iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-131927

Ensembl Protein ID

ENSXETP00000020202.3

UniProt Accession

F7E080; F7E080_XENTR

Genbank Protein ID

ENSXETP00000020202

Protein Name

DEXD/H-box helicase 58

Genbank Nucleotide ID

AAMC01048639

Gene Name

ddx58

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000009200.3	ENSXETT00000020202.3	ENSXETP00000020202.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/CARD	1.20e-15	58.0	9	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/CARD

   S: 9    lstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktL..vqkegWfrefl 73
           l++ +d++  +L +t+v+d ++s ++ + + e+i a+   +g+ qaa  ++k L  + ++gW ++fl
   Q: 9    LKLYSDYITGILRPTYVID-CMSTWFSTDVIEKIKAEE-SNGPTQAASFFIKHLleLEERGWYQGFL 73
           78899**************.*************99887.99**********************9996 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSQEDKERLK LYSDYITGIL RPTYVIDCMS TWFSTDVIEK IKAEESNGPT QAASFFIKHL 60
LELEERGWYQ GFLDVLEATG YTGLCQALTM SDFHHIEALD HPKRLLKTIH STVKNNITPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCAAG AGGACAAAGA AAGATTAAAA CTGTATAGTG ATTACATCAC AGGGATTCTG 60
AGACCCACCT ATGTTATTGA CTGTATGTCC ACTTGGTTCT CAACAGGTAA GTCCTCTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR031964--CARD_dom
IPR011545--DEAD/DEAH_box_helicase_dom
IPR011029--DEATH-like_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00270--DEAD
PF00271--Helicase_C
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0003676--F:nucleic acid binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001898	Ailuropoda melanoleuca	51.51	0.00e+00	883.00
IUUC-Apl-003966	Anas platyrhynchos	50.00	0.00e+00	840.00
IUUC-Aca-004499	Anolis carolinensis	44.60	0.00e+00	739.00
IUUC-Ame-011950	Astyanax mexicanus	40.51	0.00e+00	670.00
IUUC-Bta-012489	Bos taurus	50.38	0.00e+00	869.00
IUUC-Cel-018230	Caenorhabditis elegans	28.41	2.00e-63	238.00
IUUC-Cja-018716	Callithrix jacchus	50.38	0.00e+00	879.00
IUUC-Cfa-020269	Canis familiaris	49.95	0.00e+00	891.00
IUUC-Cpo-022507	Cavia porcellus	48.65	0.00e+00	835.00
IUUC-Csa-024209	Chlorocebus sabaeus	51.03	0.00e+00	880.00
IUUC-Cho-025104	Choloepus hoffmanni	48.59	0.00e+00	705.00
IUUC-Cin-025792	Ciona intestinalis	32.70	1.00e-83	304.00
IUUC-Cgl-026385	Colletotrichum gloeosporioides	24.52	5.00e-22	100.00
IUUC-Dno-028954	Dasypus novemcinctus	48.87	0.00e+00	819.00
IUUC-Eca-034039	Equus caballus	49.78	0.00e+00	878.00
IUUC-Eeu-035009	Erinaceus europaeus	57.09	5.00e-171	594.00
IUUC-Fca-036169	Felis catus	51.79	0.00e+00	903.00
IUUC-Fal-037579	Ficedula albicollis	49.10	0.00e+00	832.00
IUUC-Ggo-045318	Gorilla gorilla	51.47	0.00e+00	833.00
IUUC-Hsa-046671	Homo sapiens	51.14	0.00e+00	864.00
IUUC-Itr-047996	Ictidomys tridecemlineatus	47.95	0.00e+00	821.00
IUUC-Lch-050461	Latimeria chalumnae	51.89	0.00e+00	914.00
IUUC-Loc-052582	Lepisosteus oculatus	47.97	0.00e+00	846.00
IUUC-Laf-054324	Loxodonta africana	49.68	0.00e+00	860.00
IUUC-Mcc-055390	Macaca mulatta	51.25	0.00e+00	883.00
IUUC-Meu-056365	Macropus eugenii	44.08	2.00e-123	436.00
IUUC-Mmr-061407	Microcebus murinus	50.82	0.00e+00	905.00
IUUC-Mmu-063939	Mus musculus	48.42	0.00e+00	873.00
IUUC-Mpu-066226	Mustela putorius furo	52.12	0.00e+00	859.00
IUUC-Mlu-068092	Myotis lucifugus	51.95	0.00e+00	872.00
IUUC-Nfi-068405	Neosartorya fischeri	26.20	1.00e-26	115.00
IUUC-Opr-070246	Ochotona princeps	45.22	2.00e-116	413.00
IUUC-Oan-072742	Ornithorhynchus anatinus	52.06	0.00e+00	783.00
IUUC-Ocu-073959	Oryctolagus cuniculus	49.03	0.00e+00	860.00
IUUC-Oga-089173	Otolemur garnettii	50.22	0.00e+00	859.00
IUUC-Oar-089369	Ovis aries	49.89	0.00e+00	859.00
IUUC-Ptr-091032	Pan troglodytes	51.14	0.00e+00	864.00
IUUC-Pan-092383	Papio anubis	51.08	0.00e+00	880.00
IUUC-Psi-093432	Pelodiscus sinensis	52.47	0.00e+00	966.00
IUUC-Pma-094367	Petromyzon marinus	40.78	9.00e-109	387.00
IUUC-Pab-098416	Pongo abelii	51.88	0.00e+00	825.00
IUUC-Pca-101006	Procavia capensis	55.44	3.00e-123	436.00
IUUC-Pva-102966	Pteropus vampyrus	51.41	0.00e+00	890.00
IUUC-Rno-105059	Rattus norvegicus	47.73	2.00e-160	559.00
IUUC-Ssl-108450	Sclerotinia sclerotiorum	32.23	7.00e-05	44.30
IUUC-Sar-113202	Sorex araneus	46.49	0.00e+00	669.00
IUUC-Ssc-116120	Sus scrofa	50.27	0.00e+00	850.00
IUUC-Tgu-117314	Taeniopygia guttata	48.36	0.00e+00	830.00
IUUC-Tsy-119453	Tarsius syrichta	53.23	6.00e-152	531.00
IUUC-Tre-122194	Trichoderma reesei	25.13	2.00e-25	112.00
IUUC-Ttr-128421	Tursiops truncatus	49.28	0.00e+00	710.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence