.8	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MLLSIGMLML SATQVYTILT VQLFAFLNLL PVEADILAYN FENASQTFDD LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI VPPPVKDNSS GAFIVLIRRL DCNFDIKVLN AQRAGYKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGAGGCAT GTGGGGCGGG ACTTCCGCTT CGCCTTGGTG TTGTCGTCCC TGCTGCTACT 60
CCGGGCTGTG GGGGTCGGTG CGGATATTCA GTCATGAAGT CAGGGTAGGG ACTTCTCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0008270--F:zinc ion binding

KEGG

csab:103241489

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	27.68	6.00e-18	85.90
IUUC-Aml-001909	Ailuropoda melanoleuca	97.11	0.00e+00	644.00
IUUC-Atr-003055	Amborella trichopoda	31.45	7.00e-32	131.00
IUUC-Apl-004022	Anas platyrhynchos	91.08	1.00e-173	602.00
IUUC-Aca-004641	Anolis carolinensis	87.24	5.00e-168	583.00
IUUC-Aly-006519	Arabidopsis lyrata	32.28	6.00e-32	131.00
IUUC-Ani-009169	Aspergillus nidulans	37.84	7.00e-13	68.60
IUUC-Ame-010635	Astyanax mexicanus	72.22	2.00e-140	491.00
IUUC-Bgr-012131	Blumeria graminis	50.00	2.00e-12	68.20
IUUC-Bta-012593	Bos taurus	97.64	0.00e+00	690.00
IUUC-Bci-013936	Botrytis cinerea	35.14	5.00e-13	69.30
IUUC-Bdi-014479	Brachypodium distachyon	32.02	9.00e-28	117.00
IUUC-Bol-015396	Brassica oleracea	33.33	2.00e-22	99.80
IUUC-Bra-017689	Brassica rapa	32.74	6.00e-33	135.00
IUUC-Cel-018181	Caenorhabditis elegans	32.16	7.00e-29	121.00
IUUC-Cja-019353	Callithrix jacchus	98.95	0.00e+00	651.00
IUUC-Cfa-020234	Canis familiaris	97.38	0.00e+00	645.00
IUUC-Cpo-021602	Cavia porcellus	94.75	6.00e-158	550.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	61.20
IUUC-Cho-024954	Choloepus hoffmanni	81.63	1.00e-148	519.00
IUUC-Cin-025554	Ciona intestinalis	42.32	3.00e-61	228.00
IUUC-Csv-025959	Ciona savignyi	44.06	9.00e-52	197.00
IUUC-Dre-028744	Danio rerio	77.85	5.00e-137	480.00
IUUC-Dno-029675	Dasypus novemcinctus	96.06	0.00e+00	635.00
IUUC-Dor-030791	Dipodomys ordii	78.22	2.00e-135	475.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	68.20
IUUC-Dme-031765	Drosophila melanogaster	39.72	1.00e-50	194.00
IUUC-Ete-032577	Echinops telfairi	85.22	2.00e-138	484.00
IUUC-Eca-034148	Equus caballus	96.06	0.00e+00	637.00
IUUC-Eeu-034552	Erinaceus europaeus	94.49	2.00e-177	614.00
IUUC-Fca-036021	Felis catus	97.11	0.00e+00	641.00
IUUC-Fal-037621	Ficedula albicollis	90.29	3.00e-171	594.00
IUUC-Gmo-039485	Gadus morhua	78.05	1.00e-134	472.00
IUUC-Gga-041166	Gallus gallus	91.34	6.00e-175	606.00
IUUC-Gac-042124	Gasterosteus aculeatus	76.25	2.00e-129	455.00
IUUC-Ggo-045344	Gorilla gorilla	99.74	0.00e+00	656.00
IUUC-Hsa-045960	Homo sapiens	99.74	0.00e+00	656.00
IUUC-Hvu-047136	Hordeum vulgare	34.52	6.00e-29	122.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	95.80	0.00e+00	636.00
IUUC-Lch-050635	Latimeria chalumnae	82.19	9.00e-135	473.00
IUUC-Lpe-051192	Leersia perrieri	34.78	2.00e-29	123.00
IUUC-Loc-052869	Lepisosteus oculatus	79.51	3.00e-141	494.00
IUUC-Laf-054477	Loxodonta africana	94.75	0.00e+00	634.00
IUUC-Mcc-055232	Macaca mulatta	100.00	0.00e+00	657.00
IUUC-Meu-056237	Macropus eugenii	82.72	4.00e-117	413.00
IUUC-Mpo-057522	Magnaporthe poae	44.44	3.00e-13	69.70
IUUC-Mtr-058129	Medicago truncatula	32.68	3.00e-28	119.00
IUUC-Mla-059171	Melampsora laricipopulina	42.59	2.00e-10	60.80
IUUC-Mga-059780	Meleagris gallopavo	91.34	1.00e-174	605.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	5.00e-12	66.60
IUUC-Mmr-061384	Microcebus murinus	97.03	6.00e-180	623.00
IUUC-Mdo-062781	Monodelphis domestica	92.93	2.00e-180	624.00
IUUC-Mmu-063727	Mus musculus	93.18	4.00e-172	597.00
IUUC-Mac-065216	Musa acuminata	34.38	6.00e-30	125.00
IUUC-Mpu-066497	Mustela putorius furo	97.64	0.00e+00	645.00
IUUC-Mlu-067654	Myotis lucifugus	95.28	1.00e-114	405.00
IUUC-Nle-069368	Nomascus leucogenys	99.74	0.00e+00	656.00
IUUC-Opr-070934	Ochotona princeps	68.24	1.00e-111	396.00
IUUC-Ont-071868	Oreochromis niloticus	75.55	1.00e-128	452.00
IUUC-Oan-072733	Ornithorhynchus anatinus	87.19	5.00e-105	373.00
IUUC-Ocu-074083	Oryctolagus cuniculus	96.33	0.00e+00	639.00
IUUC-Oba-075841	Oryza barthii	33.33	2.00e-27	116.00
IUUC-Obr-076703	Oryza brachyantha	35.57	4.00e-30	125.00
IUUC-Ogl-077861	Oryza glaberrima	35.57	3.00e-30	126.00
IUUC-Ogu-078205	Oryza glumaepatula	34.78	3.00e-28	119.00
IUUC-Oin-080138	Oryza indica	32.67	5.00e-28	119.00
IUUC-Olo-081024	Oryza longistaminata	35.18	3.00e-29	124.00
IUUC-Ome-081844	Oryza meridionalis	35.57	4.00e-30	125.00
IUUC-Oni-082382	Oryza nivara	32.81	7.00e-30	125.00
IUUC-Opu-083162	Oryza punctata	36.36	2.00e-30	126.00
IUUC-Oru-085122	Oryza rufipogon	33.23	3.00e-28	119.00
IUUC-Osa-086175	Oryza sativa	35.57	2.00e-30	126.00
IUUC-Ola-086440	Oryzias latipes	74.34	1.00e-116	412.00
IUUC-Oga-088291	Otolemur garnettii	92.18	1.00e-168	585.00
IUUC-Oar-089911	Ovis aries	97.38	0.00e+00	689.00
IUUC-Ptr-091166	Pan troglodytes	99.74	0.00e+00	656.00
IUUC-Pan-092154	Papio anubis	100.00	0.00e+00	657.00
IUUC-Psi-093062	Pelodiscus sinensis	91.60	9.00e-171	592.00
IUUC-Pma-094545	Petromyzon marinus	73.21	7.00e-26	107.00
IUUC-Ppa-095928	Physcomitrella patens	34.47	4.00e-31	128.00
IUUC-Pfo-097232	Poecilia formosa	77.74	6.00e-133	466.00
IUUC-Pab-097909	Pongo abelii	99.48	0.00e+00	657.00
IUUC-Pop-099688	Populus trichocarpa	31.70	2.00e-22	99.80
IUUC-Pca-100724	Procavia capensis	79.13	3.00e-138	484.00
IUUC-Ppe-101605	Prunus persica	31.05	1.00e-27	116.00
IUUC-Pva-102624	Pteropus vampyrus	90.81	5.00e-165	573.00
IUUC-Pgr-103420	Puccinia graminis	55.32	3.00e-12	67.80
IUUC-Ptt-103943	Puccinia triticina	44.44	8.00e-11	62.00
IUUC-Rno-105109	Rattus norvegicus	91.34	2.00e-164	571.00
IUUC-Sha-107563	Sarcophilus harrisii	92.67	8.00e-176	609.00
IUUC-Spo-108083	Schizosaccharomyces pombe	26.52	9.00e-15	74.30
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	7.00e-13	68.20
IUUC-Smo-109274	Selaginella moellendorffii	36.08	3.00e-32	132.00
IUUC-Sit-110628	Setaria italica	33.55	1.00e-31	130.00
IUUC-Sly-110842	Solanum lycopersicum	29.39	4.00e-28	119.00
IUUC-Sre-114989	Sporisorium reilianum	43.14	1.00e-12	68.90
IUUC-Ssc-116043	Sus scrofa	97.38	0.00e+00	641.00
IUUC-Tgu-116908	Taeniopygia guttata	90.05	7.00e-172	596.00
IUUC-Tru-118219	Takifugu rubripes	75.79	4.00e-132	464.00
IUUC-Tsy-119333	Tarsius syrichta	97.64	0.00e+00	637.00
IUUC-Tni-120332	Tetraodon nigroviridis	71.49	9.00e-89	319.00
IUUC-Tca-121333	Theobroma cacao	33.08	1.00e-27	117.00
IUUC-Tvi-122495	Trichoderma virens	41.67	2.00e-12	67.00
IUUC-Tae-125320	Triticum aestivum	31.16	2.00e-29	122.00
IUUC-Tur-126455	Triticum urartu	32.61	1.00e-26	114.00
IUUC-Tbe-127859	Tupaia belangeri	85.53	2.00e-166	578.00
IUUC-Ttr-129219	Tursiops truncatus	86.88	7.00e-157	546.00
IUUC-Uma-129559	Ustilago maydis	52.08	2.00e-12	67.80
IUUC-Vda-129899	Verticillium dahliae	43.40	7.00e-13	68.60
IUUC-Vpa-130314	Vicugna pacos	94.75	3.00e-175	607.00
IUUC-Vvi-131355	Vitis vinifera	33.46	5.00e-29	122.00
IUUC-Xtr-132114	Xenopus tropicalis	75.56	2.00e-131	461.00
IUUC-Xma-133474	Xiphophorus maculatus	77.74	4.00e-133	467.00
IUUC-Yli-134442	Yarrowia lipolytica	44.68	3.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence